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1

Robinson, Mark W., and John P. Dalton, eds. Cysteine Proteases of Pathogenic Organisms. Boston, MA: Springer US, 2011. http://dx.doi.org/10.1007/978-1-4419-8414-2.

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2

Cysteine proteases of pathogenic organisms. New York: Springer Science+Business Media, 2011.

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3

Yeasts and yeast-like organisms. Weinheim, Federal Republic of Germany: VCH, 1990.

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4

Smith, Mary M. Genus and species of pathogenic organisms: A spelling guide to medical binomial terminology. Jefferson, N.C: McFarland, 1991.

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5

H, Collins C., and Grange John M, eds. Isolation and identification of micro-organisms of medical and veterinary importance. London: Academic Press, 1985.

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6

U.S.-Japan Meeting on Aquaculture (29th 2000 Ise, Mie, Japan). Pathogenic organisms and disease prevention: Proceedings of the twenty-ninth U.S.-Japan Meeting on Aquaculture, Ise, Mie, Japan, November 7 and 8, 2000. [Mie, Japan]: National Research Institute of Aquaculture (NRIA) and Fisheries Agency, 2001.

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7

M, Smulders Frans J., ed. Elimination of pathogenic organisms from meat and poultry: Proceedings of the International Symposium : Prevention of Contamination, and Decontamination in the Meat Industry, Zeist, The Netherlands, 2-4 June 1986. Amsterdam: Elsevier, 1987.

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8

Association, American Water Works, ed. Waterborne pathogens. 2nd ed. Denver, CO: American Water Works Association, 2006.

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9

Campbell, R. E. Biological control of microbial plant pathogens. Cambridge: Cambridge University Press, 1989.

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10

Molecular detection of human bacterial pathogens. Boca Raton, FL: Taylor & Francis/CRC Press, 2011.

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11

Kroll, Dorothy. The growing food testing business: Highlighting pathogens, pesticides, GMOS. Norwalk, CT: Business Communications Co., 2001.

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12

Brazil) Encontro Brasileiro de Patologistas de Organismos Aquáticos (5th 1998 Maringá. Resumos: V Encontro Brasileiro de Patologistas de Organismos Aquáticos : I Encontro Latino-Americano de Patologistas de Organismos Aquáticos : 21 a 24 de setembro de 1998, Maringá, Paraná, Brasil. Maringá, Pr. Brasil: Associação Brasileira de Patologistas de Organismos Aquáticos, 1998.

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13

Ewing, W. N. The living gut: An introduction to micro-organisms in nutrition. Dungannon: Context, 1994.

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14

A, Bailey John, ed. Biology and molecular biology of plant-pathogen interactions. Berlin: Springer-Verlag, 1986.

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15

John, Staskawicz Brian, Ahlquist Paul, Yoder Olen, and UCLA Colloquium on Molecular Biology of Plant-Pathogen Interactions (1988 : Steamboat Springs, Colo.), eds. Molecular biology of plant-pathogen interactions: Proceedings of a UCLA colloquium held at Steamboat Springs, Colorado, March 26-April 1, 1988. New York: A.R. Liss, 1989.

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16

G, Russell David, ed. Microbes as tools for cell biology. San Diego: Academic Press, 1994.

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17

Organization, International Maritime, ed. Guidelines for the control and management of ships' ballast water to minimize the transfer of harmful aquatic organisms and pathogens: Resolution A.868(20). London: International Maritime Organization, 1998.

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18

Ellner. Pathogenic Micro Organisms. Elsevier Science Ltd, 1989.

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19

Dalton, John P., and Mark W. Robinson. Cysteine Proteases of Pathogenic Organisms. Springer, 2011.

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20

Dalton, John P., and Mark W. Robinson. Cysteine Proteases of Pathogenic Organisms. Springer, 2016.

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21

Park, William Hallock, and Anna Wessels Williams. Pathogenic Micro-Organisms: Including Bacteria and Protozoa. Arkose Press, 2015.

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22

Adelberg, Edward A., Ernest Jawetz, and Joseph L. Melnick. Review of Medical Microbiology (Concise Medical Library for Practitioner and Student). Appleton & Lange, 1986.

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23

Jones, P., and C. J. Thorns. COST Action 97: Pathogenic Micro-organisms in Poultry and Eggs. European Communities / Union (EUR-OP/OOPEC/OPOCE), 1997.

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24

COST Action 97: Pathogenic Micro-organisms in Poultry and Eggs. European Communities / Union (EUR-OP/OOPEC/OPOCE), 1998.

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25

Franchini, A., and R.W.A.W. Mulder. COST Action 97: Pathogenic Micro-organisms in Poultry and Eggs. European Communities / Union (EUR-OP/OOPEC/OPOCE), 1998.

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26

Berman, Jules J. Taxonomic Guide to Infectious Diseases: Understanding the Biologic Classes of Pathogenic Organisms. Elsevier Science & Technology Books, 2012.

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27

Taxonomic Guide to Infectious Diseases: Understanding the Biologic Classes of Pathogenic Organisms. Elsevier Science & Technology, 2019.

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28

Berman, Jules J. Taxonomic Guide to Infectious Diseases: Understanding the Biologic Classes of Pathogenic Organisms. Elsevier Science & Technology Books, 2019.

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29

Bankina, Biruta, Gunita Bimsteine, and Janis Kaneps. General plant pathology: exercises. Latvia University of Life Sciences and Technologies, 2021. http://dx.doi.org/10.22616/llu9789984483818.

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This illustrated issue provides students with currently comprehensive information about organisms from the kingdoms of Fungi, Chromista, and Protozoa – important groups of plant pathogens. It covers characterisation of the composition and reproduction of fungi, as well as basic principles of their systematics. The most important orders of plant pathogenic fungi are described, and examples of important pathogens and the description of diseases are given.
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30

Park, William Hallock, and Anna Wessels Williams. Pathogenic Micro-Organisms: Including Bacteria and Protozoa; a Practical Manual for Students, Physicians and Health Officers. Arkose Press, 2015.

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31

Park, William Hallock, and Anna Wessels Williams. Pathogenic Micro-organisms Including Bacteria and Protozoa; a Practical Manual for Students, Physicians and Health Officers. Arkose Press, 2015.

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32

Park, William Hallock, and Anna Wessels Williams. Pathogenic Micro-Organisms: Including Bacteria and Protozoa; A Practical Manual for Students, Physicians and Health Officers. Franklin Classics Trade Press, 2018.

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33

Park, William Hallock. Pathogenic Micro-Organisms: Including Bacteria and Protozoa; a Practical Manual for Students, Physicians and Health Officers. Creative Media Partners, LLC, 2022.

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34

Park, William Hallock. Pathogenic Micro-Organisms: Including Bacteria and Protozoa; a Practical Manual for Students, Physicians and Health Officers. Creative Media Partners, LLC, 2022.

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35

Pathogenic Micro-Organisms: Including Bacteria and Protozoa; a Practical Manual for Students, Physicians and Health Officers. Franklin Classics, 2018.

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36

Park, William Hallock, and Anna W. Williams. Pathogenic Micro-Organisms: Including Bacteria and Protozoa; a Practical Manual for Students, Physicians and Health Officers. Arkose Press, 2015.

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37

Park, William Hallock. Pathogenic Micro-Organisms: Including Bacteria and Protozoa; a Practical Manual for Students, Physicians and Health Officers. Creative Media Partners, LLC, 2018.

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38

Smulders, Frans J. M. Elimination of Pathogenic Organisms from Meat and Poultry: Proceedings of the International Symposium : Prevention of Contamination, and Decontamina. Elsevier Science Ltd, 1987.

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39

Sun, Wenli. Various Methods and Novel Techniques: Rapid Molecular Detection of Human, Plant, Genetic, and Microbial Infectious Diseases, Pathogenic Bacteria, and Organisms. Nova Science Publishers, Incorporated, 2022.

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40

Virk, Abinash. Specific Microorganisms. Oxford University Press, 2012. http://dx.doi.org/10.1093/med/9780199755691.003.0410.

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This chapter approaches the field of infectious diseases from 3 perspectives. This first section reviews the characteristics of specific pathogenic organisms (gram-positive cocci, staphylococci, gram-negative bacilli, gram-positive bacilli, gram-negative cocci, anaerobic bacteria, actinomycetes, mycobacteria, spirochetes, fungi, viruses, etc). Symptoms, diagnosis, and treatment of conditions caused by these organisms are discussed.
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41

Meyer, Harriet S. Organisms and Pathogens. Oxford University Press, 2009. http://dx.doi.org/10.1093/jama/9780195176339.021.236.

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42

Johnson, Elizabeth M. Hyaline moulds. Edited by Christopher C. Kibbler, Richard Barton, Neil A. R. Gow, Susan Howell, Donna M. MacCallum, and Rohini J. Manuel. Oxford University Press, 2017. http://dx.doi.org/10.1093/med/9780198755388.003.0017.

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Hyaline moulds are fungi that grow predominantly in a filamentous form with colourless hyphae. This is not a taxonomic grouping and encompasses many thousands of different fungal genera. However, there is a small subset of environmental saprobes or plant pathogenic moulds, currently comprising at least 75 species from 30 different genera, that are opportunistic human pathogens and have been implicated in invasive infections referred to as hyalohyphomycosis. In addition they may cause less invasive cutaneous, subcutaneous, mucous membrane, and corneal infections. This group of organisms includes Fusarium, Sarocladium, Paecilomyces, Purpureocillium, Scedosporium, Rasamsonia, and Scopulariopsis spp., and it is these that form the focus of this chapter. Aspects of taxonomy, cell biology, pathogenesis, epidemiology, incidence, risk factors, presentation, diagnosis, and treatment are discussed with particular reference to those features that are specific to hyaline moulds.
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43

Friedman, Herman, Toby K. Eisenstein, and Paul Actor. Host Defenses to Intracellular Pathogens: Proceedings of a conference held in Philadelphia, Pennsylvania, June 10-12, 1981. Springer, 2012.

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44

Friedman, Herman, Toby K. Eisenstein, and Paul Actor. Host Defenses to Intracellular Pathogens: Proceedings of a Conference Held in Philadelphia, Pennsylvania, June 10-12 1981. Springer London, Limited, 2012.

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45

Voll, Reinhard E., and Barbara M. Bröker. Innate vs acquired immunity. Oxford University Press, 2013. http://dx.doi.org/10.1093/med/9780199642489.003.0048.

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The innate and the adaptive immune system efficiently cooperate to protect us from infections. The ancient innate immune system, dating back to the first multicellular organisms, utilizes phagocytic cells, soluble antimicrobial peptides, and the complement system for an immediate line of defence against pathogens. Using a limited number of germline-encoded pattern recognition receptors including the Toll-like, RIG-1-like, and NOD-like receptors, the innate immune system recognizes so-called pathogen-associated molecular patterns (PAMPs). PAMPs are specific for groups of related microorganisms and represent highly conserved, mostly non-protein molecules essential for the pathogens' life cycles. Hence, escape mutants strongly reduce the pathogen's fitness. An important task of the innate immune system is to distinguish between harmless antigens and potentially dangerous pathogens. Ideally, innate immune cells should activate the adaptive immune cells only in the case of invading pathogens. The evolutionarily rather new adaptive immune system, which can be found in jawed fish and higher vertebrates, needs several days to mount an efficient response upon its first encounter with a certain pathogen. As soon as antigen-specific lymphocyte clones have been expanded, they powerfully fight the pathogen. Importantly, memory lymphocytes can often protect us from reinfections. During the development of T and B lymphocytes, many millions of different receptors are generated by somatic recombination and hypermutation of gene segments making up the antigen receptors. This process carries the inherent risk of autoimmunity, causing most inflammatory rheumatic diseases. In contrast, inadequate activation of the innate immune system, especially activation of the inflammasomes, may cause autoinflammatory syndromes.
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46

Govan, John, and Andrew Jones. Microbiology of CF lung disease. Oxford University Press, 2015. http://dx.doi.org/10.1093/med/9780198702948.003.0003.

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This chapter presents the microbiology of CF and describes the classical bacterial pathogens including Staphylococcus aureus, Haemophilus influenza, Pseudomonas aeruginosa and organisms of the Burkholderia cepacia complex. The dominant of these is P. aeruginosa. Infections with other opportunistic pathogens including non-tuberculous mycobacteria, Stenotrophomonas maltophila, and Achromobacter (Alcaligenes) xylosoxidans are also encountered. This chapter details measures to prevent the onset of chronic infection with these organisms include regular screening of respiratory tract samples for bacterial pathogens and the use of aggressive antibiotic therapy to eradicate initial infection before the pathogen can adapt to the environment of the CF lung. Patient-to-patient spread of transmissible strains of bacterial pathogens has led to the implementation of strict infection control measures at CF centres, including patient segregation. In addition to bacterial pathogens, the contribution of fungal infection in CF lung disease is increasingly recognized.
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47

Money, Nicholas P. 5. Microbiology of human health and disease. Oxford University Press, 2014. http://dx.doi.org/10.1093/actrade/9780199681686.003.0005.

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Microbiological research has been dominated by studies on pathogenic organisms since the work of Louis Pasteur in the 19th century. Recent research suggests that populations of microbes that live in our digestive, reproductive, and respiratory tracts are as important to our wellbeing as the avoidance and treatment of infection. The average human comprises 40 trillion eukaryotic cells and an accompanying microbiome of 100 trillion bacteria, mostly in the gut, and one quadrillion viruses. In addition to bacteria and viruses, the microbiome contains archaea, plus fungi and other eukaryotic microorganisms. The majority of these microbes are beneficial and only a minority have the potential to cause disease.
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48

Greaves, Ian, and Paul Hunt. Biological Incidents. Oxford University Press, 2017. http://dx.doi.org/10.1093/med/9780199238088.003.0009.

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Chapter 9 covers information on recognition of a biological incident, natural disease outbreaks, accidental release of pathogenic organisms, bioterrorism incidents, features of an intentional biological agent release, recognition of an intentional biological agent release, bioterrorism surveillance, and biological agent biodromes, initial management of a suspected biological agent release incident, general incident management principles, universal (standard) precautions, personal protective equipment, decontamination at scene, biological agent transmissibility and public health impact, mathematical models of infection spread, pre- and post-exposure prophylaxis, the hospital response to a biological incident, primary care, cardinal signs and tips for key biological agents, the role of hospital clinicians, and the unidentified biological agent and ‘white powder’ incidents.
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49

Ramachandran, Raja, and Vivekanand Jha. Nematode infections. Edited by Vivekanand Jha. Oxford University Press, 2018. http://dx.doi.org/10.1093/med/9780199592548.003.0195_update_001.

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In addition to the conditions discussed in other chapters in this section, renal involvement has been described in patients with other infections. These infections are usually encountered in the developing countries, especially of the tropical zone. The tropical environment is conducive to growth of a variety of life forms including infection-causing microorganisms and vectors responsible for disease transmission. Some renal pathology is related to immune responses to the organisms, and false-positive results in some tests of immunity/ autoimmunity may also be seen.Varieties include lymphatic filariasis, subcutaneous filariasis (including onchocerciasis), and serous filariasis. Lymphatic filariasis can cause milky urine with high levels of (non-glomerular) proteinuria. Four of the 8 nematode pathogenic species have been associated with glomerular disease.
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50

Pseudomonas: Model Organism, Pathogen, Cell Factory. Wiley-VCH, 2008.

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