Relevant bibliographies by topics / Multilocus phylogeny

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  1. Journal articles
  2. Dissertations / Theses

Academic literature on the topic 'Multilocus phylogeny'

Author: Grafiati
Published: 4 June 2021
Last updated: 26 July 2025

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Journal articles on the topic "Multilocus phylogeny"

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Tang, Mo-Shih, Chi-Chu Tsai†, Yuen-Po Yang, Chiou-Rong Sheue, and Shih-Hui Liu. "A Multilocus Phylogeny of Daphniphyllum (Daphniphyllaceae)." Annals of the Missouri Botanical Garden 107 (April 20, 2022): 137–52. http://dx.doi.org/10.3417/2022623.

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The monogeneric Daphniphyllaceae contain 36 taxa in the genus Daphniphyllum Blume that are endemic to Southeast Asia. Daphniphyllum is a morphologically homogeneous group of evergreen shrubs to trees divided into three sections: Daphniphyllum, Lunata T. C. Huang, and Staminodia Hurusawa. While the medicinal value of the Daphniphyllaceae has been explored in many studies, the understanding of their evolutionary history and infrageneric classification is still limited. To test the infrageneric classification and to examine evolutionary and classification hypotheses proposed by previous taxonomic
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Bischoff, Joseph F., Stephen A. Rehner, and Richard A. Humber. "A multilocus phylogeny of the Metarhizium anisopliae lineage." Mycologia 101, no. 4 (2009): 512–30. http://dx.doi.org/10.3852/07-202.

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Bonaccorso, Elisa, and A. Townsend Peterson. "A multilocus phylogeny of New World jay genera." Molecular Phylogenetics and Evolution 42, no. 2 (2007): 467–76. http://dx.doi.org/10.1016/j.ympev.2006.06.025.

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Patterson, S. A., J. A. Morris-Pocock, and V. L. Friesen. "A multilocus phylogeny of the Sulidae (Aves: Pelecaniformes)." Molecular Phylogenetics and Evolution 58, no. 2 (2011): 181–91. http://dx.doi.org/10.1016/j.ympev.2010.11.021.

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Couto, Diogo R., Philippe Bouchet, Yuri I. Kantor, Luiz R. L. Simone, and Gonzalo Giribet. "A multilocus molecular phylogeny of Fasciolariidae (Neogastropoda: Buccinoidea)." Molecular Phylogenetics and Evolution 99 (June 2016): 309–22. http://dx.doi.org/10.1016/j.ympev.2016.03.025.

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Buyck, Bart, Frank Kauff, Guillaume Eyssartier, André Couloux, and Valérie Hofstetter. "A multilocus phylogeny for worldwide Cantharellus (Cantharellales, Agaricomycetidae)." Fungal Diversity 64, no. 1 (2013): 101–21. http://dx.doi.org/10.1007/s13225-013-0272-3.

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Baeza, J. Antonio, Raymond T. Bauer, Junji Okuno, and Martin Thiel. "Molecular phylogeny of hinge-beak shrimps (Decapoda: Caridea: Rhynchocinetes and Cinetorhynchus) and allies: a formal test of familiar and generic monophyly using a multilocus phylogeny." Zoological Journal of the Linnean Society 172, no. 2 (2014): 426–50. https://doi.org/10.1111/zoj.12173.

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Baeza, J. Antonio, Bauer, Raymond T., Okuno, Junji, Thiel, Martin (2014): Molecular phylogeny of hinge-beak shrimps (Decapoda: Caridea: Rhynchocinetes and Cinetorhynchus) and allies: a formal test of familiar and generic monophyly using a multilocus phylogeny. Zoological Journal of the Linnean Society 172 (2): 426-450, DOI: 10.1111/zoj.12173, URL: http://doi.wiley.com/10.1111/zoj.12173
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Hidayat, Iman, Lita Citra Dewi, and Dalia Sukmawati. "Antagonistic activity of three Aspergillus isolates against Fusarium wilt of banana." Journal of Microbial Systematics and Biotechnology 1, no. 1 (2019): 1–10. http://dx.doi.org/10.37604/jmsb.v1i1.16.

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Endophytic fungi have been known to play a role in protecting their host plants against diseases and extreme environments. The purpose of this study was to determine the antagonistic activity of three Aspergillus isolates against F. oxysporum f. sp. cubense (Foc), and to identify the Aspergillus identity using multilocus phylogeny analysis. Antagonistic assay by dual culture method showed that the Aspergillus sp. strain PD2, strain PD4, and strain PD5 inhibited the growth of Foc isolate by 37.31%, 26.52%, and 12.04%, respectively. Multilocus phylogeny based on ITS rDNA, beta-tubulin, and calmo
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Tineo, Daniel, Danilo E. Bustamante, Martha S. Calderon, Jani E. Mendoza, Eyner Huaman, and Manuel Oliva. "An integrative approach reveals five new species of highland papayas (Caricaceae, Vasconcellea) from northern Peru." PLOS ONE 15, no. 12 (2020): e0242469. http://dx.doi.org/10.1371/journal.pone.0242469.

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The assignment of accurate species names is crucial, especially for those with confirmed agronomic potential such as highland papayas. The use of additional methodologies and data sets is recommended to establish well-supported boundaries among species of Vasconcellea. Accordingly, six chloroplast (trnL-trnF, rpl20-rps12, psbA-trnH intergenic spacers, matK and rbcL genes) and nuclear (ITS) markers were used to delimit species in the genus Vasconcellea using phylogeny and four DNA-based methods. Our results demonstrated congruence among different methodologies applied in this integrative study
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Orsini, L., S. Huttunen, and C. Schlötterer. "A multilocus microsatellite phylogeny of the Drosophila virilis group." Heredity 93, no. 2 (2004): 161–65. http://dx.doi.org/10.1038/sj.hdy.6800487.

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Dissertations / Theses on the topic "Multilocus phylogeny"

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Von, Plettenberg Laing Anthony. "A multilocus phylogeny of the cobra clade elapids." Thesis, Bangor University, 2018. https://research.bangor.ac.uk/portal/en/theses/a-multilocus-phylogeny-of-the-cobra-clade-elapids(ec29bf39-abb5-4a49-ba2d-a5a7d5e9acaf).html.

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The extant medically and socially important cobras have been the subject to several comparative taxonomic studies since the 1940s, but still lack an inclusive and thorough phylogenetic tree. With recent major advancements in phylogenetic analysis, it is now common to use multiple independent loci for studying the phylogenetic relationships within groups. For the first time, 27 from the 29 identified Naja species, alongside 5 putative new or elevated species had 4426 base pairs across 1701 sequences of mitochondrial and nuclear DNA sequence data analysed. The results continue to support the mon
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Cerezer, Vinícius Godoy. "Caracterização fenotípica e filogenética de isolados nosocomiais e linhagens clínicas Stenotrophomonas maltophilia." Universidade de São Paulo, 2013. http://www.teses.usp.br/teses/disponiveis/5/5141/tde-09082013-105539/.

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O gênero Stenotrophomonas inclui doze espécies de bactérias Gram- negativas, não fermentadoras, que podem ser encontradas no ambiente. Até o presente, S. maltophilia é a única espécie com linhagens que são patógenos oportunistas em seres humanos. Essa espécie tem ganhado importância clínica por estar envolvida em um crescente número de infecções em pacientes imunodeprimidos e em UTI neonatais, apresentando altas taxas de morbimortalidade. Isolados ambientais e clínicos de S. maltophilia compartilham 85% de homologia genômica, podendo ser a diferença uma consequência da adaptação da bactéria ao
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LOPES, Luiz Henrique Rocha. "Caracterização biológica, morfológica e molecular de isolados de Colletotrichum spp. associados à antracnose da cebola." Universidade Federal Rural de Pernambuco, 2015. http://www.tede2.ufrpe.br:8080/tede2/handle/tede2/6618.

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Submitted by (lucia.rodrigues@ufrpe.br) on 2017-03-21T14:38:30Z No. of bitstreams: 1 Luiz Henrique Rocha Lopes.pdf: 2118185 bytes, checksum: 93ff9ca19a00eb532e526f9d4c773b3a (MD5)<br>Made available in DSpace on 2017-03-21T14:38:30Z (GMT). No. of bitstreams: 1 Luiz Henrique Rocha Lopes.pdf: 2118185 bytes, checksum: 93ff9ca19a00eb532e526f9d4c773b3a (MD5) Previous issue date: 2015-07-27<br>One of the main onion crop diseases in Brazil is anthracnose, caused by especies of genus Colletotrichum. In this work it was used several Colletotrichum isolates obtained from plants do Allium genus with s
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Bragança, Carlos Augusto Dórea. "Molecular characterization of Colletotrichum spp. associated with fruits in Brazil." Universidade de São Paulo, 2013. http://www.teses.usp.br/teses/disponiveis/11/11135/tde-23042013-154938/.

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Colletotrichum species are considered one of the most economically important plant pathogens. They cause many losses in tropical, subtropical and temperate regions affecting a wide range of plant species. In tropical and subtropical regions C. gloeosporioides and C. acutatum are associated with significant losses on pre and post-harvest anthracnoses. There are still many features to understand about Colletotrichum biology and its systematics. The accurate identification of species involved with each anthracnose is of high relevance to establish management strategies to control the disease. Alt
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Ferreira, Rafael Fransak. "Filogenia do Complexo Drosophila Buzzatii (Grupo Repleta): Inferências de Análises Multilocus Mitocondriais e Nucleares." Universidade de São Paulo, 2011. http://www.teses.usp.br/teses/disponiveis/17/17135/tde-26092011-154314/.

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O complexo Drosophila buzzatii (grupo repleta) compreende 13 espécies, divididas em três clusters, de acordo com o bandeamento observado nos cromossomos politênicos: cluster D. stalkeri, incluindo D. richardsoni e D. stalkeri, restrito às ilhas do Caribe e Flórida; cluster D. martensis, incluindo D. martensis, D. uniseta, D. venezolana e D. starmeri, encontrado em áreas desérticas da Colômbia e Venezuela; e cluster D. buzzatii, incluindo D. buzzatii, D. koepferae, D. antonietae, D. serido, D. gouveai, D. borborema e D. seriema, habitando regiões sazonalmente secas ao longo da diagonal de veget
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LIMA, Nelson Bernardi. "Etiologia e epidemiologia das espécies de Colletotrichum relacionadas com a antracnose em frutos de mangueira no nordeste brasileiro." Universidade Federal Rural de Pernambuco, 2013. http://www.tede2.ufrpe.br:8080/tede2/handle/tede2/6677.

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Submitted by (lucia.rodrigues@ufrpe.br) on 2017-03-27T11:47:52Z No. of bitstreams: 1 Nelson Bernardi Lima.pdf: 1199005 bytes, checksum: e9e20cedc57b8c67aeeb8980dcfd13fb (MD5)<br>Made available in DSpace on 2017-03-27T11:47:52Z (GMT). No. of bitstreams: 1 Nelson Bernardi Lima.pdf: 1199005 bytes, checksum: e9e20cedc57b8c67aeeb8980dcfd13fb (MD5) Previous issue date: 2013-02-20<br>Colletotrichum species are the most important and widespread form of decay affecting mango fruit worldwide. In this study, Colletotrichum species associated with fruit anthracnose isolated from mango in northeastern
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Azevedo, Helton de. "Base de dados para identificação taxonômica e filogenética de espécies do gênero Bradyrhizobium usando a metodologia de Multilocus sequence analysis." Universidade Tecnológica Federal do Paraná, 2015. http://repositorio.utfpr.edu.br/jspui/handle/1/3094.

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Algumas bactérias específicas denominadas coletivamente de rizóbios são capazes de formar nódulos em raízes de leguminosas como o feijoeiro e a soja; o resultado desta associação é um processo biológico que torna possível fixar nitrogênio atmosférico no solo. A fixação biológica do nitrogênio é um processo chave para a agricultura e para o ambiente, permitindo a substituição de fertilizantes nitrogenados, reduzindo a poluição da água por nitrato, bem como a emissão de gases de efeito estufa. Os solos contêm inúmeras estirpes pertencentes ao gênero Bradyrhizobium, que estabelecem simbiose com u
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Carvalho, Ludmilla Tonani. "Caracterização do perfil de susceptibilidade de isolados clínicos de Neoscytalidium dimidiatum e N. dimidiatum var. hyalinum aos antifúngicos e a fotossensibilizadores." Universidade de São Paulo, 2015. http://www.teses.usp.br/teses/disponiveis/17/17131/tde-20072016-083551/.

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O gênero Neoscytalidium está crescentemente sendo associado às infecções superficiais e profundas causadas em pacientes imunocomprometidos e imunocompetentes. O fungo filamentoso Neoscytalidium dimidiatum é um microrganismo saprofítico e fitopatogênico, encontrado no solo e vegetação de regiões de clima tropical e subtropical. N. dimidiatum var. hyalinum e N. dimidiatum estão envolvidos em infecções superficiais de pele e unha sendo que a espécie produtora de melanina, N. dimidiatum, está associado preferencialmente a infecções profundas sugerindo que a espécie variante não produtora de melani
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Ντουντούμης, Ευάγγελος. "Χαρακτηρισμός των συμβιωτικών σχέσεων του βακτηρίου Wolbachia με έντομα αγροτικής, δασικής και ιατρικής σημασίας". Thesis, 2014. http://hdl.handle.net/10889/7939.

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Το βακτήριο Wolbachia είναι ένα ενδοκυττάριο και μητρικά κληρονομούμενο συμβιωτικό βακτήριο. Ανήκει στην ομοταξία των Alphaproteobacteria και την τάξη των Rickettsiales. Αποτελεί ίσως τον πιο διαδεδομένο ενδοκυττάριο συμβιωτικό οργανισμό στον πλανήτη, καθώς έχει εντοπιστεί μέχρι στιγμής σε πληθώρα αρθροπόδων και νηματωδών της φιλαρίασης. Πρόσφατες μελέτες εκτιμούν ότι πάνω από το 40% των ειδών αρθροπόδων είναι μολυσμένα με το βακτήριο Wolbachia. Το συμβιωτικό αυτό βακτήριο επηρεάζει τις βιολογικές λειτουργίες και ιδιότητες των ξενιστών του και είναι υπεύθυνο για μια σειρά αναπαραγωγικών ανωμαλ
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