Academic literature on the topic 'NEDD8 E3 ligases'
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Journal articles on the topic "NEDD8 E3 ligases"
Furukawa, Manabu, Yanping Zhang, Joseph McCarville, Tomohiko Ohta, and Yue Xiong. "The CUL1 C-Terminal Sequence and ROC1 Are Required for Efficient Nuclear Accumulation, NEDD8 Modification, and Ubiquitin Ligase Activity of CUL1." Molecular and Cellular Biology 20, no. 21 (November 1, 2000): 8185–97. http://dx.doi.org/10.1128/mcb.20.21.8185-8197.2000.
Full textBaek, Kheewoong, Daniel C. Scott, and Brenda A. Schulman. "NEDD8 and ubiquitin ligation by cullin-RING E3 ligases." Current Opinion in Structural Biology 67 (April 2021): 101–9. http://dx.doi.org/10.1016/j.sbi.2020.10.007.
Full textKamada, Shinji. "Inhibitor of apoptosis proteins as E3 ligases for ubiquitin and NEDD8." BioMolecular Concepts 4, no. 2 (April 1, 2013): 161–71. http://dx.doi.org/10.1515/bmc-2012-0036.
Full textBenjamin, Sigi, and Hermann Steller. "Another Tier for Caspase Regulation: IAPs as NEDD8 E3 Ligases." Developmental Cell 19, no. 6 (December 2010): 791–92. http://dx.doi.org/10.1016/j.devcel.2010.11.014.
Full textKeuss, Matthew J., Yann Thomas, Robin Mcarthur, Nicola T. Wood, Axel Knebel, and Thimo Kurz. "Characterization of the mammalian family of DCN-type NEDD8 E3 ligases." Journal of Cell Science 129, no. 7 (February 18, 2016): 1441–54. http://dx.doi.org/10.1242/jcs.181784.
Full textBroemer, Meike, Tencho Tenev, Kristoffer T. G. Rigbolt, Sophie Hempel, Blagoy Blagoev, John Silke, Mark Ditzel, and Pascal Meier. "Systematic In Vivo RNAi Analysis Identifies IAPs as NEDD8-E3 Ligases." Molecular Cell 40, no. 5 (December 2010): 810–22. http://dx.doi.org/10.1016/j.molcel.2010.11.011.
Full textHjerpe, Roland, Yann Thomas, Jesse Chen, Aleksandra Zemla, Siobhan Curran, Natalia Shpiro, Lawrence R. Dick, and Thimo Kurz. "Changes in the ratio of free NEDD8 to ubiquitin triggers NEDDylation by ubiquitin enzymes." Biochemical Journal 441, no. 3 (January 16, 2012): 927–39. http://dx.doi.org/10.1042/bj20111671.
Full textZhou, Lihong, and Felicity Z. Watts. "Nep1, a Schizosaccharomyces pombe deneddylating enzyme." Biochemical Journal 389, no. 2 (July 5, 2005): 307–14. http://dx.doi.org/10.1042/bj20041991.
Full textAdhvaryu, Keyur K., Jordan D. Gessaman, Shinji Honda, Zachary A. Lewis, Paula L. Grisafi, and Eric U. Selker. "The Cullin-4 Complex DCDC Does Not Require E3 Ubiquitin Ligase Elements To Control Heterochromatin in Neurospora crassa." Eukaryotic Cell 14, no. 1 (October 31, 2014): 25–28. http://dx.doi.org/10.1128/ec.00212-14.
Full textOnel, Melis, Fidan Sumbul, Jin Liu, Ruth Nussinov, and Turkan Haliloglu. "Cullin neddylation may allosterically tune polyubiquitin chain length and topology." Biochemical Journal 474, no. 5 (February 20, 2017): 781–95. http://dx.doi.org/10.1042/bcj20160748.
Full textDissertations / Theses on the topic "NEDD8 E3 ligases"
Meszka, Igor. "Chemical biology approaches within the NEDD8 pathway." Thesis, Université de Montpellier (2022-….), 2022. http://www.theses.fr/2022UMONT015.
Full textUnderstanding how organisms respond to environmental stress has critical implications both on quality of life and treatment of diseases. Organisms have developed a series of sophisticated processes to detect and repair such damages. A family of small proteins called the family of Ubiquitin molecules (Ubls), play a critical role in many aspects of the stress response. Defects in components of the Ubiquitin family are often found in pathologic conditions including cancer and neurodegenerative diseases. Understanding how the ubiquitin family is involved in the cellular stress response is an important step in the understanding of this process and can lead to the development of novel therapeutic approaches to treat diseases caused by malfunction of this system.One of the Ubls that has the highest identity and similarity to Ubiquitin is NEDD8. NEDD8 works in a similar manner to Ub, using a distinct conjugation machinery. NEDD8 modification is essential for maintaining the homeostasis of the cell as it plays a major role in the regulation of viability, growth, and development. Because of that, many components of NEDD8 have been found deregulated in many cancers. NEDD8 can modify a wide range of substrate proteins, including itself, which results in the creation of polyNEDD8 chains. Recently the presence of polyNEDD8 chains has been linked to the regulation of cell death – apoptosis and parthanatos. Moreover, it has been recently reported that NEDD8 during proteotoxic stress can be employed by the Ub conjugation machinery. This results in the creation of hybrid NEDD8 chains where except for NEDD8, we can also find Ub and SUMO, as recent papers have shown that NEDD8 has the ability to modify Ub and SUMO-2. The presence of the hybrid NEDD8 chains was linked with the creation of nuclear aggregates formed during proteotoxic stress, which can play a potential protective role during stress exposure.Knowing how important the regulation of proteins through NEDDylation is, we were also aware of the lack of knowledge about the machinery that plays a role in the creation and deconjugation of different NEDD8 entities. So far two deNEDDylating enzymes were reported but no enzyme was tested for its ability to recognise and process the hybrid NEDD8 chains. Moreover, our knowledge about E3 ligases that are responsible for substrate NEDDylation, even though expanding, is still very limited. Additionally, NEDD8 having ten lysines through which it can modify itself, can generate a very broad range of signals through polyNEDD8 and hybrid NEDD8 chain formation, which can be recognised similarly to polyUb chains, yet no studies have focused on determining their interactors so far.In this work, we focused on exploring the beforementioned unknown elements of the NEDD8 conjugation and deconjugation machineries. Using chemical biology approaches we tested a variety of enzymes and determined that polyNEDD8 chains are exclusively processed by the NEDP1 enzyme, however, deconjugation of hybrid NEDD8 chains requires the coordinated action of different deconjugating enzymes with distinct specificity for Ub or SUMO. We also employed chemically synthesized NEDD8-NEDD8 and NEDD8-Ub dimers in order to look for their interactors and used the gathered data to deepen our knowledge about the biology of hybrid NEDD8 chains in nuclear aggregates. Using NEDD8-Dha probes we identified a group of proteins that are potentially involved in the NEDDylation machinery. Through biological confirmation of obtained results we have shown that tRNA ligases – GARS and SARS are working as NEDD8 E3 ligases. Moreover, RNF20 is also working as a NEDD8 E3 ligase responsible for NEDDylation of histone H2B but also PARP1 – one of the proteins that are key players in the formation of SG
Drinjakovic, Jovana. "E3 ligase Nedd4 regulates axon branching by downregulating PTEN." Thesis, University of Cambridge, 2009. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.611503.
Full textRuetalo, Buschinger Natalia [Verfasser], and Silke [Akademischer Betreuer] Wiesner. "Mechanisms underlying the regulation of Nedd4-family E3 Ubiquitin ligases / Natalia Ruetalo Buschinger ; Betreuer: Silke Wiesner." Tübingen : Universitätsbibliothek Tübingen, 2020. http://d-nb.info/1202774091/34.
Full textEscobedo, Pascual Albert. "Structural Insights into Substrate Binding and Regulation of E3 Ubiquitin Ligases in the Nedd4 Family using NMR Spectroscopy." Doctoral thesis, Universitat de Barcelona, 2014. http://hdl.handle.net/10803/284605.
Full textNedd4L és una E3 ubiquitín lligasa responsable de la regulació de la vida mitja del canal de sodi ß-ENaC i de Smad2/3, proteïnes mediadores de la ruta de senyalització activada per citocines TGF-ß. Defectes en la seva funció han estat relacionats amb la hipertensió hereditària (Síndrome de Liddle), i podrien ser rellevants en determinats tipus de càncer i metàstasi. CDK8/9 i GSK3-ß són dues quinases que regulen l’estat de fosforilació de les Smads, habilitant-les per dur a terme llur funció en cooperació amb factors de transcripció al mateix temps que les marquen per ser reconegudes per ubiquitín lligases. Amb l’objectiu d’identificar els residus i els patrons de fosforilació rellevants hem preparat un set de fosfopèptids que corresponen a les seqüències de Smad1/3. Nedd4L presenta una arquitectura multi-domini C2-WW-HECT. Diverses lligases de la família de Nedd4 existeixen en una conformació latent en què contactes inter-domini oclouen el lloc catalític en el domini HECT, involucrant bé el domini C2 (Smurf1/2, WWP2, Nedd4, Nedd4L) o la zona central amb els dominis WW (Itch). Certs esdeveniments cel•lulars desplacen aquests contactes, induint la transició a la conformació activa. L’increment dels nivells intracel•lulars de Ca2+ activa Nedd4L. La hidròlisi del fosfolípid de membrana PIP2 allibera l’IP3 provocant aquest increment. El domini C2 de Nedd4L interacciona tant amb el Ca2+ com amb l’IP3. Utilitzant l’RMN hem descrit els contactes HECT-C2 en la conformació latent i hem observat que el Ca2+ s’uneix al domini C2 amb alta afinitat utilitzant el mateix lloc d’unió, a més d’afavorir la interacció amb l’IP3. Així, hem aportat el fonament estructural per a l’activació i relocalització a la membrana cel•lular de Nedd4L. El domini HECT presenta un lloc PY altament conservat (HECT-PY). Els motius PY són reconeguts pels dominis WW. Proposem que el reconeixement del motiu HECT-PY per part d’un dels dominis WW de Nedd4L estigui implicat en l’auto-ubiquitinació. Hem observat que només quan el plegament del domini HECT està compromès, el lloc PY és accessible. Presentem l’estructura per RMN del complex WW3-HECT-PY. El motiu està protegit en molècules funcionals de Nedd4L, capaces de reconèixer-lo en molècules danyades i ubiquitinar-les.
Takeda, Michiko [Verfasser], Hiroshi [Akademischer Betreuer] Kawabe, Nils [Akademischer Betreuer] Brose, and Andreas [Akademischer Betreuer] Stumpner. "The Role of the E3 Ubiquitin Ligases Nedd4-1 and Nedd4-2 in Synaptic Transmission and Plasticity / Michiko Takeda. Gutachter: Nils Brose ; Andreas Stumpner. Betreuer: Hiroshi Kawabe." Göttingen : Niedersächsische Staats- und Universitätsbibliothek Göttingen, 2013. http://d-nb.info/104430779X/34.
Full textVisvalingam, Shivanthy Majella. "Regulation of growth, and insulin/TOR signalling by protein shuttling and the E3 ubiquitin protein ligase nedd4 in drosophila." Thesis, University of Oxford, 2008. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.510254.
Full textFiedorowicz, Katarzyna [Verfasser]. "Microgravity- and shear stress-mediated regulation of E3 ligase NEDD4 and its substrate Cx43 in endothelial cells / Katarzyna Fiedorowicz." Berlin : Freie Universität Berlin, 2013. http://d-nb.info/1032899344/34.
Full textAltas, Bekir [Verfasser], Nils [Akademischer Betreuer] Brose, Judith [Gutachter] Stegmüller, and Dirk [Gutachter] Goerlich. "Roles of the Nedd4 Family E3 Ligases in Glial Function and Nerve Cell Development / Bekir Altas ; Gutachter: Judith Stegmüller, Dirk Goerlich ; Betreuer: Nils Brose." Göttingen : Niedersächsische Staats- und Universitätsbibliothek Göttingen, 2017. http://d-nb.info/1131875710/34.
Full textHsia, Hung-En [Verfasser], Hiroshi [Akademischer Betreuer] Kawabe, Nils [Akademischer Betreuer] Brose, Judith [Akademischer Betreuer] Stegmüller, and Andreas [Akademischer Betreuer] Wodarz. "Roles of the HECT-Type Ubiquitin E3 Ligases of the Nedd4 and WWP Subfamilies in Neuronal Development / Hung-En Hsia. Gutachter: Nils Brose ; Judith Stegmüller ; Andreas Wodarz. Betreuer: Hiroshi Kawabe." Göttingen : Niedersächsische Staats- und Universitätsbibliothek Göttingen, 2015. http://d-nb.info/1071713493/34.
Full textSpiegelberg, Larissa [Verfasser], and Friedemann [Akademischer Betreuer] Weber. "Das Ubiquitin-Proteasom-System und die Ubiquitin-E3-Ligase Nedd4 sind involviert in den Abbau der RNA-Polymerase II durch den Virulenzfaktor NSs des La Crosse-Virus / Larissa Spiegelberg. Betreuer: Friedemann Weber." Marburg : Philipps-Universität Marburg, 2016. http://d-nb.info/1082347027/34.
Full textBook chapters on the topic "NEDD8 E3 ligases"
Butt, Ghazala, Ilhan Yaylim, Rukset Attar, Aliye Aras, Mirna Azalea Romero, Muhammad Zahid Qureshi, Jelena Purenovic, and Ammad Ahmad Farooqi. "NEDD4 Family of E3 Ubiquitin Ligases in Breast Cancer: Spotlight on SMURFs, WWPs and NEDD4." In Advances in Experimental Medicine and Biology, 365–75. Cham: Springer International Publishing, 2019. http://dx.doi.org/10.1007/978-3-030-20301-6_19.
Full textFu, Xiaoli, Jie Chu, Yuyin Li, Shasha Wang, Jie Zhou, Yujie Dai, and Aipo Diao. "Design, Synthesis, and Biological Evaluation of Nedd4 E3 Ubiquitin Ligase Small Molecule Inhibitors." In Proceedings of the 2012 International Conference on Applied Biotechnology (ICAB 2012), 1821–28. Berlin, Heidelberg: Springer Berlin Heidelberg, 2013. http://dx.doi.org/10.1007/978-3-642-37925-3_195.
Full textJing, Lei, Xin Huo, Yufeng Li, Yuyin Li, and Aipo Diao. "Identification of the Binding Domains of Nedd4 E3 Ubiquitin Ligase with Its Substrate Protein TMEPAI." In Lecture Notes in Electrical Engineering, 47–53. Berlin, Heidelberg: Springer Berlin Heidelberg, 2015. http://dx.doi.org/10.1007/978-3-662-45657-6_6.
Full textI. Kane, Emma, and Donald E. Spratt. "New Discoveries on the Roles of “Other” HECT E3 Ubiquitin Ligases in Disease Development." In Ubiquitin - Proteasome Pathway. IntechOpen, 2020. http://dx.doi.org/10.5772/intechopen.91770.
Full textTanaka, Tomoaki, and Tatsuya Nakatani. "Anticancer Target Molecules Against the SCF Ubiquitin E3 Ligase in RCC: Potential Approaches to the NEDD8 Pathway." In Emerging Research and Treatments in Renal Cell Carcinoma. InTech, 2012. http://dx.doi.org/10.5772/26409.
Full textConference papers on the topic "NEDD8 E3 ligases"
Song, Fei, Chuandong Fan, Xiaojing Zhang, Xinjiang Wang, and David W. Goodrich. "Abstract LB-280: RNP biogenesis factor Thoc1 is targeted for ubiquitination by NEDD4-1 E3 ligase." In Proceedings: AACR 103rd Annual Meeting 2012‐‐ Mar 31‐Apr 4, 2012; Chicago, IL. American Association for Cancer Research, 2012. http://dx.doi.org/10.1158/1538-7445.am2012-lb-280.
Full textKnudsen, LM, A. Sveen, CH Bergsland, MB Five, NL Rasmussen, MZ Totland, PW Eide, J. Bruun, RA Lothe, and E. Leithe. "PO-127 Role of the NEDD4 family of E3 ubiquitin ligases in colorectal cancer pathogenesis and their potential as biomarkers." In Abstracts of the 25th Biennial Congress of the European Association for Cancer Research, Amsterdam, The Netherlands, 30 June – 3 July 2018. BMJ Publishing Group Ltd, 2018. http://dx.doi.org/10.1136/esmoopen-2018-eacr25.168.
Full textKnudsen, Lars M., Anita Sveen, Christer A. Andreassen, Christian H. Bergsland, Ina A. Eilertsen, Nikoline L. Rasmussen, Max Z. Totland, et al. "Abstract 1433: Role of the E3 ubiquitin ligase NEDD4 in the regulation of PTEN and MDM2 in colorectal cancer." In Proceedings: AACR Annual Meeting 2020; April 27-28, 2020 and June 22-24, 2020; Philadelphia, PA. American Association for Cancer Research, 2020. http://dx.doi.org/10.1158/1538-7445.am2020-1433.
Full textLi, Hua, Albert Dobi, and Shiv Srivastava. "Abstract 3914: Androgen receptor (AR) degradation is controlled by the co-operation of PMEPA1 and the E3 ubiquitin ligase NEDD4-1." In Proceedings: AACR 103rd Annual Meeting 2012‐‐ Mar 31‐Apr 4, 2012; Chicago, IL. American Association for Cancer Research, 2012. http://dx.doi.org/10.1158/1538-7445.am2012-3914.
Full textLi, Hua, Elizabeth Umeda, Yingjie Song, Denise Young, Lakshmi Ravindranath, Ahmed Mohamed, Shashwat Sharad, et al. "Abstract 4679: Silencing of PMEPA1, a NEDD4 E3 ubiquitin ligase binding protein, stabilizes androgen receptor and confers resistance to AR inhibitors." In Proceedings: AACR 106th Annual Meeting 2015; April 18-22, 2015; Philadelphia, PA. American Association for Cancer Research, 2015. http://dx.doi.org/10.1158/1538-7445.am2015-4679.
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