Relevant bibliographies by topics / Newly synthesized proteins

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  1. Journal articles
  2. Dissertations / Theses
  3. Books
  4. Book chapters
  5. Conference papers

Academic literature on the topic 'Newly synthesized proteins'

Author: Grafiati
Published: 4 June 2021
Last updated: 14 February 2022

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Journal articles on the topic "Newly synthesized proteins"

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Bukau, Bernd, Elke Deuerling, Christine Pfund, and Elizabeth A. Craig. "Getting Newly Synthesized Proteins into Shape." Cell 101, no. 2 (2000): 119–22. http://dx.doi.org/10.1016/s0092-8674(00)80806-5.

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Ma, Yuanhui, Daniel B. McClatchy, Salim Barkallah, William W. Wood, and John R. Yates. "Quantitative analysis of newly synthesized proteins." Nature Protocols 13, no. 8 (2018): 1744–62. http://dx.doi.org/10.1038/s41596-018-0012-y.

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Xu, Guilian, Amrutha Pattamatta, Ryan Hildago, Michael C. Pace, Hilda Brown, and David R. Borchelt. "Vulnerability of newly synthesized proteins to proteostasis stress." Journal of Cell Science 129, no. 9 (2016): 1892–901. http://dx.doi.org/10.1242/jcs.176479.

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Kramer, Günter, Ayala Shiber, and Bernd Bukau. "Mechanisms of Cotranslational Maturation of Newly Synthesized Proteins." Annual Review of Biochemistry 88, no. 1 (2019): 337–64. http://dx.doi.org/10.1146/annurev-biochem-013118-111717.

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The timely production of functional proteins is of critical importance for the biological activity of cells. To reach the functional state, newly synthesized polypeptides have to become enzymatically processed, folded, and assembled into oligomeric complexes and, for noncytosolic proteins, translocated across membranes. Key activities of these processes occur cotranslationally, assisted by a network of machineries that transiently engage nascent polypeptides at distinct phases of translation. The sequence of events is tuned by intrinsic features of the nascent polypeptides and timely associati
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Wang, Feng, Larissa A. Canadeo, and Jon M. Huibregtse. "Ubiquitination of newly synthesized proteins at the ribosome." Biochimie 114 (July 2015): 127–33. http://dx.doi.org/10.1016/j.biochi.2015.02.006.

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Beatty, Kimberly E., Julie C. Liu, Fang Xie, et al. "Fluorescence Visualization of Newly Synthesized Proteins in Mammalian Cells." Angewandte Chemie International Edition 45, no. 44 (2006): 7364–67. http://dx.doi.org/10.1002/anie.200602114.

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Beatty, Kimberly E., Julie C. Liu, Fang Xie, et al. "Fluorescence Visualization of Newly Synthesized Proteins in Mammalian Cells." Angewandte Chemie 118, no. 44 (2006): 7524–27. http://dx.doi.org/10.1002/ange.200602114.

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tom Dieck, Susanne, Lisa Kochen, Cyril Hanus, et al. "Direct visualization of newly synthesized target proteins in situ." Nature Methods 12, no. 5 (2015): 411–14. http://dx.doi.org/10.1038/nmeth.3319.

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Ma, Yuanhui, Daniel B. McClatchy, Salvador Martínez-Bartolomé, Casimir Bamberger та John R. Yates. "Temporal Quantitative Profiling of Newly Synthesized Proteins during Aβ Accumulation". Journal of Proteome Research 20, № 1 (2020): 763–75. http://dx.doi.org/10.1021/acs.jproteome.0c00645.

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Beatty, Kimberly E., Fang Xie, Qian Wang, and David A. Tirrell. "Selective Dye-Labeling of Newly Synthesized Proteins in Bacterial Cells." Journal of the American Chemical Society 127, no. 41 (2005): 14150–51. http://dx.doi.org/10.1021/ja054643w.

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Dissertations / Theses on the topic "Newly synthesized proteins"

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Wiemhoefer, Anne. "Identification and characterization of interferon-gamma induced ubiquitinated newly synthesized proteins." Doctoral thesis, Humboldt-Universität zu Berlin, Mathematisch-Naturwissenschaftliche Fakultät I, 2011. http://dx.doi.org/10.18452/16358.

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Ein Schlüsselprozess in der Immunantwort ist die durch das proinflammatorische Zytokin Interferon-gamma (IFNg) induzierte transiente Akkumulation von neu synthetisierten defekten Proteinen, die durch Anknüpfen von Polymeren des Proteins Ubiquitin (Ub) post-translational modifiziert werden. Die Ubiquitinierung ist das Schlüsselsignal für den Abbau dieser Proteine. Die Abbauprodukte dienen unter anderem als Quelle für die Prozessierung von Antigenen. Um die frühe Immunantwort besser zu verstehen, wurden im Rahmen dieser Arbeit die Identität und Charakteristika dieser neu synthetisierten Proteine
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Beatty, Kimberly Elizabeth Grubbs Robert H. Tirrell David A. "Imaging the proteome : metabolic tagging of newly synthesized proteins with reactive methionine analogues /." Diss., Pasadena, Calif. : California Institute of Technology, 2008. http://resolver.caltech.edu/CaltechETD:etd-03052008-105142.

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Zedan, Mostafa [Verfasser], and Bernd [Akademischer Betreuer] Bukau. "Analysis of the role of N-terminal acetylation of newly synthesized proteins in Saccharomyces cerevisiae / Mostafa Zedan ; Betreuer: Bernd Bukau." Heidelberg : Universitätsbibliothek Heidelberg, 2019. http://d-nb.info/1181792215/34.

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Ullrich, Milena [Verfasser]. "Establishing bio-orthogonal labeling and click chemistry in Caenorhabditis elegans as a tool to identify newly synthesized proteins / Milena Ullrich." Berlin : Medizinische Fakultät Charité - Universitätsmedizin Berlin, 2016. http://d-nb.info/1082538132/34.

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Chaudhari, Sujata Suresh. "The molecular mechanisms of Knickkopf and Retroactive proteins in organization and protection of chitin in the newly synthesized insect exoskeleton." Diss., Kansas State University, 2011. http://hdl.handle.net/2097/15325.

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Doctor of Philosophy<br>Department of Biochemistry<br>Subbaratnam Muthukrishnan<br>In order to grow and develop, insects must undergo a process of molting, wherein the old cuticle is replaced with a new one. A thin envelope layer has been predicted to act as a physical barrier between molting fluid chitinases and the site of new chitin synthesis ensuring selective protection of newly synthesized chitin. The factors that help the new exoskeleton withstand the deleterious effects of chitinolytic enzymes remain poorly understood. In the current study a mechanistic role for two proteins, Knickkop
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Wiemhoefer, Anne [Verfasser], Peter-Michael [Akademischer Betreuer] Kloetzel, Wolfgang [Akademischer Betreuer] Lockau, and Wolfgang [Akademischer Betreuer] Dubiel. "Identification and characterization of interferon-gamma induced ubiquitinated newly synthesized proteins / Anne Wiemhoefer. Gutachter: Peter-Michael Kloetzel ; Wolfgang Lockau ; Wolfgang Dubiel." Berlin : Humboldt Universität zu Berlin, Mathematisch-Naturwissenschaftliche Fakultät I, 2011. http://d-nb.info/1015130135/34.

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Lavigueur, Olivier. "Identification of newly synthesized HIV-1 pr55gag on Lysosmal-associated membrane protein-1 late endosomal vesicles." Thesis, McGill University, 2010. http://digitool.Library.McGill.CA:80/R/?func=dbin-jump-full&object_id=86856.

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Recent work published from our lab showed that modulation of the dynein motor complex affected HIV-1 viral production but not viral infectivity and that trafficking of viral components played an important role in assembly. It was further demonstrated that viral genomic RNA and the HIV-1 structural protein pr55Gag co-localized on LAMP-1 - a transmembrane glycoprotein found on endosomal and lysosomal membranes - late endosomal vesicles. Using the Lumio™ dyes fluorescein arsenical helix binder (FlAsH) and resorufin arsenical helix binder (ReAsH) and TC-tagged Gag-TC and pNL4-3TC constructs, we sh
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Beatty, Kimberly Elizabeth. "Imaging the Proteome: Metabolic Tagging of Newly Synthesized Proteins with Reactive Methionine Analogues." Thesis, 2008. https://thesis.library.caltech.edu/884/1/Chapter1Beatty.pdf.

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Many strategies have been described for identifying proteins isolated from tissues, cells, or organelles, but the cellular proteome undergoes complex dynamic changes in response to disease or environment. A more complete analysis of the proteome requires complementary, time-resolved images of cellular proteins. In one method for obtaining dynamic proteomic data, cellular proteins are selectively tagged with small, reactive amino acid analogues. Co-translational incorporation of reactive methionine (Met) analogues [e.g., azidohomoalanine (Aha) or homopropargylglycine (Hpg)] is reminiscent of
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Books on the topic "Newly synthesized proteins"

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Bender, David A. 3. Protein nutrition. Oxford University Press, 2014. http://dx.doi.org/10.1093/actrade/9780199681921.003.0003.

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About 14 per cent of the human body is protein, so a growing child, or pregnant woman must have protein intake to increase the total amount of protein in the body, or foetus, as it grows. But why does an adult, whose body weight does not change, require protein in the diet? ‘Protein nutrition’ explains that proteins contain the element nitrogen in their constituent amino acids. Nitrogen balance is the difference between the intake of nitrogen-containing compounds in the diet and the excretion of nitrogen-containing compounds from the body. There is a requirement for dietary protein as the cont
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Book chapters on the topic "Newly synthesized proteins"

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Horn, Darryl, Flavia Fontanesi, and Antoni Barrientos. "Exploring Protein-Protein Interactions Involving Newly Synthesized Mitochondrial DNA-Encoded Proteins." In Membrane Trafficking. Humana Press, 2008. http://dx.doi.org/10.1007/978-1-59745-261-8_9.

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Dungrawala, Huzefa, and David Cortez. "Purification of Proteins on Newly Synthesized DNA Using iPOND." In The Nucleus. Springer New York, 2014. http://dx.doi.org/10.1007/978-1-4939-1680-1_10.

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Kramer, Gertjan, Piotr T. Kasper, Luitzen de Jong, and Chris G. de Koster. "Quantitation of Newly Synthesized Proteins by Pulse Labeling with Azidohomoalanine." In Methods in Molecular Biology. Humana Press, 2011. http://dx.doi.org/10.1007/978-1-61779-148-2_12.

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Lain, B., C. A. Tanase, A. Iriarte, A. E. Johnson, and M. Martinez-Carrion. "Association of Newly Synthesized Mitochondrial Aspartate Aminotransferase with Cytosolic Factors." In Biochemistry and Molecular Biology of Vitamin B6 and PQQ-dependent Proteins. Birkhäuser Basel, 2000. http://dx.doi.org/10.1007/978-3-0348-8397-9_40.

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Boehringer, Daniel, and Nenad Ban. "Co-translational Protein Processing, Folding, Targeting, and Membrane Insertion of Newly Synthesized Proteins." In Macromolecular Crystallography. Springer Netherlands, 2011. http://dx.doi.org/10.1007/978-94-007-2530-0_2.

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Bruno, Mary K., Steven D. Cohen, and Edward A. Khairallah. "Selective Alterations in the Profiles of Newly Synthesized Proteins by Acetaminophen (APAP) and its Dimethylated Analogues: Relationship to Oxidative Stress." In Advances in Experimental Medicine and Biology. Springer New York, 1991. http://dx.doi.org/10.1007/978-1-4684-5877-0_27.

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Landgraf, Peter, Elmer R. Antileo, Erin M. Schuman, and Daniela C. Dieterich. "BONCAT: Metabolic Labeling, Click Chemistry, and Affinity Purification of Newly Synthesized Proteomes." In Site-Specific Protein Labeling. Springer New York, 2014. http://dx.doi.org/10.1007/978-1-4939-2272-7_14.

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Schmitz, Gerd, Gerhard Rogler, Wolfgang Drobnik, Barbara Trümbach, Christoph Moellers, and Karl J. Lackner. "The Defect in HDL3 Mediated Efflux of Newly Synthesized Cholesterol is Associated with Impaired Activation of Protein Kinase C in Tangier Fibroblasts." In Cardiovascular Disease 2. Springer US, 1995. http://dx.doi.org/10.1007/978-1-4615-1959-1_11.

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Stelter, Philipp, and Ed Hurt. "A Pulse–Chase Epitope Labeling to Study Cellular Dynamics of Newly Synthesized Proteins." In Methods in Cell Biology. Elsevier, 2014. http://dx.doi.org/10.1016/b978-0-12-417160-2.00007-2.

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Lucchesi, John C. "Inheritance of chromatin modifications through the cell cycle." In Epigenetics, Nuclear Organization & Gene Function. Oxford University Press, 2019. http://dx.doi.org/10.1093/oso/9780198831204.003.0016.

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Following mitosis, the particular transcriptional landscape of the parent cell must be faithfully transmitted to daughter cells. Although transcription ceases, not all transcription factors are displaced. DNA methylation has been implicated in the inheritance of chromatin characteristics because maintenance DNA methyl transferases methylate CpG dinucleotides on the newly replicated strand if the corresponding GpC on the parent strand is methylated. Nucleosomes that are deposited on the newly synthesized DNA strands are made up of old and new histones, and some marks present on the old histones are maintained. The proper distribution of nucleosomes and the topological organization of the genome into topologically associating domains (TADs) must be transmitted to daughter cells. Following DNA replication, centromeres must be specified on the daughter chromatids. In most eukaryotes, centromeres are identified by the presence of nucleosomes bearing the histone H3 variant CENP-A. An additional number of proteins and non-coding RNAs originating from centric and pericentromeric DNA repeats associate with centromeres and appear to play a role in centromere function.
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Conference papers on the topic "Newly synthesized proteins"

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Polack, B., A. Duperray, and R. Berthier. "PLATELET AND ENDOTHELIAL CELL CYTOADHESINS ARE BIOSYNTHESIZED AND PROCESSED VIA SIMILAR PATHWAYS." In XIth International Congress on Thrombosis and Haemostasis. Schattauer GmbH, 1987. http://dx.doi.org/10.1055/s-0038-1642815.

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The cytoadhesin family represents a group of heterodimeric adhesion receptors with common structural, fonctional and immunochemical properties. Platelet and endothelial cell (EC) GPIIbIII a related proteins exemplify two members of this family. In the present study the biosynthesis and processing of EC GPIIbIII a were examined and compared with that of platelet GPIIbIIIa to verify whether the diversity of these cytoadhesins was related to post translational events.Endothelial cells of human umbilical cord vein origin were metabolicaly labeled with 35S-methionine. The newly synthesized proteins
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Charon, M. H., L. Tranqui, A. Andrieux, G. Hudry-Clergeon, and G. Marguerie. "FIBRINOGEN BINDING TO ENDOTHELIAL CELLS AND INTERFERING PEPTIDES." In XIth International Congress on Thrombosis and Haemostasis. Schattauer GmbH, 1987. http://dx.doi.org/10.1055/s-0038-1644735.

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Fibrinogen interacts with platelets and endothelial cells via specific binding sites. While the platelet fibrinogen receptor has been identified and was found to be associated with GPIIb-IIIa, the binding site on endothelial cells has not been characterized yet. The platelet GPIIb-IIIa belongs to the newly identified cytoadhesin family which includes immunologicaly related receptors interacting with RGD containing proteins. A cytoadhesin has recently been described on endothelial cells and the possibility that fibrinogen might interact with this glycoprotein was examined. Peptides correspondin
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Henderson, Jonathan T., Garrett Shannon, Alexander I. Veress, and Corey P. Neu. "Newly Synthesized RNA and Intranuclear Strain Measurements in Living Cells Maintained Within Native Tissue." In ASME 2013 Summer Bioengineering Conference. American Society of Mechanical Engineers, 2013. http://dx.doi.org/10.1115/sbc2013-14202.

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The nucleus is a regulation center for cellular gene expression 1. Mechanical forces transfer to the nucleus directly and indirectly through cellular cytoskeletal structures and pathways 2, 3. The transmitted strains often cause nuclear deformation which is thought to trigger mechanosensitive gene expression within the nucleus 4. Protein dynamics inside the nucleus are additionally important for maintaining the nuclear structure and in facilitating gene expression at the transcription level 5. Probing spatiotemporal relationships between mechanical forces and localized gene expression (i.e. bi
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Mahdi, Amira F., Beatrice Malacrida, Kieran McGourty, Aoife J. Lowery, and Patrick A. Kiely. "Abstract 2100: Usingin vitromodels to identify newly synthesised proteins involved in the progression of breast cancer." In Proceedings: AACR Annual Meeting 2018; April 14-18, 2018; Chicago, IL. American Association for Cancer Research, 2018. http://dx.doi.org/10.1158/1538-7445.am2018-2100.

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Marquerie, G., A. Duperray, G. Uzan, and R. Berthier. "BIOSYNTHETIC PATHWAYS OF THE PLATELET FIBRINOGEN RECEPTOR IN HUMAN MEGAKARYOCYTES." In XIth International Congress on Thrombosis and Haemostasis. Schattauer GmbH, 1987. http://dx.doi.org/10.1055/s-0038-1642954.

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Interaction between cells and between cells and extracellular matrices are critical for a number of biological processes, including organ development, cell differenciation, cell motility, and the inimune' response. These interactions are mediated by a family of adhesion receptors that recognize short sequences such as Arg-Gly-Asp (RGD). These receptors share similar structural properties. They are heterodimers composed of a and B subunits and sometime express common epitopes. This suggests that the structural and functional relationship of these receptors may result from the transcription of r
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