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Journal articles on the topic 'OpenM'

Author: Grafiati

Published: 24 April 2022

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1

Gregersen, J. B., P. J. A. Gijsbers, and S. J. P. Westen. "OpenMI: Open modelling interface." Journal of Hydroinformatics 9, no. 3 (July 1, 2007): 175–91. http://dx.doi.org/10.2166/hydro.2007.023.

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Management issues in many sectors of society demand integrated analysis that can be supported by integrated modelling. Since all-inclusive modelling software is difficult to achieve, and possibly even undesirable, integrated modelling requires the linkage of individual models or model components that address specific domains. Emerging from the water sector, the OpenMI has been developed with the purpose of being the glue that can link together model components from various origins. The OpenMI provides a standardized interface to define, describe and transfer data on a time basis between software components that run simultaneously, thus supporting systems where feedback between the modelled processes is necessary in order to achieve physically sound results. The OpenMI allows the linking of models with different spatial and temporal representations: for example, linking river models and groundwater models, where the river model typically uses a one-dimensional grid and a short timestep and the groundwater model uses a two- or three-dimensional grid and a longer timestep. The OpenMI is designed to accommodate the easy migration of existing modelling systems, since their re-implementation may not be economically feasible due to the large investments that have been put into the development and testing of these systems.

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2

Haghighi, Sepand, Kasra Askari, Sarmin Hamidi, and Mohammad Mahdi Rahimi. "OPEM : Open Source PEM Cell Simulation Tool." Journal of Open Source Software 3, no. 27 (July 22, 2018): 676. http://dx.doi.org/10.21105/joss.00676.

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3

WU, Jun-Jie, Xue-Jun YANG, Guang-Hui LIU, and Yu-Hua TANG. "Parallel Data Reuse Theories for OpenMP and OpenTM Applications." Journal of Software 21, no. 12 (June 15, 2011): 3011–28. http://dx.doi.org/10.3724/sp.j.1001.2010.03696.

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4

Blind, M., and J. B. Gregersen. "Towards an Open Modelling Interface (OpenMI) the HarmonIT project." Advances in Geosciences 4 (August 9, 2005): 69–74. http://dx.doi.org/10.5194/adgeo-4-69-2005.

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Abstract. The Water Framework Directive (WFD) poses an immense challenge to water management in Europe. Aiming at a "good ecological status" of surface waters in 2015, integrated river basin management plans need to be in place by 2009, and broadly supported by stakeholders. Information & Communication Technology (ICT) tools, such as computational models, are very helpful in designing river basin management plans (rbmp-s). However, many scientists believe that a single integrated modelling system to support the WFD cannot be developed, and integrated systems need to be quite tailored to the local situation and evolve during a collaborative planning process. As a consequence there is an urgent need to increase the flexibility of modelling systems, such that dedicated model systems can be developed from available building blocks. In the recent past a number of initiatives have been started to develop an IT framework for modelling to meet the required flexibility. In Europe the international project HarmonIT, which is sponsored by the European Commission, is developing and implementing a standard interface for modelling components and other relevant tools: The Open Modelling Interface (OpenMI). This paper describes the HarmonIT project and objectives in general. The current progress is described. It describes the roles for different types of stakeholders in modelling, varying from software coders to non-specialized users of decision support systems. It will provide insight in the requirements imposed when using the OpenMI.

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5

Boker, Steven, Michael Neale, Hermine Maes, Michael Wilde, Michael Spiegel, Timothy Brick, Jeffrey Spies, et al. "OpenMx: An Open Source Extended Structural Equation Modeling Framework." Psychometrika 76, no. 2 (January 6, 2011): 306–17. http://dx.doi.org/10.1007/s11336-010-9200-6.

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6

Buahin, Caleb A., and Jeffery S. Horsburgh. "Advancing the Open Modeling Interface (OpenMI) for integrated water resources modeling." Environmental Modelling & Software 108 (October 2018): 133–53. http://dx.doi.org/10.1016/j.envsoft.2018.07.015.

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7

Moore, Roger V., and C. Isabella Tindall. "An overview of the open modelling interface and environment (the OpenMI)." Environmental Science & Policy 8, no. 3 (June 2005): 279–86. http://dx.doi.org/10.1016/j.envsci.2005.03.009.

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8

Kim, Sang-il, and Hwa-sung Kim. "Similarity Comparison Among Open API Parameters Using Open API Description Document." Journal of Korean Institute of Communications and Information Sciences 41, no. 2 (February 29, 2016): 241–43. http://dx.doi.org/10.7840/kics.2016.41.2.241.

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9

Szczepanek, Robert. "Proposal of a Python interface to OpenMI, as the base for open source hydrological framework." Geoinformatics FCE CTU 7 (December 29, 2011): 93–106. http://dx.doi.org/10.14311/gi.7.8.

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Hydrologists need simple, yet powerful, open source framework for developing and testing mathematical models. Such framework should ensure long-term interoperability and high scalability. This can be done by implementation of the existing, already tested standards. At the moment two interesting options exist: Open Modelling Interface (OpenMI) and Object Modeling System (OMS). OpenMI was developed within the Fifth European Framework Programme for integrated watershed management, described in the Water Framework Directive. OpenMI interfaces are available for the C# and Java programming languages. OpenMI Association is now in the process of agreement with Open Geospatial Consortium (OGC), so the spatial standards existing in OpenMI 2.0 should be better implemented in the future. The OMS project is pure Java, object-oriented modeling framework coordinated by the U.S. Department of Agriculture. Big advantage of OMS compared to OpenMI is its simplicity of implementation. On the other hand, OpenMI seems to be more powerful and better suited for hydrological models. Finally, OpenMI model was selected as the base interface for the proposed open source hydrological framework. The existing hydrological libraries and models focus usually on just one GIS package (HydroFOSS – GRASS) or one operating system (HydroDesktop – Microsoft Windows). The new hydrological framework should break those limitations. To make hydrological models’ implementation as easy as possible, the framework should be based on a simple, high-level computer language. Low and mid-level languages, like Java (SEXTANTE) or C (GRASS, SAGA) were excluded, as too complicated for regular hydrologist. From popular, high-level languages, Python seems to be a good choice. Leading GIS desktop applications – GRASS and QGIS – use Python as second native language, providing well documented API. This way, a Python-based hydrological library could be easily integrated with any GIS package supporting this programming language. As the OpenMI 2.0 standard supported interfaces only for Java and C#, the Python interface for OpenMI standard, presented in this paper, is the first step done towards the open and interoperable hydrological framework. GIS-related issues of the OpenMI 2.0 standard are also outlined and discussed.

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10

Assmann, Sarah M. "OPEN STOMATA1 opens the door to ABA signaling in Arabidopsis guard cells." Trends in Plant Science 8, no. 4 (April 2003): 151–53. http://dx.doi.org/10.1016/s1360-1385(03)00052-9.

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11

Röst, Hannes L., Timo Sachsenberg, Stephan Aiche, Chris Bielow, Hendrik Weisser, Fabian Aicheler, Sandro Andreotti, et al. "OpenMS: a flexible open-source software platform for mass spectrometry data analysis." Nature Methods 13, no. 9 (August 30, 2016): 741–48. http://dx.doi.org/10.1038/nmeth.3959.

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12

Kopka, Wojciech. "Open BIM – IFC." Mechanik, no. 7 (July 2015): 562/425–562/434. http://dx.doi.org/10.17814/mechanik.2015.7.257.

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13

Lizaraso Caparó, Frank. "Acceso libre a la información." Horizonte Médico (Lima) 14, no. 3 (July 1, 2014): 4–5. http://dx.doi.org/10.24265/horizmed.2014.v14n3.01.

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14

Stump, Sandra L., and Rosemary L. Deegan. "Open Source Opens Doors: Repurposing Library Software to Facilitate Faculty Research and Collaboration." Pennsylvania Libraries: Research & Practice 1, no. 2 (October 14, 2013): 162–67. http://dx.doi.org/10.5195/palrap.2013.39.

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Asked to convert a faculty-created Microsoft Word document of biblical references found within popular films into a searchable database for scholars, the Albright College library staff helped create a multi-access database called Bible in the Reel World. The database relied on student workers for inputting data, used MARC standard formatting for future portability, and encouraged interactive feedback, enabling scholars to submit comments and suggest additional films and references. Using the open source integrated library system Koha, MarcEdit software, and free record exporting from IMDb, library staff created a fully-searchable database for researchers and scholars to examine the use of scripture in popular film.

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15

Mahfudin, Ikhsan, and Topan Setiadipura. "Criticality Analysis of HTR-10 using an Open Source Monte Carlo code OpenMC." Jurnal Pengembangan Energi Nuklir 22, no. 2 (December 29, 2020): 129. http://dx.doi.org/10.17146/jpen.2020.22.2.6104.

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As one of advance nuclear reactor design, capability to model and analyze the pebble bed reactor is important. Availability and capability of an accurate open source and open access software for pebble bed reactor analysis is strategic. It can broaden the involvement of more student and researcher which finally may improve the research and development in this field. Current study aim to develop the pebble bed core model and perform a criticality study of HTR-10 core design. This study exploit the capability of openMC software to model a double heterogenety geometry using a TRISO Pack Model Building based on random sequential packing and closed random packing. Physical parametric surveys of the developed model show an expected results in which the model able to reflect the negative reactivity feedback of HTR-10 design. The critical height of HTR-10 model with helium from current model, VSOP, and MCNP are 125.881 cm, 125.804 cm, 126.116 cm, respectively. A code-to-code criticality analysis comparison of current model with VSOP and MCNP code reported by INET shows a good comparison and suggest that current method can be used for further pebble bed analysis.

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16

齐, 永孟. "Large-Scale Simulation of the Open Channel Saint-Venant System Based on OpenMP." Computer Science and Application 11, no. 12 (2021): 2845–52. http://dx.doi.org/10.12677/csa.2021.1112289.

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17

Buchem, Ilona, and Oriol Borrás Gené. "Motivational effects of open badges in MOOCs. A learner perception study in OpenVM Learning Hub and MiriadaX." e-mentor 86, no. 4 (2020): 22–35. http://dx.doi.org/10.15219/em86.1479.

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Open Badges have become a metadata standard that has been used to transform digital credentialing practices in learning contexts including Massive Open Online Courses (MOOCs). Badges may be designed and used in diverse ways to enhance learner motivation in MOOCs. However, empirical research about the motivational effects of the badging process has been limited to anecdotal evidence. Objective: The goal of this study was to explore the motivational effects of open badges in MOOCs. The primary research question was whether and how open badges motivate participants to: a) learn in MOOCs, b) to complete MOOCs, and c) to use Open Badges outside of the MOOC environment. Method: An exploratory learner perception study was conducted in two platforms: OpenVM and MiriadaX. Both platforms issue Open Badges to recognize learning outcomes in MOOCs. The research sample included 1788 participants with diverse backgrounds, who participated in OpenVM (n = 1412) and in MiriadaX (n = 376) courses. Learner perceptions were self-reported via two online surveys, which included an aligned set of items in English (OpenVM) and Spanish (MiriadaX). Results: The findings show that regardless of the MOOC platform, the topic of the course and the language of instruction, MOOC participants were motivated by open badges, especially by an adequate description of the skills developed in the MOOCs. A regression analysis indicated that an adequate skill description in the open badges had the greatest predictive value for motivation to learn in MOOCs and to complete the course (r2 = 56.3%). The instrument with five items showed high internal consistency (α = 0.92).

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18

Jin, Fengtao, and Jianmin Yuan. "Detailed diagnostics for a hot bromine plasma by the openM-shell opacity." Physical Review E 72, no. 1 (July 26, 2005). http://dx.doi.org/10.1103/physreve.72.016404.

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19

"Open Innovation Field Opens Up." Chemical & Engineering News Archive 92, no. 14 (April 7, 2014): 21–23. http://dx.doi.org/10.1021/cen-09214-bus1.

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20

Sturm, Marc, Andreas Bertsch, Clemens Gröpl, Andreas Hildebrandt, Rene Hussong, Eva Lange, Nico Pfeifer, et al. "OpenMS – An open-source software framework for mass spectrometry." BMC Bioinformatics 9, no. 1 (March 26, 2008). http://dx.doi.org/10.1186/1471-2105-9-163.

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21

Hackett, Matthew. "OpenMG: An Open-Source Middleware Interface for Gesture Recognition." SSRN Electronic Journal, 2021. http://dx.doi.org/10.2139/ssrn.3818462.

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22

Nihon Bika Gakkai Kaishi (Japanese Journal of Rhinology) 53, no. 1 (2014): 32–34. http://dx.doi.org/10.7248/jjrhi.53.32.

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23

Wang, Yaojun, Fei Yang, Peng Wu, Dongbo Bu, and Shiwei Sun. "OpenMS-Simulator: an open-source software for theoretical tandem mass spectrum prediction." BMC Bioinformatics 16, no. 1 (April 2, 2015). http://dx.doi.org/10.1186/s12859-015-0540-1.

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24

Gottinger, Hans W. "Open Source Technologies." Advances in Social Sciences Research Journal 4, no. 7 (April 25, 2017). http://dx.doi.org/10.14738/assrj.47.2312.

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25

Tseng, Jennifer, and Mitchell Posner. "Open Transhiatal Esophagectomy." CSurgeries, March 2016. http://dx.doi.org/10.17797/6ob5owtokl.

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26

Journal of Japan Society for Fuzzy Theory and Intelligent Informatics 19, no. 3 (2007): 267. http://dx.doi.org/10.3156/jsoft.19.3_267_1.

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27

"Brief view of chi and alternative therapy." Oriental Pharmacy and Experimental Medicine 2, no. 1 (February 1, 2002): 1–16. http://dx.doi.org/10.3742/opem.2002.2.1.001.

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28

"Complementary and alternative therapies for obesity." Oriental Pharmacy and Experimental Medicine 2, no. 1 (February 1, 2002): 17–27. http://dx.doi.org/10.3742/opem.2002.2.1.017.

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29

"Beneficial and adverse effects of toad venom, a traditional Oriental medicine." Oriental Pharmacy and Experimental Medicine 2, no. 1 (February 1, 2002): 28–35. http://dx.doi.org/10.3742/opem.2002.2.1.028.

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30

"Effect of Herba Epimedii on hydrogen peroxide induced neurotoxicity in cultured rat dorsal root ganglion neurons." Oriental Pharmacy and Experimental Medicine 2, no. 1 (February 1, 2002): 36–40. http://dx.doi.org/10.3742/opem.2002.2.1.036.

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31

"The inhibitory effects of Gami-Phedoc-San on TNF-α, IL-1β and IFN-γ secretion from human monocytes." Oriental Pharmacy and Experimental Medicine 2, no. 1 (February 1, 2002): 41–46. http://dx.doi.org/10.3742/opem.2002.2.1.041.

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32

"Inhibitory effect of Se-Yeon-Eum on nicotine- and cigarette smoke extract induced cytotoxicity in human lung fibroblast." Oriental Pharmacy and Experimental Medicine 2, no. 1 (February 1, 2002): 47–51. http://dx.doi.org/10.3742/opem.2002.2.1.047.

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33

"Antitumor evaluation and antimicrobial activity of geranyl phenyl ethers." Oriental Pharmacy and Experimental Medicine 2, no. 1 (February 1, 2002): 52–57. http://dx.doi.org/10.3742/opem.2002.2.1.052.

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34

"Effect of Rubus coreanus Miq. fruit extract on compound 48/80-induced anaphylactic reactions." Oriental Pharmacy and Experimental Medicine 2, no. 1 (February 1, 2002): 58–63. http://dx.doi.org/10.3742/opem.2002.2.1.058.

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35

"Myxochelin A, a cytotoxic antibiotic from the myxobacterium Angiococcus disciformis." Oriental Pharmacy and Experimental Medicine 2, no. 1 (February 1, 2002): 64–67. http://dx.doi.org/10.3742/opem.2002.2.1.064.

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36

"Examination of the nitric oxide production-suppressing activity in Sanguisorbae Radix." Oriental Pharmacy and Experimental Medicine 2, no. 2 (August 30, 2002): 69–79. http://dx.doi.org/10.3742/opem.2002.2.2.069.

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37

"Is ginseng free from adverse effects?" Oriental Pharmacy and Experimental Medicine 2, no. 2 (August 30, 2002): 80–86. http://dx.doi.org/10.3742/opem.2002.2.2.080.

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38

"Differential role of endothelium in hawthorn fruit extract-induced relaxation of rat cerebral, coronary, carotid, and aorta." Oriental Pharmacy and Experimental Medicine 2, no. 2 (August 30, 2002): 87–93. http://dx.doi.org/10.3742/opem.2002.2.2.087.

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39

"Antifibrotic effects of oriental herbs GLM001 on liver cirrhosis induced by bile duct ligation." Oriental Pharmacy and Experimental Medicine 2, no. 2 (August 30, 2002): 94–100. http://dx.doi.org/10.3742/opem.2002.2.2.094.

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40

"Central nervous system depressant effect of hot water extract of Ocimum sanctum Linn. (Labiateae)." Oriental Pharmacy and Experimental Medicine 2, no. 2 (August 30, 2002): 101–5. http://dx.doi.org/10.3742/opem.2002.2.2.101.

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41

"Magnoliae Cortex inhibits immediate-type allergic reactions." Oriental Pharmacy and Experimental Medicine 2, no. 2 (August 30, 2002): 106–12. http://dx.doi.org/10.3742/opem.2002.2.2.106.

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42

"The immune-enhancement effect by Falun Gong cultivation." Oriental Pharmacy and Experimental Medicine 2, no. 2 (August 30, 2002): 113–18. http://dx.doi.org/10.3742/opem.2002.2.2.113.

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43

"Ciga-X inhibits nicotine-induced human lung fibroblasts cytotoxicity and craving for cigarettes." Oriental Pharmacy and Experimental Medicine 2, no. 2 (August 30, 2002): 119–24. http://dx.doi.org/10.3742/opem.2002.2.2.119.

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44

"Inhibitory effects of Korean plant resources on human immunodeficiency virus type 1 protease activity." Oriental Pharmacy and Experimental Medicine 3, no. 1 (February 2003): 1–7. http://dx.doi.org/10.3742/opem.2003.3.1.001.

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45

"Neuropharmacological study of some Ayurvedic medicinal plants." Oriental Pharmacy and Experimental Medicine 3, no. 1 (February 2003): 8–17. http://dx.doi.org/10.3742/opem.2003.3.1.008.

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46

"Highly purified chitosan reduce blood alcohol concentration, aspartate aminotransferase, and alanine aminotransferase levels in human." Oriental Pharmacy and Experimental Medicine 3, no. 1 (February 2003): 18–20. http://dx.doi.org/10.3742/opem.2003.3.1.018.

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47

"Pharmacological study of 'treenoponchomul'-an Ayurvedic diuretic preparation." Oriental Pharmacy and Experimental Medicine 3, no. 1 (February 2003): 21–28. http://dx.doi.org/10.3742/opem.2003.3.1.021.

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48

"Reductive effect of body weight in rats fed a high-fat diet by Sense-line." Oriental Pharmacy and Experimental Medicine 3, no. 1 (February 2003): 29–33. http://dx.doi.org/10.3742/opem.2003.3.1.029.

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49

"Immune-enhancement effect of JaSaengHwan." Oriental Pharmacy and Experimental Medicine 3, no. 1 (February 2003): 34–39. http://dx.doi.org/10.3742/opem.2003.3.1.034.

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50

"Effect of Bamboo salt-pro on carries-inducing properties of Streptococcus mutans." Oriental Pharmacy and Experimental Medicine 3, no. 1 (February 2003): 40–45. http://dx.doi.org/10.3742/opem.2003.3.1.040.

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