Academic literature on the topic 'ORF8 accessory gene'

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Journal articles on the topic "ORF8 accessory gene"

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Pereira, Filipe. "Evolutionary dynamics of the SARS-CoV-2 ORF8 accessory gene." Infection, Genetics and Evolution 85 (November 2020): 104525. http://dx.doi.org/10.1016/j.meegid.2020.104525.

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Tabibzadeh, Alireza, Mohammad Hadi Karbalaie Niya, Hossein Keyvani, et al. "A survey of ORF8 sequence and immunoinformatics features during alpha, delta, and wild type peaks of the SARS-CoV-2 pandemic in Iran." Malawi Medical Journal 35, no. 2 (2023): 101–5. http://dx.doi.org/10.4314/mmj.v35i2.5.

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BackgroundThe Coronavirus disease 2019 (COVID-19) pandemic influences all around the world. The SARS-CoV-2 ORF8 accessory gene represents multiple functions in virus-host interaction. The current study aimed to compare the ORF8 substitutions and epitope features of these substitutions in the various SARS-CoV-2 outbreaks including delta, alpha, and wild type variants in Iran from 2020 to 2022. In addition, we evaluate B cell, HLA I and II epitopes, by in-silico approach to ORF8 binding site prediction.MethodsThe samples were collected from patients diagnosed with SARS-CoV-2 infection via a real
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Wang, Ning, Chuming Luo, Haizhou Liu, et al. "Characterization of a New Member of Alphacoronavirus with Unique Genomic Features in Rhinolophus Bats." Viruses 11, no. 4 (2019): 379. http://dx.doi.org/10.3390/v11040379.

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Bats have been identified as a natural reservoir of a variety of coronaviruses (CoVs). Several of them have caused diseases in humans and domestic animals by interspecies transmission. Considering the diversity of bat coronaviruses, bat species and populations, we expect to discover more bat CoVs through virus surveillance. In this study, we described a new member of alphaCoV (BtCoV/Rh/YN2012) in bats with unique genome features. Unique accessory genes, ORF4a and ORF4b were found between the spike gene and the envelope gene, while ORF8 gene was found downstream of the nucleocapsid gene. All th
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Wang, Ning, Chuming Luo, Haizhou Liu, et al. "Characterization of a New Member of Alphacoronavirus with Unique Genomic Features in Rhinolophus Bats." Viruses 11, no. 4 (2019): 379. https://doi.org/10.5281/zenodo.13508473.

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(Uploaded by Plazi for the Bat Literature Project) Bats have been identified as a natural reservoir of a variety of coronaviruses (CoVs). Several of them have caused diseases in humans and domestic animals by interspecies transmission. Considering the diversity of bat coronaviruses, bat species and populations, we expect to discover more bat CoVs through virus surveillance. In this study, we described a new member of alphaCoV (BtCoV/Rh/YN2012) in bats with unique genome features. Unique accessory genes, ORF4a and ORF4b were found between the spike gene and the envelope gene, while ORF8 gene wa
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5

Wang, Ning, Chuming Luo, Haizhou Liu, et al. "Characterization of a New Member of Alphacoronavirus with Unique Genomic Features in Rhinolophus Bats." Viruses 11, no. 4 (2019): 379. https://doi.org/10.5281/zenodo.13508473.

Full text
Abstract:
(Uploaded by Plazi for the Bat Literature Project) Bats have been identified as a natural reservoir of a variety of coronaviruses (CoVs). Several of them have caused diseases in humans and domestic animals by interspecies transmission. Considering the diversity of bat coronaviruses, bat species and populations, we expect to discover more bat CoVs through virus surveillance. In this study, we described a new member of alphaCoV (BtCoV/Rh/YN2012) in bats with unique genome features. Unique accessory genes, ORF4a and ORF4b were found between the spike gene and the envelope gene, while ORF8 gene wa
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6

Wang, Ning, Chuming Luo, Haizhou Liu, et al. "Characterization of a New Member of Alphacoronavirus with Unique Genomic Features in Rhinolophus Bats." Viruses 11, no. 4 (2019): 379. https://doi.org/10.5281/zenodo.13508473.

Full text
Abstract:
(Uploaded by Plazi for the Bat Literature Project) Bats have been identified as a natural reservoir of a variety of coronaviruses (CoVs). Several of them have caused diseases in humans and domestic animals by interspecies transmission. Considering the diversity of bat coronaviruses, bat species and populations, we expect to discover more bat CoVs through virus surveillance. In this study, we described a new member of alphaCoV (BtCoV/Rh/YN2012) in bats with unique genome features. Unique accessory genes, ORF4a and ORF4b were found between the spike gene and the envelope gene, while ORF8 gene wa
APA, Harvard, Vancouver, ISO, and other styles
7

Wang, Ning, Chuming Luo, Haizhou Liu, et al. "Characterization of a New Member of Alphacoronavirus with Unique Genomic Features in Rhinolophus Bats." Viruses 11, no. 4 (2019): 379. https://doi.org/10.5281/zenodo.13508473.

Full text
Abstract:
(Uploaded by Plazi for the Bat Literature Project) Bats have been identified as a natural reservoir of a variety of coronaviruses (CoVs). Several of them have caused diseases in humans and domestic animals by interspecies transmission. Considering the diversity of bat coronaviruses, bat species and populations, we expect to discover more bat CoVs through virus surveillance. In this study, we described a new member of alphaCoV (BtCoV/Rh/YN2012) in bats with unique genome features. Unique accessory genes, ORF4a and ORF4b were found between the spike gene and the envelope gene, while ORF8 gene wa
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8

Lo, Van Thi, Sun Woo Yoon, Yong Gun Choi, Dae Gwin Jeong, and Hye Kwon Kim. "Genomic Comparisons of Alphacoronaviruses and Betacoronaviruses from Korean Bats." Viruses 14, no. 7 (2022): 1389. http://dx.doi.org/10.3390/v14071389.

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Coronaviruses are well known as a diverse family of viruses that affect a wide range of hosts. Since the outbreak of severe acute respiratory syndrome, a variety of bat-associated coronaviruses have been identified in many countries. However, they do not represent all the specific geographic locations of their hosts. In this study, full-length genomes representing newly identified bat coronaviruses in South Korea were obtained using an RNA sequencing approach. The analysis, based on genome structure, conserved replicase domains, spike gene, and nucleocapsid genes revealed that bat Alphacoronav
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9

Lo, Van Thi, Sun Woo Yoon, Yong Gun Choi, Dae Gwin Jeong, and Hye Kwon Kim. "Genomic Comparisons of Alphacoronaviruses and Betacoronaviruses from Korean Bats." Viruses 14, no. 7 (2022): 1389. https://doi.org/10.5281/zenodo.13445916.

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Abstract:
(Uploaded by Plazi for the Bat Literature Project) Coronaviruses are well known as a diverse family of viruses that affect a wide range of hosts. Since the outbreak of severe acute respiratory syndrome, a variety of bat-associated coronaviruses have been identified in many countries. However, they do not represent all the specific geographic locations of their hosts. In this study, full-length genomes representing newly identified bat coronaviruses in South Korea were obtained using an RNA sequencing approach. The analysis, based on genome structure, conserved replicase domains, spike gene, an
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10

Lo, Van Thi, Sun Woo Yoon, Yong Gun Choi, Dae Gwin Jeong, and Hye Kwon Kim. "Genomic Comparisons of Alphacoronaviruses and Betacoronaviruses from Korean Bats." Viruses 14, no. 7 (2022): 1389. https://doi.org/10.5281/zenodo.13445916.

Full text
Abstract:
(Uploaded by Plazi for the Bat Literature Project) Coronaviruses are well known as a diverse family of viruses that affect a wide range of hosts. Since the outbreak of severe acute respiratory syndrome, a variety of bat-associated coronaviruses have been identified in many countries. However, they do not represent all the specific geographic locations of their hosts. In this study, full-length genomes representing newly identified bat coronaviruses in South Korea were obtained using an RNA sequencing approach. The analysis, based on genome structure, conserved replicase domains, spike gene, an
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Dissertations / Theses on the topic "ORF8 accessory gene"

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D'Angelillo, Anna. "Studio dell'€™attività biologica della proteina ORF-A del virus dell'€™immunodeficienza felina." Doctoral thesis, Università degli studi di Padova, 2013. http://hdl.handle.net/11577/3423592.

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Feline Immunodeficiency Virus (FIV), a non-primate lentivirus, causes an immunodeficiency syndrome in domestic cats that is strikingly similar to AIDS in humans. Although diverse in term of evolution, FIV is similar to Human Immunodeficiency Virus Type-1 (HIV-1) in many respects including genome organization, target cells infected in vivo, course of infection and disease state. Thus, for these reasons, FIV represents an attractive model for AIDS research. Similarly to HIV-1 and other lentivirus, the FIV genome encodes three large open reading frame gag, pol, env that encode for the structural
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Book chapters on the topic "ORF8 accessory gene"

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Hussain, Firasat, Hamid Ali, Ateeqah Siddique, et al. "Host Genetic Diversity of SARS-CoV." In From SARS-CoV to MARS-CoV. BENTHAM SCIENCE PUBLISHERS, 2024. https://doi.org/10.2174/9789815274943124010006.

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SARS-CoV has an RNA genome that is categorized in the family <i>Coronavirida</i>e and the order <i>Nidovirale</i>s. Similarly, Severe Acute Respiratory Syndrome Coronavirus-2 (SARS-CoV-2) also belongs to this family and order. A significant degree of variability was observed in SARS-CoV-2 in individuals, which could be influenced by genetic variations in the host. This may impact the progression of sickness and the efficacy of treatment approaches. Individuals who carry certain mutants of genes (ACE2 and TMPRSS) directly linked to viral illness or who have a distinctive
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