Journal articles on the topic 'Parallel profiling tool'
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Qawasmeh, Ahmad, Salah Taamneh, Ashraf H. Aljammal, Nabhan Hamadneh, Mustafa Banikhalaf, and Mohammad Kharabsheh. "Parallelism exploration in sequential algorithms via animation tool." Multiagent and Grid Systems 17, no. 2 (2021): 145–58. http://dx.doi.org/10.3233/mgs-210347.
Full textIshiya, Koji, and Shintaroh Ueda. "MitoSuite: a graphical tool for human mitochondrial genome profiling in massive parallel sequencing." PeerJ 5 (May 30, 2017): e3406. http://dx.doi.org/10.7717/peerj.3406.
Full textBONE, PAUL, ZOLTAN SOMOGYI, and PETER SCHACHTE. "Estimating the overlap between dependent computations for automatic parallelization." Theory and Practice of Logic Programming 11, no. 4-5 (2011): 575–91. http://dx.doi.org/10.1017/s1471068411000184.
Full textReinartz, Jeannette, Eddy Bruyns, Jing-Zhong Lin, et al. "Massively parallel signature sequencing (MPSS) as a tool for in-depth quantitative gene expression profiling in all organisms." Briefings in Functional Genomics 1, no. 1 (2002): 95–104. http://dx.doi.org/10.1093/bfgp/1.1.95.
Full textWierbowski, Shayne D., Tommy V. Vo, Pascal Falter-Braun, et al. "A massively parallel barcoded sequencing pipeline enables generation of the first ORFeome and interactome map for rice." Proceedings of the National Academy of Sciences 117, no. 21 (2020): 11836–42. http://dx.doi.org/10.1073/pnas.1918068117.
Full textAparicio-Puerta, Ernesto, Ricardo Lebrón, Antonio Rueda, et al. "sRNAbench and sRNAtoolbox 2019: intuitive fast small RNA profiling and differential expression." Nucleic Acids Research 47, W1 (2019): W530—W535. http://dx.doi.org/10.1093/nar/gkz415.
Full textLiu, G. F., H. J. Cheng, W. You, E. L. Song, X. M. Liu, and F. C. Wan. "Transcriptome profiling of muscle by RNA-Seq reveals significant differences in digital gene expression profiling between Angus and Luxi cattle." Animal Production Science 55, no. 9 (2015): 1172. http://dx.doi.org/10.1071/an14096.
Full textKrainer, Julie, Andreas Weinhäusel, Karel Hanak, et al. "EPIC-TABSAT: analysis tool for targeted bisulfite sequencing experiments and array-based methylation studies." Nucleic Acids Research 47, W1 (2019): W166—W170. http://dx.doi.org/10.1093/nar/gkz398.
Full textSgorbini, Barbara, Cecilia Cagliero, Lorenzo Boggia, et al. "Parallel dual secondary-column-dual detection comprehensive two-dimensional gas chromatography: a flexible and reliable analytical tool for essential oils quantitative profiling." Flavour and Fragrance Journal 30, no. 5 (2015): 366–80. http://dx.doi.org/10.1002/ffj.3255.
Full textZhao, Shanrong, Kurt Prenger, and Lance Smith. "Stormbow: A Cloud-Based Tool for Reads Mapping and Expression Quantification in Large-Scale RNA-Seq Studies." ISRN Bioinformatics 2013 (September 12, 2013): 1–8. http://dx.doi.org/10.1155/2013/481545.
Full textZhao, Weiqiang, Jorge Cortes, Christina Hannah, Hagop M. Kantarjian, and Dan Jones. "Kinase Profiling as a Tool in Molecular Dissection of Imatinib Resistant Chronic Myeloid Leukemia (CML)." Blood 108, no. 11 (2006): 2337. http://dx.doi.org/10.1182/blood.v108.11.2337.2337.
Full textBoyle, Evan A., Johan O. L. Andreasson, Lauren M. Chircus, et al. "High-throughput biochemical profiling reveals sequence determinants of dCas9 off-target binding and unbinding." Proceedings of the National Academy of Sciences 114, no. 21 (2017): 5461–66. http://dx.doi.org/10.1073/pnas.1700557114.
Full textKhor, Jian Ming, Jennifer Guerrero-Santoro, William Douglas, and Charles A. Ettensohn. "Global patterns of enhancer activity during sea urchin embryogenesis assessed by eRNA profiling." Genome Research 31, no. 9 (2021): 1680–92. http://dx.doi.org/10.1101/gr.275684.121.
Full textCao, M., K. W. Wang, Y. Fujii, and W. E. Tobler. "Development of a Friction Component Model for Automotive Powertrain System Analysis and Shift Controller Design based on Parallel-Modulated Neural Networks." Journal of Dynamic Systems, Measurement, and Control 127, no. 3 (2004): 382–405. http://dx.doi.org/10.1115/1.1978909.
Full textYazdanbakhsh, Nima, and Joachim Fisahn. "High throughput phenotyping of root growth dynamics, lateral root formation, root architecture and root hair development enabled by PlaRoM." Functional Plant Biology 36, no. 11 (2009): 938. http://dx.doi.org/10.1071/fp09167.
Full textTsui, Nancy B. Y., Peiyong Jiang, Yuen Fei Wong, et al. "Maternal Plasma RNA Sequencing for Genome-Wide Transcriptomic Profiling and Identification of Pregnancy-Associated Transcripts." Clinical Chemistry 60, no. 7 (2014): 954–62. http://dx.doi.org/10.1373/clinchem.2014.221648.
Full textChan, KC Allen, Peiyong Jiang, Yama WL Zheng, et al. "Cancer Genome Scanning in Plasma: Detection of Tumor-Associated Copy Number Aberrations, Single-Nucleotide Variants, and Tumoral Heterogeneity by Massively Parallel Sequencing." Clinical Chemistry 59, no. 1 (2013): 211–24. http://dx.doi.org/10.1373/clinchem.2012.196014.
Full textChurkin, A. A., and I. N. Lozovsky. "QUALITY ASSURANCE OF DIAPHRAGM AND PILE WALLS BY GEOPHYSICS." Construction and Geotechnics 11, no. 2 (2020): 49–61. http://dx.doi.org/10.15593/2224-9826/2020.2.05.
Full textWang, Yuying, Jianchao Zheng, Zhilong Li, et al. "Development of a novel liquid biopsy test to diagnose and locate gastrointestinal cancers." Journal of Clinical Oncology 38, no. 15_suppl (2020): 1557. http://dx.doi.org/10.1200/jco.2020.38.15_suppl.1557.
Full textStenson, Martin, Ulla Ruetschi, Sverker Hasselblom, Herman Nilsson-Ehle, and P.-O. Andersson. "Can Global Protein Expression Profiling Determine Prognosis in Diffuse Large B-Cell Lymphoma?" Blood 120, no. 21 (2012): 1537. http://dx.doi.org/10.1182/blood.v120.21.1537.1537.
Full textGasper, F., K. Goergen, P. Shrestha, et al. "Implementation and scaling of the fully coupled Terrestrial Systems Modeling Platform (TerrSysMP v1.0) in a massively parallel supercomputing environment – a case study on JUQUEEN (IBM Blue Gene/Q)." Geoscientific Model Development 7, no. 5 (2014): 2531–43. http://dx.doi.org/10.5194/gmd-7-2531-2014.
Full textBielecka, Monika, Bartosz Pencakowski, Marta Stafiniak, et al. "Metabolomics and DNA-Based Authentication of Two Traditional Asian Medicinal and Aromatic Species of Salvia subg. Perovskia." Cells 10, no. 1 (2021): 112. http://dx.doi.org/10.3390/cells10010112.
Full textKim, Min Jung, Jihye Lee, Seon Hee Kim, Haidong Kim, Kang-Bong Lee, and Yeonhee Lee. "Detection of Matrix Elements and Trace Impurities in Cu(In, Ga)Se2 Photovoltaic Absorbers Using Surface Analytical Techniques." Journal of Nanoscience and Nanotechnology 15, no. 10 (2015): 7722–26. http://dx.doi.org/10.1166/jnn.2015.11181.
Full textBielecka, Monika, Bartosz Pencakowski, Marta Stafiniak, et al. "Metabolomics and DNA-Based Authentication of Two Traditional Asian Medicinal and Aromatic Species of Salvia subg. Perovskia." Cells 10, no. 1 (2021): 112. http://dx.doi.org/10.3390/cells10010112.
Full textFreeman, Sylvie D., and Christopher S. Hourigan. "MRD evaluation of AML in clinical practice: are we there yet?" Hematology 2019, no. 1 (2019): 557–69. http://dx.doi.org/10.1182/hematology.2019000060.
Full textVladimer, Gregory Ian, Christian Schmidl, Andre Renderio, et al. "Integrated ATAC-Seq and Chemosensitivity Profiling Identifies Rational Drug Combinations in Ibrutinib-Treated CLL Patients." Blood 130, Suppl_1 (2017): 800. http://dx.doi.org/10.1182/blood.v130.suppl_1.800.800.
Full textSPOONHOWER, DANIEL, GUY E. BLELLOCH, ROBERT HARPER, and PHILLIP B. GIBBONS. "Space profiling for parallel functional programs." Journal of Functional Programming 20, no. 5-6 (2010): 417–61. http://dx.doi.org/10.1017/s0956796810000146.
Full textGill, Upkar S., Laura J. Pallett, Niclas Thomas, et al. "Fine needle aspirates comprehensively sample intrahepatic immunity." Gut 68, no. 8 (2018): 1493–503. http://dx.doi.org/10.1136/gutjnl-2018-317071.
Full textHaferlach, Torsten, Alexander Kohlmann, Susanne Schnittger, et al. "All Clinically Relevant Leukemia Subtypes Can Be Diagnosed and Classified Based Solely on Gene Expression Profiling with an Accuracy of 95.1%: A Study on 1337 Adult Patients." Blood 104, no. 11 (2004): 143. http://dx.doi.org/10.1182/blood.v104.11.143.143.
Full textCargo, Catherine, Matt Cullen, Jan Taylor, Mike Short, Paul Evans, and Simon Crouch. "Mutational Profiling of Peripheral Blood and Bone Marrow Samples Discriminates Reactive Monocytosis from Chronic Myelomonocytic Leukaemia." Blood 128, no. 22 (2016): 3181. http://dx.doi.org/10.1182/blood.v128.22.3181.3181.
Full textKonecny, Gottfried E., Chen Wang, Boris Winterhoff, et al. "Prognostic relevance of gene signatures in high-grade serous ovarian carcinoma." Journal of Clinical Oncology 31, no. 15_suppl (2013): 5510. http://dx.doi.org/10.1200/jco.2013.31.15_suppl.5510.
Full textHynst, Jakub, Karla Plevova, Lenka Radova, Vojtech Bystry, Karol Pal, and Sarka Pospisilova. "Bioinformatic pipelines for whole transcriptome sequencing data exploitation in leukemia patients with complex structural variants." PeerJ 7 (June 12, 2019): e7071. http://dx.doi.org/10.7717/peerj.7071.
Full textSilva, Vítor, Leonardo Neves, Renan Souza, Alvaro L. G. A. Coutinho, Daniel de Oliveira, and Marta Mattoso. "Adding domain data to code profiling tools to debug workflow parallel execution." Future Generation Computer Systems 110 (September 2020): 422–39. http://dx.doi.org/10.1016/j.future.2018.05.078.
Full textMAHAJAN, REEMA, DIETER KRANZLMÜLLER, JENS VOLKERT, ULRICH H. E. HANSMANN, and SIEGFRIED HÖFINGER. "DETECTING SECONDARY BOTTLENECKS IN PARALLEL QUANTUM CHEMISTRY APPLICATIONS USING MPI." International Journal of Modern Physics C 19, no. 01 (2008): 1–13. http://dx.doi.org/10.1142/s0129183108011899.
Full textCario, Gunnar, Andre Schrauder, Anja Moericke, Jean-Pierre Bourquin, Martin Schrappe, and Martin Stanulla. "Early Diagnosis and Molecular-Based Treatment of Very Highly Resistant Acute Lymphoblastic Leukemia in Childhood." Blood 112, no. 11 (2008): 754. http://dx.doi.org/10.1182/blood.v112.11.754.754.
Full textGeng, Huimin, Brice Tiret, Hua-Xin Gao, et al. "Application of Hyperpolarized 13C Magnetic Resonance Imaging to Detect Target Inhibition of NFkB Activation in Preclinical Patient-Derived Models of CNS Lymphoma." Blood 132, Supplement 1 (2018): 2840. http://dx.doi.org/10.1182/blood-2018-99-117625.
Full textJacobs, Cassandra L., Dereje D. Jima, Jenny Zhang, et al. "A Comprehensive Identification of the Microrna Transcriptome and Its Application in B Cell Malignancies." Blood 114, no. 22 (2009): 2403. http://dx.doi.org/10.1182/blood.v114.22.2403.2403.
Full textCarlet, Michela, Jenny Vergalli, Cornelia Finkenzeller, Michaela Grunert, and Irmela Jeremias. "The Novel Technique of Genetically Engineered Patient-Derived Xenografts (GEPDX) Reveals That the X-Linked Inhibitor of Apoptosis Protein (XIAP) Plays an Essential Role for Maintenance and Growth of Patients' Acute Lymphoblastic Leukemia In Vivo." Blood 126, no. 23 (2015): 2632. http://dx.doi.org/10.1182/blood.v126.23.2632.2632.
Full textLim, Ha Jin, Jun Hyung Lee, Ju-Hyeon Shin, et al. "Diagnostic Validation of a Clinical Laboratory-Oriented Targeted RNA Sequencing System As a Comprehensive Assay for Hematologic Malignancies." Blood 136, Supplement 1 (2020): 38–39. http://dx.doi.org/10.1182/blood-2020-142264.
Full textMercier, Francois, Jiantao Shi, David Sykes, et al. "Identification of a Gene Expression Signature Characterizing Clonal Fitness and Dominance in Vivo in a Murine Model of MLL-AF9 Leukemia." Blood 124, no. 21 (2014): 2383. http://dx.doi.org/10.1182/blood.v124.21.2383.2383.
Full textWannachalee, Taweesak, and Adina F. Turcu. "Developments in Primary Aldosteronism Subtyping Using Steroid Profiling." Hormone and Metabolic Research 52, no. 06 (2020): 373–78. http://dx.doi.org/10.1055/a-1141-3526.
Full textHurtado López, Ana M., Tzu Hua Chen-Liang, Joaquín Panadero, et al. "TFDP3and DDX53 are Highly Re-Expressed after One Cycle of Azacitidine in Myelodysplastic Syndrome Patients Achieving Complete Response: A Cancer Testis Antigen RNA-Seq Screening." Blood 132, Supplement 1 (2018): 4340. http://dx.doi.org/10.1182/blood-2018-99-117851.
Full textGnatenko, Dmitri V., Peter L. Perrotta, and Wadie F. Bahou. "Proteomic approaches to dissect platelet function: half the story." Blood 108, no. 13 (2006): 3983–91. http://dx.doi.org/10.1182/blood-2006-06-026518.
Full textLehnert, S. A., Y. H. Wang, S. H. Tan, and A. Reverter. "Gene expression-based approaches to beef quality research." Australian Journal of Experimental Agriculture 46, no. 2 (2006): 165. http://dx.doi.org/10.1071/ea05226.
Full textMorlock, Gertrud E., Julia Heil, Antonio M. Inarejos-Garcia, and Jens Maeder. "Effect-Directed Profiling of Powdered Tea Extracts for Catechins, Theaflavins, Flavonols and Caffeine." Antioxidants 10, no. 1 (2021): 117. http://dx.doi.org/10.3390/antiox10010117.
Full textSharples, Wendy, Ilya Zhukov, Markus Geimer, et al. "A run control framework to streamline profiling, porting, and tuning simulation runs and provenance tracking of geoscientific applications." Geoscientific Model Development 11, no. 7 (2018): 2875–95. http://dx.doi.org/10.5194/gmd-11-2875-2018.
Full textGasper, F., K. Goergen, S. Kollet, et al. "Implementation and scaling of the fully coupled Terrestrial Systems Modeling Platform (TerrSysMP) in a massively parallel supercomputing environment – a case study on JUQUEEN (IBM Blue Gene/Q)." Geoscientific Model Development Discussions 7, no. 3 (2014): 3545–73. http://dx.doi.org/10.5194/gmdd-7-3545-2014.
Full textZielinska, Agnieszka K., Kenton Leigh, Horacio Gomez, and Ryan K. Van Laar. "Validation of the Nextseq 500 and Development of a High-Throughput NGS Pipeline for Identifying Clinically-Relevant Gene Variants in Multiple Myeloma Specimens." Blood 126, no. 23 (2015): 5346. http://dx.doi.org/10.1182/blood.v126.23.5346.5346.
Full textDolnik, Anna, Andreas Gerhardinger, Ursula Botzenhardt, et al. "Genome-Wide Analysis of Alternative Splicing Points to Novel Leukemia Relevant Genes in Acute Myeloid Leukemia." Blood 114, no. 22 (2009): 2391. http://dx.doi.org/10.1182/blood.v114.22.2391.2391.
Full textAuder, Benjamin, Jairo Cugliari, Yannig Goude, and Jean-Michel Poggi. "Scalable Clustering of Individual Electrical Curves for Profiling and Bottom-Up Forecasting." Energies 11, no. 7 (2018): 1893. http://dx.doi.org/10.3390/en11071893.
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