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Journal articles on the topic 'Myxococcaceae'

Author: Grafiati

Published: 4 June 2021

Last updated: 26 July 2025

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1

Whitworth, David E., and Allison Zwarycz. "A Genomic Survey of Signalling in the Myxococcaceae." Microorganisms 8, no. 11 (2020): 1739. http://dx.doi.org/10.3390/microorganisms8111739.

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As prokaryotes diverge by evolution, essential ‘core’ genes required for conserved phenotypes are preferentially retained, while inessential ‘accessory’ genes are lost or diversify. We used the recently expanded number of myxobacterial genome sequences to investigate the conservation of their signalling proteins, focusing on two sister genera (Myxococcus and Corallococcus), and on a species within each genus (Myxococcus xanthus and Corallococcus exiguus). Four new C. exiguus genome sequences are also described here. Despite accessory genes accounting for substantial proportions of each myxobac

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Chambers, James, Natalie Sparks, Natashia Sydney, Paul G. Livingstone, Alan R. Cookson, and David E. Whitworth. "Comparative Genomics and Pan-Genomics of the Myxococcaceae, including a Description of Five Novel Species: Myxococcus eversor sp. nov., Myxococcus llanfairpwllgwyngyllgogerychwyrndrobwllllantysiliogogogochensis sp. nov., Myxococcus vastator sp. nov., Pyxidicoccus caerfyrddinensis sp. nov., and Pyxidicoccus trucidator sp. nov." Genome Biology and Evolution 12, no. 12 (2020): 2289–302. https://doi.org/10.1093/gbe/evaa212.

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Chambers, James, Sparks, Natalie, Sydney, Natashia, Livingstone, Paul G, Cookson, Alan R, Whitworth, David E (2020): Comparative Genomics and Pan-Genomics of the Myxococcaceae, including a Description of Five Novel Species: Myxococcus eversor sp. nov., Myxococcus llanfairpwllgwyngyllgogerychwyrndrobwllllantysiliogogogochensis sp. nov., Myxococcus vastator sp. nov., Pyxidicoccus caerfyrddinensis sp. nov., and Pyxidicoccus trucidator sp. nov. Genome Biology and Evolution 12 (12): 2289-2302, DOI: 10.1093/gbe/evaa212, URL: http://dx.doi.org/10.1093/gbe/evaa212

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3

Petters, Sebastian, Verena Groß, Andrea Söllinger, et al. "The soil microbial food web revisited: Predatory myxobacteria as keystone taxa?" ISME Journal 15, no. 9 (2021): 2665–75. http://dx.doi.org/10.1038/s41396-021-00958-2.

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AbstractTrophic interactions are crucial for carbon cycling in food webs. Traditionally, eukaryotic micropredators are considered the major micropredators of bacteria in soils, although bacteria like myxobacteria and Bdellovibrio are also known bacterivores. Until recently, it was impossible to assess the abundance of prokaryotes and eukaryotes in soil food webs simultaneously. Using metatranscriptomic three-domain community profiling we identified pro- and eukaryotic micropredators in 11 European mineral and organic soils from different climes. Myxobacteria comprised 1.5–9.7% of all obtained

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Chambers, James, Natalie Sparks, Natashia Sydney, Paul G. Livingstone, Alan R. Cookson, and David E. Whitworth. "Comparative Genomics and Pan-Genomics of the Myxococcaceae, including a Description of Five Novel Species: Myxococcus eversor sp. nov., Myxococcus llanfairpwllgwyngyllgogerychwyrndrobwllllantysiliogogogochensis sp. nov., Myxococcus vastator sp. nov., Pyxidicoccus caerfyrddinensis sp. nov., and Pyxidicoccus trucidator sp. nov." Genome Biology and Evolution 12, no. 12 (2020): 2289–302. http://dx.doi.org/10.1093/gbe/evaa212.

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Abstract Members of the predatory Myxococcales (myxobacteria) possess large genomes, undergo multicellular development, and produce diverse secondary metabolites, which are being actively prospected for novel drug discovery. To direct such efforts, it is important to understand the relationships between myxobacterial ecology, evolution, taxonomy, and genomic variation. This study investigated the genomes and pan-genomes of organisms within the Myxococcaceae, including the genera Myxococcus and Corallococcus, the most abundant myxobacteria isolated from soils. Previously, ten species of Corallo

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Hernández-Zulueta, Joicye, Leopoldo Díaz-Pérez, Alex Echeverría-Vega, Gabriela Georgina Nava-Martínez, Miguel Ángel García-Salgado, and Fabián A. Rodríguez-Zaragoza. "An Update of Knowledge of the Bacterial Assemblages Associated with the Mexican Caribbean Corals Acropora palmata, Orbicella faveolata, and Porites porites." Diversity 15, no. 9 (2023): 964. http://dx.doi.org/10.3390/d15090964.

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In this study, the bacterial microbiota associated with apparently healthy corals of Acropora palmata, Orbicella faveolata, and Porites porites and the surrounding seawater and sediment were evaluated via the MiSeq Illumina sequencing of the V4 region of 16S rRNA at three reef sites in the Mexican Caribbean. Bacterial assemblages associated with apparently healthy corals and sediments showed no significant differences between sites. The colonies of A. palmata showed a dominance of families Amoebophilaceae, Spirochaetaceae, Myxococcaceae, and Cyclobacteriaceae. Meanwhile, the colonies of O. fav

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Ahearne, Andrew, Hanan Albataineh, Scot E. Dowd, and D. Cole Stevens. "Assessment of Evolutionary Relationships for Prioritization of Myxobacteria for Natural Product Discovery." Microorganisms 9, no. 7 (2021): 1376. http://dx.doi.org/10.3390/microorganisms9071376.

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Discoveries of novel myxobacteria have started to unveil the potentially vast phylogenetic diversity within the family Myxococcaceae and have brought about an updated approach to myxobacterial classification. While traditional approaches focused on morphology, 16S gene sequences, and biochemistry, modern methods including comparative genomics have provided a more thorough assessment of myxobacterial taxonomy. Herein, we utilize long-read genome sequencing for two myxobacteria previously classified as Archangium primigenium and Chondrococcus macrosporus, as well as four environmental myxobacter

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7

Garcia, Ronald, and Rolf Müller. "Simulacricoccus ruber gen. nov., sp. nov., a microaerotolerant, non-fruiting, myxospore-forming soil myxobacterium and emended description of the family Myxococcaceae." International Journal of Systematic and Evolutionary Microbiology 68, no. 10 (2018): 3101–10. http://dx.doi.org/10.1099/ijsem.0.002936.

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8

Zhou, Yang, Shuoxing Yi, Yi Zang, Qing Yao, and Honghui Zhu. "The Predatory Myxobacterium Citreicoccus inhibens gen. nov. sp. nov. Showed Antifungal Activity and Bacteriolytic Property against Phytopathogens." Microorganisms 9, no. 10 (2021): 2137. http://dx.doi.org/10.3390/microorganisms9102137.

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The application and promotion of biological control agents are limited because of poor efficacy and unstable performance in the field. Screening microorganisms with high antagonistic activity, effective adaptability, and high field-survival should be prospected. Myxobacteria are soil predatory bacteria with wide adaptability, which are considered as good antagonists. Here, we report a myxobacterium strain M34 isolated from subtropical forest soil in South China using the Escherichia coli baiting method. Based on the morphological observation, physiological test, biochemical characteristics, 16

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Sanford, Robert A., James R. Cole, and James M. Tiedje. "Characterization and Description of Anaeromyxobacter dehalogenans gen. nov., sp. nov., an Aryl-Halorespiring Facultative Anaerobic Myxobacterium." Applied and Environmental Microbiology 68, no. 2 (2002): 893–900. http://dx.doi.org/10.1128/aem.68.2.893-900.2002.

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ABSTRACT Five strains were isolated which form a physiologically and phylogenetically coherent group of chlororespiring microorganisms and represent the first taxon in the Myxobacteria capable of anaerobic growth. The strains were enriched and isolated from various soils and sediments based on their ability to grow using acetate as an electron donor and 2-chlorophenol (2-CPh) as an electron acceptor. They are slender gram-negative rods with a bright red pigmentation that exhibit gliding motility and form spore-like structures. These unique chlororespiring myxobacteria also grow with 2,6-dichlo

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10

Sood, Sakshi, Ram Prasad Awal, Joachim Wink, et al. "Aggregicoccus edonensis gen. nov., sp. nov., an unusually aggregating myxobacterium isolated from a soil sample." International Journal of Systematic and Evolutionary Microbiology 65, Pt_3 (2015): 745–53. http://dx.doi.org/10.1099/ijs.0.061176-0.

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A novel myxobacterium, MCy1366T (Ar1733), was isolated in 1981 from a soil sample collected from a region near Tokyo, Japan. It displayed general myxobacterial features like Gram-negative-staining, rod-shaped vegetative cells, gliding on solid surfaces, microbial lytic activity, fruiting-body-like aggregates and myxospore-like structures. The strain was mesophilic, aerobic and showed a chemoheterotrophic mode of nutrition. It was resistant to many antibiotics such as cephalosporin C, kanamycin, gentamicin, hygromycin B, polymyxin and bacitracin, and the key fatty acids of whole cell hydrolysat

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11

Karasartova, Djursun, Gonul Arslan-Akveran, Sabiha Sensoz, Kosta Y. Mumcuoglu, and Aysegul Taylan-Ozkan. "Hirudo verbana Microbiota Dynamics: A Key Factor in Hirudotherapy-Related Infections?" Microorganisms 13, no. 4 (2025): 918. https://doi.org/10.3390/microorganisms13040918.

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The gastrointestinal microbiota of medicinal leeches is particularly interesting due to their blood-feeding habits, increasing medical use, and risk of pathogen transmission. Three groups of Hirudo verbana were used to study the leech microbiota: farmed leeches fasting for a long time, farmed leeches recently fed with bovine blood, and wild specimens fed with amphibian blood. The microbiota of the leeches’ mouth, pharynx, crop, and intestine was analyzed. Metasequencing analyses were performed using amplification of the 16S rRNA V3-V4 region on a NovaSeq Illumina platform. The relative abundan

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12

Lang, Elke, Peter Schumann, Brian J. Tindall, Kathrin I. Mohr, and Cathrin Spröer. "Reclassification of Angiococcus disciformis, Cystobacter minus and Cystobacter violaceus as Archangium disciforme comb. nov., Archangium minus comb. nov. and Archangium violaceum comb. nov., unification of the families Archangiaceae and Cystobacteraceae, and emended descriptions of the families Myxococcaceae and Archangiaceae." International Journal of Systematic and Evolutionary Microbiology 65, Pt_11 (2015): 4032–42. http://dx.doi.org/10.1099/ijsem.0.000533.

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The species Archangium gephyra, Angiococcus disciformis, Cystobacter minus and Cystobacter violaceus are currently classified in three different genera of the order Myxococcales. The 16S rRNA gene sequences of the respective type strains show a similarity higher than 98.4 % and form a tight phylogenetic group. A dendrogram calculating the similarity of MALDI-TOF spectra confirmed the close relatedness of the four species that grouped in a monophyletic cluster in the neighbourhood of other species of the genus Cystobacter. The type strains shared similar fatty acid patterns of high complexity w

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13

Jo, Jung-Hun, Seung-Bum Kim, Ji-Eun Im, and Se-Yoon Chun and Wan-Taek Im. "Description of 41 unrecorded bacterial species in Korea, isolated from freshwater in 2021." Journal of Species Research 13, no. 4 (2024): 353–66. https://doi.org/10.12651/JSR.2024.13.4.353.

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Jo, Jung-Hun, Kim, Seung-Bum, Im, Ji-Eun, Im, Se-Yoon Chun and Wan-Taek (2024): Description of 41 unrecorded bacterial species in Korea, isolated from freshwater in 2021. Journal of Species Research 13 (4): 353-366, DOI: 10.12651/JSR.2024.13.4.353

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14

Walesch, Sebastian, Ronald Garcia, Abdelhalim B. Mahmoud, et al. "New myxobacteria of the Myxococcaceae clade produce angiolams with antiparasitic activities." Microbiology Spectrum, February 2024. http://dx.doi.org/10.1128/spectrum.03689-23.

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ABSTRACT In the past century, microbial natural products have proven themselves to be substantial and fruitful sources of anti-infectives. In addition to the well-studied Actinobacteria, understudied bacterial taxa like the Gram-negative myxobacteria have increasingly gained attention in the ongoing search for novel and biologically active natural products. In the course of a regional sampling campaign to source novel myxobacteria, we recently uncovered new myxobacterial strains MCy12716 and MCy12733 belonging to the Myxococcaceae clade. Early bioactivity screens of the bacterial extracts reve

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15

Jain, Shruti, and Gaurav Sharma. "Putative evolution of Myxococcus fulvus 124B02 plasmid pMF1 from a chromosomal segment in another Myxococcus species." Microbiology Spectrum, November 15, 2024. http://dx.doi.org/10.1128/spectrum.01206-24.

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ABSTRACT Myxobacteria or order Myxococcales (old nomenclature) or phylum Myxococcota (new terminology) are fascinating organisms well known for their diverse peculiar physiological, taxonomic, and genomic properties. Researchers have long sought to identify plasmids within these organisms, yet thus far, only two organisms from different families have been found to harbor a plasmid. This study delves into the putative evolution of one of these plasmids, i.e., pMF1 present in Myxococcus fulvus 124B02 in the suborder Cystobacterineae and family Myxococcaceae. Here, we first reannotated the pMF1 p

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16

Dror, Barak, Hildah Amutuhaire, Omer Frenkel, Edouard Jurkevitch, and Eddie Cytryn. "Identification of bacterial populations and functional mechanisms potentially involved in biochar-facilitated antagonism of the soilborne pathogen Fusarium oxysoporum." Phytobiomes Journal, February 5, 2022. http://dx.doi.org/10.1094/pbiomes-11-21-0071-r.

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Biochar soil amendment alleviates plant disease through microbial-mediated processes, but drivers facilitating this "biochar effect" are not fully understood. In this study, cucumbers were inoculated with and without the fungus Fusarium oxysporum f.sp. radicis-cucumerinum (FORC) in either biochar-amended or non-amended soils, and disease severity was assessed. Amplicon sequencing and shotgun metagenomics were then applied to identify bacteria and associated mechanisms potentially involved in pathogen inhibition, and candidate bacteria were tested for in-vitro FORC-antagonizing capacity. Biocha

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17

Carrascosa-Robles, Ángel, José Antonio Pascual, Jessica Cuartero, Ana de Santiago, Spyridon A. Petropoulos, and María del Mar Alguacil. "Optimizing purslane cultivation through legume intercropping and crop rotation: a study on yield and rhizosphere bacterial communities." Plant and Soil, December 2, 2024. https://doi.org/10.1007/s11104-024-07061-3.

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Abstract Aims Mixed cropping systems such as intercropping and crop rotation have been proven to be sustainable agronomic tools that provide agro-ecological services and improve crop yield through soil physical, chemical and biological changes in the soil. In this study, we aimed to assess the impact of different mixed cropping systems on a crop well-adapted to high temperatures and low precipitation, like purslane (Portulaca oleracea L.) and to study the underlying microbial mechanisms involved. Methods A field experiment in a semiarid region of southern Spain was conducted to study the short

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18

Saraf, Niharika, and Gaurav Sharma. "Comparative genomic insight into the myxobacterial carbohydrate-degrading potential." Frontiers in Microbiology 16 (May 7, 2025). https://doi.org/10.3389/fmicb.2025.1550287.

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Myxobacteria are an intriguing group of social-behavior-depicting microbes with unique physiological characteristics such as fruiting body formation, gliding motility, and predation, encompassing the largest genomes (&gt;9 Mb) within the Eubacteria kingdom. These soil-dwelling organisms are crucial for lignocellulosic biomass degradation, which has both ecological and industrial significance. While previous studies have demonstrated polysaccharide deconstruction abilities in a few myxobacterial species, we aim to elucidate the distribution of their Carbohydrate Active Enzymes (CAZymes) dom

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19

Trzebny, Artur, Abigail D. Taylor, Jeremy K. Herren, Johanna K. Björkroth, Sylwia Jedut, and Miroslawa Dabert. "Microsporidian infection of mosquito larvae changes the host-associated microbiome towards the synthesis of antimicrobial factors." Parasites & Vectors 18, no. 1 (2025). https://doi.org/10.1186/s13071-025-06813-z.

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Abstract Background Microsporidians (Microsporidia) are a group of obligate intracellular parasites that commonly infect mosquitoes. Recently, it has been shown that infection by these parasites can alter the composition and functionality of the mosquito-associated microbiome. The host-associated microbiome of the mosquito can play a pivotal role in various physiological processes of this host, including its vector competence for pathogens. Thus, understanding how microsporidians shape the mosquito microbiome may be crucial for elucidating interactions between these parasites and their mosquit

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20

Sun, Hongping, Wenyu Hu, Yuxin Dai, et al. "Moso bamboo (Phyllostachys edulis (Carrière) J. Houzeau) invasion affects soil microbial communities in adjacent planted forests in the Lijiang River basin, China." Frontiers in Microbiology 14 (February 21, 2023). http://dx.doi.org/10.3389/fmicb.2023.1111498.

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IntroductionMoso bamboo (Phyllostachys edulis (Carrière) J. Houz.), the most widely distributed economic bamboo species in southern China, can easily invade adjacent communities due to its clonal reproduction. However, there is little information on the effects of its establishment and expansion to adjacent forest soil communities, particularly in planted forests.MethodsWe investigated the relationships between soil properties and the microbial community during bamboo invasion under different slope directions (shady or sunny slope) and positions (bottom, middle, or top slope), in three typical

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21

Chambers, James, Natalie Sparks, Natashia Sydney, Paul G. Livingstone, Alan R. Cookson, and David E. Whitworth. "Corrigendum to “Comparative genomics and pan-genomics of the Myxococcaceae, including a description of five novel species: Myxococcus eversor sp. nov., Myxococcus llanfairpwllgwyngyllgogerychwyrndrobwllllantysiliogogogochensis sp. nov., Myxococcus vastator sp. nov., Pyxidicoccus caerfyrddinensis sp. nov. and Pyxidicoccus trucidator sp. nov.” [Genome Biol. Evol. 12(12) (2020) 2289-2302]." Genome Biology and Evolution 13, no. 4 (2021). http://dx.doi.org/10.1093/gbe/evab040.

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