Academic literature on the topic 'NGS'

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Journal articles on the topic "NGS"

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Tatebale, Rivaldo, Orbanus Naharia, and Helen J. Lawalata. "Isolation and Identification of Lactic Acid Bacteria from Red Dragon Fruit (Hylocereus polyrhicus) as Exopolysaccharide Producers." Indonesian Biodiversity Journal 5, no. 1 (2024): 8–19. https://doi.org/10.53682/ibj.v5i1.7730.

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Cherry tomatoes are a type of Red Dragon Fruit that has various benefits, including lowering cholesterol levels, preventing colon cancer, and strengthening the working power of muscles. Isolation of LAB isolated from Dragon Fruit as a production material for EPS. This study aims to isolate and identify LAB as a producer of EPS from red dragon fruit (Hylocereus polyrhiruz), which can produce exopolysaccharides. This research uses a descriptive research method. Data from experimental research in the laboratory obtained 10 LAB isolates, namely isolates NG1, NG2, NG3, NG4, NG5, NG6, NG7, NG8, NG9
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Veldman, Abigail, Mensiena B. G. Kiewiet, Margaretha Rebecca Heiner-Fokkema, et al. "Towards Next-Generation Sequencing (NGS)-Based Newborn Screening: A Technical Study to Prepare for the Challenges Ahead." International Journal of Neonatal Screening 8, no. 1 (2022): 17. http://dx.doi.org/10.3390/ijns8010017.

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Newborn screening (NBS) aims to identify neonates with severe conditions for whom immediate treatment is required. Currently, a biochemistry-first approach is used to identify these disorders, which are predominantly inherited meta1bolic disorders (IMD). Next-generation sequencing (NGS) is expected to have some advantages over the current approach, for example the ability to detect IMDs that meet all screening criteria but lack an identifiable biochemical footprint. We have now designed a technical study to explore the use of NGS techniques as a first-tier approach in NBS. Here, we describe th
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Tunis, Sean. "Reimbursing NGS Testing." Clinical OMICs 2, no. 1 (2015): 21–23. http://dx.doi.org/10.1089/clinomi.02.01.08.

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Zemlo, Tamara. "Democratizing NGS Platforms." Genetic Engineering & Biotechnology News 32, no. 5 (2012): 16–18. http://dx.doi.org/10.1089/gen.32.5.05.

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Tunis, Sean. "Reimbursing NGS Testing." Genetic Engineering & Biotechnology News 35, no. 3 (2015): 5–6. http://dx.doi.org/10.1089/gen.35.03.03.

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Kim, Annette S., Angela N. Bartley, Julia A. Bridge, et al. "31. The PT alphabet soup: LDT, FDA, NGS, non-NGS, @#$!%." Cancer Genetics 233-234 (April 2019): S13. http://dx.doi.org/10.1016/j.cancergen.2019.04.037.

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Szabo, Kathrin, Burkhard Malorny, and Manfred Stoyke. "Etablierung der § 64 LFGB Arbeitsgruppen „NGS – Bakteriencharakterisierung“ und „NGS – Speziesidentifizierung“." Journal of Consumer Protection and Food Safety 15, no. 1 (2019): 85–89. http://dx.doi.org/10.1007/s00003-019-01255-z.

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Zusammenfassung Das Next-Generation Sequencing (NGS) besitzt großes Potential im Bereich der Lebensmittelsicherheit und der Authentizitätsprüfung von Lebensmitteln. Die Gesamtgenomsequenzierung mikrobieller Genome kombiniert mit bioinformatischen Auswerteprogrammen ersetzt zunehmend die klassischen Typisierungsmethoden und gilt aufgrund ihres außerordentlichen Auflösungsvermögen mittlerweile als Methode der Wahl im Rahmen von Ausbruchsuntersuchungen. Zur Authentizitätskontrolle z. B. von Fleisch- und Fischproben finden NGS-Methoden als Metabarcoding immer häufiger Anwendung, um Täuschung und I
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Ardeshirdavani, Amin, Erika Souche, Luc Dehaspe, Jeroen Van Houdt, Joris Vermeesch, and Yves Moreau. "NGS-Logistics : Federated analysis of NGS sequence variants across multiple locations." Genome Medicine 6, no. 9 (2014): 71. http://dx.doi.org/10.1186/preaccept-3696327041308731.

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May, Ali, Sanne Abeln, Mark J. Buijs, Jaap Heringa, Wim Crielaard, and Bernd W. Brandt. "NGS-eval: NGS Error analysis and novel sequence VAriant detection tooL." Nucleic Acids Research 43, W1 (2015): W301—W305. http://dx.doi.org/10.1093/nar/gkv346.

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Ravasio, Viola, Marco Ritelli, Andrea Legati, and Edoardo Giacopuzzi. "GARFIELD-NGS: Genomic vARiants FIltering by dEep Learning moDels in NGS." Bioinformatics 34, no. 17 (2018): 3038–40. http://dx.doi.org/10.1093/bioinformatics/bty303.

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Dissertations / Theses on the topic "NGS"

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Toledo, Rodrigo Atique Ferraz de. "Identificação e análise funcional de mutação associadas às craniossinostoses." Universidade de São Paulo, 2016. http://www.teses.usp.br/teses/disponiveis/41/41131/tde-20122016-090151/.

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As craniossinostoses são malformações craniofaciais caracterizadas pelo fechamento precoce de uma ou mais suturas cranianas. Elas são doenças congênitas e são causadas por mutações em diversos genes devido ao grande número de vias envolvidas na formação e manutenção das suturas cranianas. Embora mutações em 53 genes já tenham sido descritas o conhecimento da genética e da patofisiologia das craniossinostoses ainda é incompleto. Nesse trabalho tivemos como objetivo a identificação de novas mutações associadas às craniossinostoses bem como o aprofundamento do conhecimento sobre a atuação dessas
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Riou, Raphaelle. "Contribution à l'étude du rôle des cellules Natural Killer dans le contrôle de l'infection à cytomégalovirus." Thesis, Nantes, 2016. http://www.theses.fr/2016NANT1002/document.

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Les cellules NK, membres de l’immunité innée, sont impliquées dans le contrôle des infections virales et notamment l’infection à cytomégalovirus (CMV). Généralement bien tolérée chez l’individu immunocompétent, l’infection à CMV demeure associée à une forte morbidité chez les individus dont le système immunitaire est compromis (patients transplantés, coinfectés par le VIH) ou immature (fœtus et nouveaux nés). Lors de l’infection par le CMV, une relation étroite s’établit entre le système immunitaire et le virus. Celle-ci génère en effet une forte mobilisation, associée à un profond remodelage,
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Prieto, Barja Pablo 1986. "NGS applications in genome evolution and adaptation : A reproducible approach to NGS data analysis and integration." Doctoral thesis, Universitat Pompeu Fabra, 2017. http://hdl.handle.net/10803/565601.

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In this PhD I have used NGS technologies in different organisms and scenarios such as in ENCODE, comparing the conservation and evolution of long non-coding RNA sequences between human and mouse, using experimental evidences from genome, transcriptome and chromatin. A similar approach was followed in other organisms such as the mesoamerican common bean and in chicken. Other analysis carried with NGS data involved the well known parasite, Leishmania Donovani, the causative agent of Leishmaniasis. I used NGS data obtained from genome and transcriptome to study the fate of its genome in survival
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Matocha, Petr. "Efektivní hledání překryvů u NGS dat." Master's thesis, Vysoké učení technické v Brně. Fakulta informačních technologií, 2017. http://www.nusl.cz/ntk/nusl-363811.

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The main theme of this work is the detection of overlaps in NGS data. The work contains an overview of NGS sequencing technologies that are the source of NGS data. In the thesis, the problem of overlapping detection is generally defined. Next, an overview of the available algorithms and approaches for detecting overlaps in NGS data is created. Principles of these algorithms are described herein. In the second part of this work a suitable tool for detecting approximate overlaps in NGS data is designed and its implementation is described herein. In conclusion, the experiments performed with this
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Alic, Andrei Stefan. "Improved Error Correction of NGS Data." Doctoral thesis, Universitat Politècnica de València, 2016. http://hdl.handle.net/10251/67630.

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[EN] The work done for this doctorate thesis focuses on error correction of Next Generation Sequencing (NGS) data in the context of High Performance Computing (HPC). Due to the reduction in sequencing cost, the increasing output of the sequencers and the advancements in the biological and medical sciences, the amount of NGS data has increased tremendously. Humans alone are not able to keep pace with this explosion of information, therefore computers must assist them to ease the handle of the deluge of information generated by the sequencing machines. Since NGS is no longer just a research t
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Mohamed, Bashir. "NGS-baserad metod för fetal blodgruppstypning." Thesis, Linnéuniversitetet, Institutionen för kemi och biomedicin (KOB), 2021. http://urn.kb.se/resolve?urn=urn:nbn:se:lnu:diva-106208.

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Hemolytic disease of fetus or newborn (HDFN) är en komplikation där foster eller nyföddas erytrocyter förstörs för tidigt. HDFN uppstår när det föreligger blodgruppsinkompatibilitet mellan moder och barnet. Komplikationerna/ symptomen kan variera allt från mildare symptom till fosterdöd. HDFN orsakas framförallt av antikropp D (RhD-immunisering) och på grund av detta utförs det typning av fetalt RhD i maternell plasma. Utöver RhD-immuniseringar kan svåra fall av HDFN ibland orsakas av andra blodgruppssystem som c (Rh) och K (Kell). Fetal RhD-typning görs idag som screening på alla RhD-negativa
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Gorgé, Olivier. "Diagénèse de l’ADN bactérien et analyses métagénomiques de pathologies bactériennes du passé." Thesis, Université Paris-Saclay (ComUE), 2016. http://www.theses.fr/2016SACLS572/document.

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Cette étude a pour objet la mise en évidence de traces d'ADN bactérien pathogène dans des échantillons animaux et humains anciens, et ainsi améliorer les connaissances sur l'évolution des maladies au cours du temps. En parallèle, nous avons étudié les phénomènes de dégradation de l'ADN dans le sol sur des cadavres de souris enterrées après avoir été contaminées par des bactéries non pathogènes. Cette étude des processus taphonomiques s'est étalée sur trois ans et a permis de montrer une disparition rapide des bactéries simulantes, remplacé par l'ADN des bactéries du sol, qui colonisent rapidem
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Hammami, Ali. "La sécurité des futures architectures convergentes pour des services personnalisés : aspect architectural et protocolaire." Thesis, Paris, ENST, 2013. http://www.theses.fr/2013ENST0039/document.

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L’émergence et l’évolution des réseaux de nouvelles génération (NGN) a soulevé plusieurs défis surtout en termes d’hétérogénéité, de mobilité et de sécurité. En effet, l’utilisateur est capable, dans un tel environnement, d’avoir accès à plusieurs réseaux, à travers différents terminaux, avec un choix vaste de services fournis par différents fournisseurs. De plus, les utilisateurs finaux demandent à être constamment connectés n’importe où, n’importe quand et n’importe comment. Ils désirent également avoir un accès sécurisé à leurs services à travers une session dynamique, seamless et continue
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Nowoshilow, Sergej. "Transcriptome analysis of axolotl spinal cord and limb regeneration." Doctoral thesis, Saechsische Landesbibliothek- Staats- und Universitaetsbibliothek Dresden, 2016. http://nbn-resolving.de/urn:nbn:de:bsz:14-qucosa-205953.

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Regeneration is a relatively widespread phenomenon in nature, although different organisms exhibit different abilities to reconstitute missing structures. Due to the diversity in the extent of damage the organisms can repair it has been debated for a long time whether those abilities are evolutionary traits that arose independently in multiple organisms or whether they represent a by-product of more basic processes. To date, due to constant increase in the amount of available genomic information this question can be approached by means of comparative genomics by comparing several taxa that ha
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SAGGESE, IGOR. "NGS data analysis approaches for clinical applications." Doctoral thesis, Università del Piemonte Orientale, 2017. http://hdl.handle.net/11579/86924.

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Books on the topic "NGS"

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Sablok, Gaurav, Sunil Kumar, Saneyoshi Ueno, Jimmy Kuo, and Claudio Varotto, eds. Advances in the Understanding of Biological Sciences Using Next Generation Sequencing (NGS) Approaches. Springer International Publishing, 2015. http://dx.doi.org/10.1007/978-3-319-17157-9.

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R, Floyd M., and International Conference on CANDU Fuel (3rd : 1992 : Pembroke, Ont.), eds. Behaviour of Bruce NGS-A fuel irradiated to a burnup of ̃ 500 MWh/kgU. Fuel Materials Branch, Chalk River Laboratories, 1992.

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Kippenberger, Martin. Martin Kippenberger: The happy end of Franz Kafka's 'Amerika' : afb. = [Abb.] = [fig.] : Sollicitatiegesprekken = [Einstell u ngs gesprärche] = job interviews. Museum Boymans-van Beuningen, 1994.

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Stern, Hal. NFS und NIS: Managing von UNIX-Netzwerken. Addison-Wesley, 1993.

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R, Floyd M., Chalk River Laboratories. Fuel Materials Branch., Atomic Energy of Canada Limited., and International Conference on CANDU Fuel (3rd : 1992 : Pembroke, Ont.), eds. An overview of the examination of fuel as follow-up to the 1988 November overpower transient in Pickering NGS-A unit 1. Chalk River Laboratories, 1992.

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National Genealogical Society. Conference in the States. Pennsylvania, cradle of a nation: NGS, GSP, 7-10 May, 1997, Valley Forge : National Genealogical Society, 1997 Conference in the States : program syllabus. The Society, 1997.

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Sentā, Kokusai Kyōryoku NGO. NGO dēta bukku, 2011: Sūji de miru Nihon no NGO = Data book on Japanese NGOs, 2011. Gaimushō Kokusai Kyōryokukyoku Minkan Enjo Renkeishitsu Gaimushō Shusai Heisei 22-nendo NGO ni Yoru Tēma Betsu Nōryoku Kōjō Puroguramu "NGO no Soshiki, Katsudō ni Kakawaru Dēta Bukku Sakusei", 2011.

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Sentā, Kokusai Kyōryoku NGO. NGO dēta bukku, 2011: Sūji de miru Nihon no NGO = Data book on Japanese NGOs, 2011. Gaimushō Kokusai Kyōryokukyoku Minkan Enjo Renkeishitsu Gaimushō Shusai Heisei 22-nendo NGO ni Yoru Tēma Betsu Nōryoku Kōjō Puroguramu "NGO no Soshiki, Katsudō ni Kakawaru Dēta Bukku Sakusei", 2011.

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Yŏng-jin, Sŏ, ed. UN, NGO, kŭllobŏl simin sahoe: United Nations, NGOs, and global civil society. Hanyang Taehakkyo Chʻulpʻanbu, 2000.

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Shah, Gulzar H. The role of NGOs in community health in Pakistan: A NGO pulse report. Lahore University of Management Sciences, 2005.

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Book chapters on the topic "NGS"

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Kappelmann-Fenzl, Melanie. "NGS Data." In Next Generation Sequencing and Data Analysis. Springer International Publishing, 2021. http://dx.doi.org/10.1007/978-3-030-62490-3_7.

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Eisele, Marius, and Melanie Kappelmann-Fenzl. "NGS Technologies." In Next Generation Sequencing and Data Analysis. Springer International Publishing, 2021. http://dx.doi.org/10.1007/978-3-030-62490-3_4.

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Arnemann, J. "Next-Generation-Sequencing (NGS)." In Springer Reference Medizin. Springer Berlin Heidelberg, 2019. http://dx.doi.org/10.1007/978-3-662-48986-4_3542.

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Teng, Shaolei. "NGS for Sequence Variants." In Advances in Experimental Medicine and Biology. Springer Singapore, 2016. http://dx.doi.org/10.1007/978-981-10-1503-8_1.

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Arnemann, J. "Next-Generation-Sequencing (NGS)." In Lexikon der Medizinischen Laboratoriumsdiagnostik. Springer Berlin Heidelberg, 2018. http://dx.doi.org/10.1007/978-3-662-49054-9_3542-1.

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Wang, Min. "Next-Generation Sequencing (NGS)." In Clinical Molecular Diagnostics. Springer Singapore, 2021. http://dx.doi.org/10.1007/978-981-16-1037-0_23.

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Kappelmann-Fenzl, Melanie. "Library Construction for NGS." In Next Generation Sequencing and Data Analysis. Springer International Publishing, 2021. http://dx.doi.org/10.1007/978-3-030-62490-3_3.

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Benoit, Gaetan, Claire Lemaitre, Guillaume Rizk, Erwan Drezen, and Dominique Lavenier. "De Novo NGS Data Compression." In Algorithms for Next-Generation Sequencing Data. Springer International Publishing, 2017. http://dx.doi.org/10.1007/978-3-319-59826-0_4.

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Wang, Xinkun. "Next-Generation Sequencing (NGS) Technologies." In Next-Generation Sequencing Data Analysis, 2nd ed. CRC Press, 2023. http://dx.doi.org/10.1201/9780429329180-6.

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Mukhopadhyay, Chandra Sekhar, and Bhawanpreet Kaur. "NGS-Based Biomarkers in Livestock." In Livestock Diseases and Management. Springer Nature Singapore, 2023. http://dx.doi.org/10.1007/978-981-99-2209-3_7.

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Conference papers on the topic "NGS"

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Yao, Jian, Rick Bennett, and Andria Bilich. "GPS Clock Products for NGS." In 56th Annual Precise Time and Time Interval Systems and Applications Meeting. Institute of Navigation, 2025. https://doi.org/10.33012/2025.19951.

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LaSalle, Anita. "Workshop 10 introduction: The Next Generation Software (NGS) workshop - NGS 2008." In Distributed Processing Symposium (IPDPS). IEEE, 2008. http://dx.doi.org/10.1109/ipdps.2008.4536095.

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Lamas, Gustavo Manginelli, Yves Glauber Silva dos Santos, and Marcondes Cavalcante França Jr. "Diagnostic yield of a NGS panel in Brazilian patients with sporadic peripheral neuropathy." In XIV Congresso Paulista de Neurologia. Zeppelini Editorial e Comunicação, 2023. http://dx.doi.org/10.5327/1516-3180.141s1.327.

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Introduction: The etiology of sporadic peripheral neuropathy (PN) remains unclear in a significant proportion of patients. In European and North American surveys, genetic causes have been increasingly recognized in these patients. Little is known about Latin American populations. Objective: We assessed the diagnostic yield of a comprehensive next generation sequencing (NGS) panel in a cohort of Brazilian patients with PN without family history. Potential predictors of genetic etiology in this group were further explored. Methods: We evaluated 41 consecutive adult patients regularly followed wi
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La Penna, Paolo. "ELT Pre-Focal Station NGS Sensor Arm." In Adaptive Optics for Extremely Large Telescopes 5. Instituto de Astrofísica de Canarias (IAC), 2017. http://dx.doi.org/10.26698/ao4elt5.0018.

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Kchouk, Mehdi, Jean-Francois Gibrat, and Mourad Elloumi. "An Error Correction Algorithm for NGS Data." In 2017 28th International Workshop on Database and Expert Systems Applications (DEXA). IEEE, 2017. http://dx.doi.org/10.1109/dexa.2017.33.

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Atashpaz-Gargari, Esmaeil, Mohammad Shahrokh Esfahani, Richard Metz, and Charles D. Johnson. "OBGene: Optimal barcode generator for NGS experiments." In 2012 IEEE International Workshop on Genomic Signal Processing and Statistics (GENSIPS). IEEE, 2012. http://dx.doi.org/10.1109/gensips.2012.6507734.

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Riccardi, A., J. Antichi, F. Quirós-Pacheco, et al. "The NGS Pyramid wavefront sensor for ERIS." In SPIE Astronomical Telescopes + Instrumentation, edited by Enrico Marchetti, Laird M. Close, and Jean-Pierre Véran. SPIE, 2014. http://dx.doi.org/10.1117/12.2057920.

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Honisch, E., R. Fröhlich, AS Vesper, I. Beyer, T. Fehm, and D. Niederacher. "NGS-basierte Multigenpanel-Analyse BRCA1-assoziierter TNBCs." In 39. Jahrestagung der Deutschen Gesellschaft für Senologie. Georg Thieme Verlag KG, 2019. http://dx.doi.org/10.1055/s-0039-1687985.

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Budati, Krishnaveni, Jinoh Kim, Abhishek Chandra, and Jon Weissman. "NGS: Service Adaptation in Open Grid Platforms." In 2007 IEEE International Parallel and Distributed Processing Symposium. IEEE, 2007. http://dx.doi.org/10.1109/ipdps.2007.370504.

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Esposito, S., P.-M. Gori, and G. Brusa. "Single NGS for Extremely Large Telescope MCAO." In 1st AO4ELT conference - Adaptive Optics for Extremely Large Telescopes. EDP Sciences, 2010. http://dx.doi.org/10.1051/ao4elt/201004003.

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Reports on the topic "NGS"

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Cieśla, Marek. NGS Bladder cancer. University of Rzeszow, 2024. http://dx.doi.org/10.15584/ngs.rd.2024.

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The study group comprises 46 patients with urothelial bladder cancers referred for transurethral resection of the tumour. A molecular study on tumour-derived DNA was performed using next-generation sequencing. Somatic mutations were screened in 50 genes involved in cancerogenesis
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Vuyisich, Momchilo. Next generation sequencing (NGS)technologies and applications. Office of Scientific and Technical Information (OSTI), 2012. http://dx.doi.org/10.2172/1050518.

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Fondeur, Fernando, Kathryn Taylor-Pashow, Daniel Jones, and Thomas Peters. Analysis and Testing of Parsons NGS Solvent Formulation. Office of Scientific and Technical Information (OSTI), 2021. http://dx.doi.org/10.2172/1784922.

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Peters, T. SAMPLE RESULTS FROM ROUTINE SAMPLES AFTER THE NGS CHANGEOVER. Office of Scientific and Technical Information (OSTI), 2014. http://dx.doi.org/10.2172/1165535.

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Peters, T., and M. Williams. RESULTS OF ANALYSIS OF NGS CONCENTRATE DRUM SAMPLES [Next Generation Solvent]. Office of Scientific and Technical Information (OSTI), 2013. http://dx.doi.org/10.2172/1093873.

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Moyer, Bruce A., Joseph F. Birdwell, Jr, Peter V. Bonnesen, et al. Next Generation Solvent (NGS): Development for Caustic-Side Solvent Extraction of Cesium. Office of Scientific and Technical Information (OSTI), 2014. http://dx.doi.org/10.2172/1237596.

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Agarwal, Rahul. NGS based molecular characterization of a region affecting 5alphaandrost-16-en-3-one. Cold Spring Harbor Laboratory, 2016. http://dx.doi.org/10.1101/079855.

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งามประเสริฐวงศ์, ธงชัย, อาจอง ประทัตสุนทรสาร та พชรพล จุ่มศรี. สถานภาพและการใช้ทรัพยากรของค้างคาวคุณกิตติ Craseonycteris thonglongyai : รายงานผลการดำเนินงาน. ภาควิชาชีววิทยา คณะวิทยาศาสตร์ จุฬาลงกรณ์มหาวิทยาลัย, 2019. https://doi.org/10.58837/chula.res.2019.28.

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ค้างคาวกินแมลงมีบทบาทสำคัญต่อระบบนิเวศในการควบคุมประชากรแมลงในธรรมชาติ ในงานวิจัยนี้ได้ทำการศึกษาองค์ประกอบอาหารของค้างคาวคุณกิตติจากมูลค้างคาวที่เก็บจากถ้ำพระ ในพื้นที่โครงการอนุรักษ์พันธุกรรมพืชอันเนื่องมาจากพระราชดำริฯ อำเภอไทรโยค จังหวัดกาญจนบุรี โดยใช้ดีเอ็นเอบาร์โค้ดในการระบุชนิดของแมลง และใช้ไพร์เมอร์ที่มีความจำเพาะต่อแมลง (ZBJ-ArtF1c และ ZBJ-ArtR2c) ในปฏิกิริยาลูกโซ่โพลีเมอเรส (PCR) เพื่อเพิ่มจำนวนดีเอ็นเอของยีน cytochrome c oxidase subunit I (COI) ผลจากการวิเคราะห์ลำดับดีเอ็นเอด้วยเทคนิค next-generation sequencing (NGS) พบว่า อาหารของค้างคาวคุณกิตติส่วนใหญ่เป็นแมลงในอันดับผีเสื้อ (Lep
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Sloop Jr, Frederick {Fred} V. A GC-FID-Based Method for Quantifying the Breakdown of TiDG in NGS Solvent. Office of Scientific and Technical Information (OSTI), 2018. http://dx.doi.org/10.2172/1491325.

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Washington, A. L. II, and T. B. Peters. Sample Results From The Extraction, Scrub, And Strip Test For The Blended NGS Solvent. Office of Scientific and Technical Information (OSTI), 2014. http://dx.doi.org/10.2172/1123835.

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