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Dissertations / Theses on the topic 'Pathotype'

Author: Grafiati

Published: 4 June 2021

Last updated: 26 July 2025

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1

Wileman, Thomas Mathew. "Novel molecular markers of disease-association among strains of Streptococcus suis : a genomic approach." Thesis, University of Cambridge, 2019. https://www.repository.cam.ac.uk/handle/1810/285962.

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This thesis focuses on the use of a genomic approach to identify novel molecular markers to differentiate Streptococcus suis (S. suis) isolates into two populations, i) disease-associated and ii) non-disease associated. S. suis is a Gram-positive coccus that is considered one of the most important zoonotic bacterial pathogens of swine responsible for significant economic losses to swine production worldwide. Importantly, S. suis is not only an invasive pathogen but also a very successful coloniser of mucosal surfaces; often endemic in swine populations sampled. The widescale use of antibiotics

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2

Saunier, Monique. "Contribution à l'étude sérologique et taxonomique de certains pathovars de p. Syringae." Angers, 1992. http://www.theses.fr/1992ANGE0010.

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L'ensemble des travaux rapportés concernent essentiellement les pseudomonas phytopathogènes, au travers des espèces p. Cichorii, p. Viridiflava, et p. Syringae, plus spécialement les pathovars aptata, helianthi, lacrymans, morsprunorum persicae, phaseolicola, pisi, porri, savastanoi, syringae, tabaci, et tomato. La notion de profil sérologique obtenu en immunodiffusion y est définie et présentée comme un mode de lecture de la structure des chaines latérales du lipopolysaccharide. Une vingtaine de sérogroupes sont mis en évidence à l'aide d'une batterie de 24 sérums différentiels parmi un ensem

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3

Holah, David S. "The influence of fungicide and pathotype interactions on the epidemiology of eyespot." Thesis, University of Nottingham, 1991. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.321456.

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4

Stoute, Simone Tricia. "Molecular Epidemiology and Pathogenicity of the Very Virulent Infectious Bursal Disease Pathotype in United States Poultry." The Ohio State University, 2012. http://rave.ohiolink.edu/etdc/view?acc_num=osu1343602917.

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5

Mwongera, David Thuranira. "Determining the population structure and avirulence gene repertoire of the rice blast fungus Magnaporthe oryzae in Kenya by comparative genome analysis." Thesis, University of Exeter, 2018. http://hdl.handle.net/10871/33087.

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Rice blast disease is caused by the ascomycete fungus Magnaporthe oryzae and is of economic importance worldwide, due to its wide geographical distribution and the severe yield losses it causes on cultivated rice. Understanding the population structure of M. oryzae is key to sustainable management of blast disease. In this study, a total of 290 M. oryzae isolates were collected from rice growing regions in Kenya including Central Kenya (Mwea irrigation scheme), Western Kenya (Ahero and Maugo irrigation schemes in Ahero and Homa-Bay respectively) and Coastal Kenya (Kwale). Initially, I undertoo

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6

Di, Cicco Maria. "Improving prediction strategies in rheumatoid arthritis : additional predictive ability of synovial pathotype over clinical, laboratory and imaging findings." Thesis, Queen Mary, University of London, 2018. http://qmro.qmul.ac.uk/xmlui/handle/123456789/39746.

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Rheumatoid arthritis (RA) is a chronic inflammatory disease of autoimmune origin affecting approximately 1% of adult population worldwide. The clinical course of RA is highly variable, ranging from self-limiting to severe disease, with considerable individual and socio-economic implications. It is now well acknowledged that early diagnosis and treatment equates to better long-term outcomes. However, despite major therapeutic advances in recent decades, the management of RA remains challenging as a significant proportion of patients presents with active disease despite maximization of therapy.

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7

Cruz, Christian D. "Wheat blast: quantitative pathway analyses for the Triticum pathotype of Magnaporthe oryzae and phenotypic reaction of U.S. wheat cultivars." Diss., Kansas State University, 2013. http://hdl.handle.net/2097/16387.

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Doctor of Philosophy<br>Department of Plant Pathology<br>William W. Bockus<br>James P. Stack<br>Wheat blast, caused by the Triticum pathotype of Magnaporthe oryzae (MoT), is a serious disease of wheat causing yield failures and significant economic losses during epidemic years in Brazil, Paraguay, and Bolivia. Although outbreaks occur only sporadically, wheat blast is considered a major disease affecting wheat production in South America and may be a threat to the wheat crop in the United States. Wheat is a major crop in the U.S. and wheat exports from the U.S. are important to food security o

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8

Lalanne, Marie-Laure. "Evolution de l'identification des Escherichia coli entéropathogènes et entérohémorragiques : du sérotype au pathotype, à propos de 79 isolats en pédiatrie." Bordeaux 2, 2000. http://www.theses.fr/2000BOR2P039.

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9

Shafik, Hussain latif. "Taxonomie des pseudomonas phytopathogènes du groupe de pseudomonas syringae : études phénotypique et génotypique." Angers, 1994. http://www.theses.fr/1994ANGE0012.

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La taxonomie des pseudomonas fluorescents phytopathogènes oxydase négative bien qu'ayant évolué dans le temps est actuellement floue et insatisfaisante. Ce groupe comprend 52 pathovars de p. Syringae et 5 espèces proches (p. Cichorii et p. Viridiflava, p. Amygdali, p. Ficuserectae, p. Meliae). Les caractères phénotypiques (20 caractères biochimiques et l'assimilation de 147 substrats hydrocarbones) de 655 souches des pathovars de p. Syringae et des 5 espèces proches ont été étudiés. Les données ont été interprétées par l'utilisation d'une méthode de taxonomie numérique et du coefficient de cap

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10

Guillorit, Christiane. "Contribution à l'étude antigénique de quatre pathovars de pseudomonas syringae : intérêt sérologique du lipopolysaccharide." Angers, 1986. http://www.theses.fr/1986ANGE0001.

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11

Millar, Austin Walter. "Relationships between pathotypes of bean common mosaic virus." Thesis, Queen's University Belfast, 1991. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.334484.

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12

Whitehead, Debra Sian. "Races and pathotypes of the wilt pathogen Fusarium oxysporum." Thesis, University of East Anglia, 1991. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.293758.

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13

Salame, Y. W. "Biochemical differentiation between pathotypes of Globodera rostochiensis and G. pallida." Thesis, University of Newcastle Upon Tyne, 1985. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.382978.

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14

Nontongana, Nolonwabo. "Antibiogram profiling of Escherichia coli pathotypes isolated from Kat River and Fort Beaufort abstraction water." Thesis, University of Fort Hare, 2014. http://hdl.handle.net/10353/d1019820.

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Escherichia coli (E. coli) is a widespread species that includes a broad variety of strains, ranging from highly pathogenic strains causing worldwide outbreaks of severe disease to virulent isolates which are part of the normal intestinal flora or which are well characterized and safe laboratory strains. The pathogenicity of a given E. coli strain is mainly determined by specific virulence factors which include adhesins, invasins, toxins and capsule. The aim of this study was to evaluate the prevalence and antibiogram profiles of E. coli pathotypes previously isolated from Kat River and Fort B

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15

Spina, Daniela. "Pathogenicity of human and animal Staphylococcus aureus isolates." Doctoral thesis, Università di Catania, 2012. http://hdl.handle.net/10761/1092.

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Staphylococcus aureus is a commensal and pathogenic organism, adapted to survive in many niches and causing, by the production of a large array of virulence factors, a wide variety of human and animal infections such as Atopic Dermatitis (AD), Cystic Fibrosis (CF), and Bovine Mastitis (BM). The aim of our study was to analyze the biofilm-formation capacity and the virulence-gene content of three different S.aureus groups, collected from sputum of Cystic Fibrosis patients (CF clinical group), lesions or skin of patients affected by Atopic Dermatitis (AD clinical group) and from mammary-gland

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16

Ntloko, Phindiwe. "Enterococcus pathotypes as reservoirs of antibiotic resistance determinants in the Kat River and Fort Beaufort abstraction waters." Thesis, University of Fort Hare, 2014. http://hdl.handle.net/10353/d1019821.

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In this study, 400 presumptive Enterococcus isolates previously recovered from Kat River and Fort Beaufort Abstraction water dam were subjected to molecular confirmation and pathotyping. Two hundred and seventy-four (68%) of these isolates were confirmed to be enterococci species. Confirmations studies were polymerase chain reaction (PCR) based, using enterococci specific primers targeting the tuf gene. The confirmed enterococci isolates were further differentiated into their pathotypes, the targets of which were: E. faecalis, E. avium, E. hirae, E. casseliflavarus and E. gallinarum using well

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17

Bahri, Bochra Amina. "Adaptation et structuration spatiale des populations méditerranéennes de rouille jaune du blé (Puccinia striiformis f. Sp. Tritici)." Paris 11, 2008. http://www.theses.fr/2008PA112085.

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En France, la population de rouille jaune du blé P. Striiformis f. Sp. Tritici (PST) est structurée en deux sous-populations : une population Nord qui provoque des épidémies tous les 3-4 ans, évolue rapidement et présente des pathotypes dotés de nombreuses virulences, et une population Sud plus sporadique et dominée par un pathotype simple (6E16-Av9). Malgré la sensibilité des variétés de blé du Sud de la France aux races du Nord et le potentiel migratoire de PST, cette structuration de la population se maintient. Pour expliquer cette structuration, nous avons testé si (i) les pathotypes du No

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18

Titilawo, Osuolale Yinka. "Assessment of the quality indices and prevalence of Escherichia coli pathotypes in selected rivers of Osun state, Southwestern Nigeria." Thesis, University of Fort Hare, 2015. http://hdl.handle.net/10353/d1021274.

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Surface waters are important freshwater sources used for domestic, industrial, agricultural and recreational activities, and the availability of good quality freshwater is indispensable for preventing water-borne diseases and improving quality of life especially in communities that lack pipe-borne water. Water samples were collected from ten rivers at different locations in Osun State, Southwestern Nigeria. A total of 12 physicochemical parameters, counts of total coliforms (TC) and Escherichia coli isolates were determined using standard analytical procedures. Confirmed Escherichia coli isola

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19

Jia, Hongtao. "An evaluation of protocols for stabilizing pathotypes of Phytophthora Sojae isolates and characterizing race-specific resistant genes in soybean plant introductions." The Ohio State University, 2003. http://rave.ohiolink.edu/etdc/view?acc_num=osu1413365001.

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20

Lebeau, Aurore. "Résistance de la tomate, l'aubergine et le piment à Ralstonia solanacearum : interactions entre les géniteurs de résistance et la diversité bactérienne, caractérisation et cartographie des facteurs génétiques impliqués chez l'aubergine." Phd thesis, Université de la Réunion, 2010. http://tel.archives-ouvertes.fr/tel-00752358.

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Ralstonia solanacearum est une bactérie vasculaire d'origine tellurique dévastatrice chez les Solanacées maraîchères. L'une des difficultés pour la sélection variétale réside dans le contournement de la résistance, en raison de la grande variabilité et plasticité génotypique du pathogène. Trente accessions de tomate, aubergine et piment (Core-TEP) testées vis-à-vis de 12 souches représentatives des phylotypes I, II et III de R. solanacearum (Core-Rs2) ont été classées de très sensibles à très résistantes. Des groupes de souches définis en fonction de leur virulence et agressivité ont été nommé

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21

Khetarpal, Ravinder Kumar. "Contribution à l'étude des relations Pea Seed borne Mosaic Virus-pois : effet dépressif, transmision, résistance pour une analyse critique des méthodes de lutte." Paris 11, 1989. http://www.theses.fr/1989PA112279.

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Le Pea Seed borne Mosaic Virus (PSbMV) est un potyvirus du pois transmissible par la graine et par les pucerons. Il a été détecté dans la plupart des zones de culture du pois mais son importance a été quelquefois sous-estimée en raison de l'absence de symptômes caractéristiques au champ. Pour cette raison, il était important d’obtenir quelque information relative à l'effet de ce virus sur le rendement du pois protéagineux. Un autre objectif de ce travail était de mieux connaître la transmission du PSbMV en vue d'une lutte à court terme et étudier les résistances et pathotypes pour des programm

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22

Caine, Lesley-Anne. "Prevalence and antibiotic resistance determinants of Escherichia coli pathotypes obtained from raw milk in two farms from the Eastern Cape, South Africa: public health implications." Thesis, University of Fort Hare, 2013. http://hdl.handle.net/10353/d1015525.

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Milk quality continues to be a topic of intense debate in the dairy industry, medical and public health communities. Production of maximum quantities of high-quality milk is an important goal of every dairy operation. High-quality milk must contain a low number of somatic cells and low bacteria count, and must be free of human pathogens and antibiotic residues. The objective of this study was to determine the prevalence of E. coli in unpasteurized milk recovered from Middledrift and Fort Hare dairy. In this study 400 milk samples were collected from two commercial farms (Middledrift and Fort H

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23

Adefisoye, Martins Ajibade. "Evaluation of the incidence of enteric viruses, Vibrio species and Escherichia coli pathotypes in effluents of two wastewater treatment plants located in Keiskammahoek and Stutterheim in the Eastern Cape Province of South Africa." Thesis, University of Fort Hare, 2016. http://hdl.handle.net/10353/3165.

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South Africa is currently experiencing water shortage crisis, a challenge that has been attributed not only to the scarcity of freshwater, but also to fast degrading water quality. Factors such as rapid urbanisation, population and economic growth, climate change as well as poor operational and maintenance of many of the exisiting water/wastewater treatment facilities have been acknowledged as important contributors to degrading water quality in the country. Untreated or inadequately treated discharged wastewater effluents constitute point source pollution to many freshwater environments in So

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24

Balbi, Bruno Pereira. "Variabilidade fisiológica e molecular de isolados de Pseudocercospora griseola e avaliação de fontes de resistência do feijoeiro à mancha angular." Universidade Federal de Viçosa, 2009. http://locus.ufv.br/handle/123456789/4758.

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Made available in DSpace on 2015-03-26T13:42:23Z (GMT). No. of bitstreams: 1 texto completo.pdf: 1356987 bytes, checksum: 030b61d243d62bcfe2b52e6110cb33b0 (MD5) Previous issue date: 2009-07-31<br>The angular leaf spot, incited by the fungus Pseudocercospora griseola (Sacc.) Crous & U. Braun is one of the major diseases that affect the culture of the bean, can be found in all producing regions, especially when the culture is subjected to condition of mild temperatures in irrigated crops. This condition coupled with the use of susceptible cultivars favors the occurrence of the disease causes l

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25

Kohnen, Paul D. "Partial characterization of the P4 pathotype of pea seedborne mosaic virus." Thesis, 1992. http://hdl.handle.net/1957/36166.

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Biological, serological, and molecular characteristics of the P4 pathotype of pea seedborne mosaic potyvirus (PSbMV) were investigated. The characterization allowed P4 to be differentiated from other pathotypes of the same virus. P4 was distinguished from P1 on the basis of host symptomatology. It induced varied, but often distinctive symptoms in systemically-infected pea (Pisum sativum) cultivars. P4 inoculation of indicator hosts, notably Chenopodium album, resulted in the formation of local lesions. Pathotype P4 was seed transmitted at low frequencies relative to P1. In ten selected pea cul

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26

Keller, Karen E. "Interactions between pea seed-borne mosaic virus pathotype 1 and Pisum sativum resistance gene sbm-1." Thesis, 1995. http://hdl.handle.net/1957/34654.

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27

Funk, Cornelius Joel. "Protoplast development and histopathology of Entomophaga grylli (Fresenius) Batko pathotype 2 infections in Melanoplus differentialis (Thomas)." 1987. http://hdl.handle.net/2097/22473.

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28

Tillotson, Dwight Keith. "Abiotic and pathogen factors of Entomophaga grylli (Fresenius) Batko pathotype 2 infections in Melanoplus differentialis (Thomas)." 1988. http://hdl.handle.net/2097/22477.

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29

Rieckmann, Karoline Luise Maria. "Characterization of neglected Streptococcus suis pathotypes: molecular epidemiology and IdeSsuis-based vaccination approaches." 2020. https://ul.qucosa.de/id/qucosa%3A72871.

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Einleitung Streptococcus (S.) suis verursacht bei Schweinen unter anderem Meningitis, Arthritis, Serositis und Endokarditis und ist eine der größten Herausforderungen für die Schweineindustrie. Von 29 beschriebenen Serotypen sind die Serotypen 2, 7 und 9 unter invasiven Isolaten weltweit besonders prävalent, vor allem in Europa. Bis heute gibt es keinen zugelassenen Impfstoff zur Prävention von S. suis-Erkrankungen in Europa, daher ist im Feld die Anwendung stallspezifischer Impfstoffe verbreitet. Diese bieten jedoch höchstens homologen Schutz und ihre Wirkung kann durch prädisponierende Fakto

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30

Johnson, Marcy. "Genotypic analysis of Rhynchosporium secalis pathotypes." 1996. http://hdl.handle.net/1993/19239.

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31

Shang, Hongzhong. "The variation in virulence phenotypes and morphological traits between pathotypes of Aphanomyces euteiches." 1999. http://catalog.hathitrust.org/api/volumes/oclc/45317702.html.

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32

Hasan, Muhammad Jakir. "Screening of Brassica germplasm for resistance to Plasmodiophora brassicae pathotypes prevalent in Alberta, Canada." Master's thesis, 2010. http://hdl.handle.net/10048/901.

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Thesis (M.Sc.)--University of Alberta, 2010.<br>Title from PDF file main screen (viewed on May 3, 2010). A thesis submitted to the Faculty of Graduate Studies and Research in partial fulfillment of the requirements for the degree of Master of Science in Plant Science, Department of Agricultural, Food and Nutritional Science, University of Alberta. Includes bibliographical references.

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33

Hamelin, Katia. "Caractérisation des pathotypes d'Escherichia coli dans les eaux des Grands Lacs à l'aide d'une biopuce d'ADN." Thèse, 2006. http://hdl.handle.net/1866/15157.

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34

Su, Yu-Chi, and 蘇鈺琪. "Genotypic and Pathotypic Diversity of Xanthomonas oryzae pv. oryzicola Strains in Taiwan." Thesis, 2019. http://ndltd.ncl.edu.tw/cgi-bin/gs32/gsweb.cgi/login?o=dnclcdr&s=id=%22107NCHU5363014%22.&searchmode=basic.

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碩士<br>國立中興大學<br>植物病理學系所<br>107<br>Bacterial leaf streak (BLS) disease of rice, elicited by Xanthomonas oryzae pv. oryzicola (Xoc), was originally discovered in the Philippines in 1918 and recently found in Taiwan (Nantou and Yulin counties) in 2007. To understand the diversity of the BLS pathogens in Taiwan, 48 Xoc strains isolated at different time and locations were differentiated by their pathological reactions on 18 rice varieties, i.e. IR24, 12 IR24-derived IRBB lines, and 5 Taiwan commercial lines, and by PCR-amplified DNA fingerprints that primed to repetitive sequences. The genotypes o

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35

Yella, Goud T. "“Epidemiology, virulence and molecular diversity in blast [Magnaporthe grisea (Hebert) Barr.] of pearl millet [Pennisetum glaucum (L.) R. Br.] and resistance in the host to diverse pathotypes”." Thesis, 2015. http://oar.icrisat.org/9726/1/T.%20Y.%20Goud%20thesis.pdf.

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Blast has emerged as an important disease in the major pearl millet growing areas in India. The present investigation was undertaken to study cultural, pathogenic and molecular diversity in the M. grisea isolates infecting pearl millet, effect of temperature and leaf wetness duration on blast development and to screen pearl millet lines for resistance to blast disease. Culture characters of four monoconidial isolates of M. grisea MgPM 45, MgPM 53, MgPM 56 and MgPM 118 were tested on OMA and PDA medium at different pH ranging from pH 5.5 to pH 8.0 (pH 5.5, pH 6.0, pH 6.5, pH 7.0, pH 7.5 and pH

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36

Yella, Goud T. "“Epidemiology, virulence and molecular diversity in blast [Magnaporthe grisea (Hebert) Barr.] of pearl millet [Pennisetum glaucum (L.) R. Br.] and resistance in the host to diverse pathotypes”." Thesis, 2016. http://oar.icrisat.org/10093/1/T.%20Y.%20Goud%20thesis.pdf.

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Blast has emerged as an important disease in the major pearl millet growing areas in India. The present investigation was undertaken to study cultural, pathogenic and molecular diversity in the M. grisea isolates infecting pearl millet, effect of temperature and leaf wetness duration on blast development and to screen pearl millet lines for resistance to blast disease. Culture characters of four monoconidial isolates of M. grisea MgPM 45, MgPM 53, MgPM 56 and MgPM 118 were tested on OMA and PDA medium at different pH ranging from pH 5.5 to pH 8.0 (pH 5.5, pH 6.0, pH 6.5, pH 7.0, pH 7.5 and pH

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37

Sicard, Jean-Félix. "Étude de l’effet des sucres dérivés du mucus et du régulateur NagC sur la formation de biofilm d’E. coli de différents pathotypes incluant les E. coli adhérentes et invasives (AIEC)." Thèse, 2017. http://hdl.handle.net/1866/21068.

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38

Freitag, Thurid. "Uropathogenic Escherichia coli of dogs and cats : pathotypic traits and susceptibility to bacteriophages : a thesis presented in partial fulfilment of the requirements for the degree of Doctor of Philosophy in Veterinary Clinical Sciences at Massey University, Turitea, Palmerston North, Aotearoa, New Zealand." 2006. http://hdl.handle.net/10179/1541.

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The purpose of this study was to investigate the feasibility of using bacteriophages - viruses that can lyse bacteria - to control infections caused by uropathogenic Escherichia coli (UPEC) in dogs and cats. Prior to phage experiments, UPEC were subjected to virulence factor genotyping by multiplex polymerase chain reaction assay and phylogenetic 'fingerprinting' by Pulsed-Field Gel Electrophoresis (PFGE). Twenty-five of 30 assessed virulence factor gene (VFG) markers were detected at least once in 31 UPEC isolated from 20 UK cats and 89 UPEC isolated from dogs (56), cats (22) and people (11)

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