Relevant bibliographies by topics / Phylogeography

Contents

  1. Journal articles
  2. Dissertations / Theses
  3. Books
  4. Book chapters
  5. Conference papers
  6. Reports

Academic literature on the topic 'Phylogeography'

Author: Grafiati
Published: 4 June 2021
Last updated: 17 July 2025

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Journal articles on the topic "Phylogeography"

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Domínguez-Domínguez, D., and E. Vázquez– Domínguez. "Filogeografía: aplicaciones en taxonomía y conservación." Animal Biodiversity and Conservation 32, no. 1 (2009): 59–70. http://dx.doi.org/10.32800/abc.2009.32.0059.

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Phylogeography: applications in taxonomy and conservation. Phylogeography is defined as the discipline that studies the principles and processes that determine the geographical distribution of genealogical lineages. Two of the study areas where phylogeographic approaches are used more and more frequently are taxonomy and conservation. In this review we first present a general description of phylogeography and then discuss how research in taxonomy and conservation has been addressed when using phylogeographic approaches, emphasising in particular the limitations that need to be considered. We i
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Zamudio, Kelly R., Rayna C. Bell, and Nicholas A. Mason. "Phenotypes in phylogeography: Species’ traits, environmental variation, and vertebrate diversification." Proceedings of the National Academy of Sciences 113, no. 29 (2016): 8041–48. http://dx.doi.org/10.1073/pnas.1602237113.

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Almost 30 y ago, the field of intraspecific phylogeography laid the foundation for spatially explicit and genealogically informed studies of population divergence. With new methods and markers, the focus in phylogeography shifted to previously unrecognized geographic genetic variation, thus reducing the attention paid to phenotypic variation in those same diverging lineages. Although phenotypic differences among lineages once provided the main data for studies of evolutionary change, the mechanisms shaping phenotypic differentiation and their integration with intraspecific genetic structure ha
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Temirbayeva, K. "Biogeography and phylogeography." Journal of Geography and Environmental Management 44, no. 1 (2017): 64–67. http://dx.doi.org/10.26577/jgem.2017.1.349.

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Edwards, Scott V., Sally Potter, C. Jonathan Schmitt, Jason G. Bragg, and Craig Moritz. "Reticulation, divergence, and the phylogeography–phylogenetics continuum." Proceedings of the National Academy of Sciences 113, no. 29 (2016): 8025–32. http://dx.doi.org/10.1073/pnas.1601066113.

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Phylogeography, and its extensions into comparative phylogeography, have their roots in the layering of gene trees across geography, a paradigm that was greatly facilitated by the nonrecombining, fast evolution provided by animal mtDNA. As phylogeography moves into the era of next-generation sequencing, the specter of reticulation at several levels—within loci and genomes in the form of recombination and across populations and species in the form of introgression—has raised its head with a prominence even greater than glimpsed during the nuclear gene PCR era. Here we explore the theme of retic
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Papadopoulou, Anna, and L. Lacey Knowles. "Toward a paradigm shift in comparative phylogeography driven by trait-based hypotheses." Proceedings of the National Academy of Sciences 113, no. 29 (2016): 8018–24. http://dx.doi.org/10.1073/pnas.1601069113.

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For three decades, comparative phylogeography has conceptually and methodologically relied on the concordance criterion for providing insights into the historical/biogeographic processes driving population genetic structure and divergence. Here we discuss how this emphasis, and the corresponding lack of methods for extracting information about biotic/intrinsic contributions to patterns of genetic variation, may bias our general understanding of the factors driving genetic structure. Specifically, this emphasis has promoted a tendency to attribute discordant phylogeographic patterns to the idio
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Kidd, David M., and Michael G. Ritchie. "Phylogeographic information systems: putting the geography into phylogeography." Journal of Biogeography 33, no. 11 (2006): 1851–65. http://dx.doi.org/10.1111/j.1365-2699.2006.01574.x.

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Lavery, Tyrone H., Lucas H. DeCicco, Karen V. Olson, Piokera S. Holland, and Robert G. Moyle. "Phylogeography of Solomon Islands blossom bats reflects oceanic divides and Pleistocene connections." Journal of Biogeography 50, no. 5 (2023): 920–31. https://doi.org/10.5281/zenodo.14818151.

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(Uploaded by Plazi for the Bat Literature Project) Aim: Periodic lowering of sea levels and formation of land bridges can reshape phylogeographic patterns of insular biotas. Using archipelago-­wide sampling, we aimed to test if phylogeography of an old-­endemic bat lineage reflected Pleistocene land bridges.
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Bowen, Brian W., Michelle R. Gaither, Joseph D. DiBattista, et al. "Comparative phylogeography of the ocean planet." Proceedings of the National Academy of Sciences 113, no. 29 (2016): 7962–69. http://dx.doi.org/10.1073/pnas.1602404113.

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Understanding how geography, oceanography, and climate have ultimately shaped marine biodiversity requires aligning the distributions of genetic diversity across multiple taxa. Here, we examine phylogeographic partitions in the sea against a backdrop of biogeographic provinces defined by taxonomy, endemism, and species composition. The taxonomic identities used to define biogeographic provinces are routinely accompanied by diagnostic genetic differences between sister species, indicating interspecific concordance between biogeography and phylogeography. In cases where individual species are di
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Byrne, M. "Phylogeography provides an evolutionary context for the conservation of a diverse and ancient flora." Australian Journal of Botany 55, no. 3 (2007): 316. http://dx.doi.org/10.1071/bt06072.

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Phylogeography can inform conservation strategies through assessment of genetic diversity that incorporates an evolutionary perspective, and allows evaluation within a geographical context, thus providing integration with other biogeographical information. Comparative phylogeography can identify significant historical processes that have had major influences on the biota and provides a historical context for understanding current species distributions. The phylogeographic patterns in the flora of south-western Australia are reviewed. Concordant patterns of lineage divergence in three unrelated
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Urbaniak, Jacek, and Paweł Kwiatkowski. "Plant Taxonomy, Systematics and Phylogeography." Plants 13, no. 19 (2024): 2670. http://dx.doi.org/10.3390/plants13192670.

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Plant taxonomy and phylogeny deal with very important problems related to the genetic diversity of populations found in different geographical regions, trying to present the variability of these populations but also to explain their origin. For this reason, such studies examining the conditioned diversity of plant populations were the subject of this Special Issue (SI) of the journal Plants. This SI contains ten original articles and one review article concerning phylogeography and related sciences, i.e., biogeography, taxonomy, and systematics, as well as the genetic variability that lies at
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Dissertations / Theses on the topic "Phylogeography"

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Montano-Rendon, Mauricio. "Phylogeography of littorinid snails." Thesis, University of Sheffield, 2016. http://etheses.whiterose.ac.uk/13328/.

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Interactions between evolutionary forces such as natural selection, genetic drift and gene flow are complex. Natural selection can lead to parallel formation of phenotypes under similar environmental conditions. Phylogenetic relationships can be inferred from the accumulation of genetic variation caused by genetic drift, regardless of phenotypes. Gene flow between populations can sometimes facilitate the formation of species by natural selection. In this thesis, two groups of marine snails in the diverse subfamily Littorininae were studied. The three rocky-shore species Littorina saxatilis, Li
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Haughey, Michael D. "Phylogeography of the Spring Salamander, Gyrinophilus porphyriticus: Historic and Contemporary River System's Influence on Phylogeographic History." Ohio University / OhioLINK, 2015. http://rave.ohiolink.edu/etdc/view?acc_num=ohiou1422367075.

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Rönkä, N. (Nelli). "Phylogeography and conservation genetics of waders." Doctoral thesis, Oulun yliopisto, 2016. http://urn.fi/urn:isbn:9789526211633.

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Abstract Many waders are in decline, and the number of endangered species and populations is increasing. Their protection and management requires knowledge of both ecological and genetic state of the populations. In this thesis, I studied the distribution-wide genetic variation, structure and phylogeography of the Temminck’s Stint (Calidris temminckii) and Terek Sandpiper (Xenus cinereus) using microsatellites and sequence data from the mitochondrial control region and cytochrome oxidase I gene. I compared these regionally endangered species to other waders with varying evolutionary histories,
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Kvist, L. (Laura). "Phylogeny and phylogeography of European Parids." Doctoral thesis, University of Oulu, 2000. http://urn.fi/urn:isbn:9514255364.

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Abstract Mitochondrial DNA sequences were used to study the phylogeny, population structure and colonisation history of Parus species. The phylogenetic relationships of seven European and three American species were examined by sequencing a part of the cytochrome b gene. Phylogenetically the closest species were the great tit (Parus major) and the blue tit (P. caeruleus). Subgenus Poecile was divided into two clades, one consisting of the Siberian tit (P. cinctus), the Carolina chickadee (P. carolinensis) and the Black-capped chickadee (P. atricapillus) and the other consisting of the marsh
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Kuo, Hao-Chi. "Phylogeography and diversification of Taiwanese bats." Thesis, Queen Mary, University of London, 2012. http://qmro.qmul.ac.uk/xmlui/handle/123456789/8493.

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Gene flow is a central evolutionary force that largely determines the level of differentiation among populations of organisms and thus their potential for divergence from each other. Identifying key factors that influence gene flow among populations or closely related taxa can thus provide valuable insights into how new species arise and are maintained. I undertook a comparative study of the factors that have shaped range-wide intraspecific differentiation in four related and broadly co-distributed Taiwanese bat species of the genera Murina and Kerivoula. Bats were sampled from sites across Ta
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Darrock, David John. "Phylogeography of two lusitanian sea stars." Thesis, Cardiff University, 2010. http://orca.cf.ac.uk/55099/.

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The first comprehensive genetic study of North East Atlantic and Mediterranean sea stars, Asterina gibbosa and Asterina phylactica, is presented here, based on mitochondrial DNA (mtDNA) and Amplified Fragment Length Polymorphism (AFLP) data. MtDNA analysis revealed that the two putative species are distinct however there is incomplete lineage sorting, with the two most common haplotypes being shared across both species. MtDNA revealed low divergence between populations especially among most Atlantic populations, with no significant differentiation between the two basins. Although, both species
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Martinez, Araneda Camila. "Plant phylogeography in southern South America." Thesis, University of Edinburgh, 2011. http://hdl.handle.net/1842/5041.

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This thesis is a phylogeographic investigation into plant species from Patagonia, and aims to infer their past distributions from the study of genealogical lineages. These species have gone through several events such as glacial periods, volcanism and topographical change which are expected to contribute to the divergence of genetic lineages by shaping distributions, isolating populations and therefore changing their genetic structure. So understanding how these processes have affected populations is important to get information on how the biodiversity in the region has been assembled, to iden
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Maddock, S. T. "Systematics and phylogeography of Seychelles amphibians." Thesis, University College London (University of London), 2016. http://discovery.ucl.ac.uk/1476198/.

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This thesis investigates evolutionary patterns of variation in endemic amphibians from the Seychelles archipelago. Focal groups include the treefrog (Tachycnemis seychellensis), and a radiation of caecilians in three genera (Grandisonia, Hypogeophis and Praslinia), and attempts to place these into a phylogenetic context. The introduction (Chapter 1) discusses the importance of islands in the study of evolution and examines patterns of intraspecific variation that have been reported in other Seychelles organisms. Chapter 2 provides the first intraspecific molecular study of the monotypic Seyche
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Last, Mariana P. "Intraspecific Phylogeography of Cycladenia humilis (Apocynaceae)." BYU ScholarsArchive, 2009. https://scholarsarchive.byu.edu/etd/2287.

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Cycladenia humilis (Apocynaceae) is a rare perennial herb native to western North America and has a fragmented distribution in California, Utah, and Arizona. Populations in Utah and Arizona are federally listed as threatened, while there is no conservation status applied to California populations. Using genetic (three chloroplast and two nuclear DNA loci) and morphological characters, intraspecific variation between populations of C. humilis and current taxonomic conventions were assessed. Nested Clade Phylogeographic Analysis and Bayesian phylogenies were used to assess patterns within C. hum
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Sole, Catherine Lynne. "Phylogeography of Scarabaeus (Pachysoma) macleay (Scarabaidae : scarabaeinae)." Pretoria : [s.n.], 2005. http://upetd.up.ac.za/thesis/available/etd-01302006-123900.

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Books on the topic "Phylogeography"

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Hu, Zi-Min, and Ceridwen Fraser, eds. Seaweed Phylogeography. Springer Netherlands, 2016. http://dx.doi.org/10.1007/978-94-017-7534-2.

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Weiss, Steven, and Nuno Ferrand, eds. Phylogeography of Southern European Refugia. Springer Netherlands, 2007. http://dx.doi.org/10.1007/1-4020-4904-8.

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Thorsten, Assmann, and SpringerLink (Online service), eds. Relict Species: Phylogeography and Conservation Biology. Springer-Verlag Berlin Heidelberg, 2010.

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Charles, Lydeard, and Lindberg David R. 1948-, eds. Molecular systematics and phylogeography of mollusks. Smithsonian Books, 2003.

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Ochando, M. D. Phylogeography: It's importance in insect pest control. Nova Science Publisher's, 2011.

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S, Rutgers Damien, ed. Phylogeography: Concepts, intraspecific patterns, and speciation processes. Nova Science Publishers, 2010.

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Helgren, David M., and Robert J. Sager. World Geography Today: Student text. Holt Rinehart & Winston, 2005.

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Apodaca, María José. Andean origin and diversification of the genus Perezia, an ancient lineage of Asteraceae. Smithsonian Institution Scholarly Press, 2015.

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Marshall, H. Dawn. Molecular evolution and phylogeography of common chaffinches (Fringilla coelebs). National Library of Canada = Bibliothèque nationale du Canada, 1997.

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Buehler, Deborah M. Phylogeography and genetic diversity in red knots (Calidris canutus). National Library of Canada, 2003.

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Book chapters on the topic "Phylogeography"

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Hu, Zi-Min, De-Lin Duan, and Juan Lopez-Bautista. "Seaweed Phylogeography from 1994 to 2014: An Overview." In Seaweed Phylogeography. Springer Netherlands, 2016. http://dx.doi.org/10.1007/978-94-017-7534-2_1.

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Guillemin, Marie-Laure, Myriam Valero, Florence Tellier, Erasmo C. Macaya, Christophe Destombe, and Sylvain Faugeron. "Phylogeography of Seaweeds in the South East Pacific: Complex Evolutionary Processes Along a Latitudinal Gradient." In Seaweed Phylogeography. Springer Netherlands, 2016. http://dx.doi.org/10.1007/978-94-017-7534-2_10.

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Neiva, João, Ester A. Serrão, Jorge Assis, et al. "Climate Oscillations, Range Shifts and Phylogeographic Patterns of North Atlantic Fucaceae." In Seaweed Phylogeography. Springer Netherlands, 2016. http://dx.doi.org/10.1007/978-94-017-7534-2_11.

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Li, Jing-Jing, Zi-Min Hu, and De-Lin Duan. "Survival in Glacial Refugia Versus Postglacial Dispersal in the North Atlantic: The Cases of Red Seaweeds." In Seaweed Phylogeography. Springer Netherlands, 2016. http://dx.doi.org/10.1007/978-94-017-7534-2_12.

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Korpelainen, Helena. "Comparative Population Genetics of Red Alga Occupying Different Salinity Conditions." In Seaweed Phylogeography. Springer Netherlands, 2016. http://dx.doi.org/10.1007/978-94-017-7534-2_13.

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Shimada, Satoshi, Kensuke Ichihara, Yuka Masakiyo, Riko Kawaguchi, and Norio Kikuchi. "Phylogeography of Macroalgal Species Distributed in Brackish Water: Ulva prolifera (Ulvophyceae) and Pyropia tenera (Bangiophyceae)." In Seaweed Phylogeography. Springer Netherlands, 2016. http://dx.doi.org/10.1007/978-94-017-7534-2_14.

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Wilson, Laura J., Xénia A. Weber, Tania M. King, and Ceridwen I. Fraser. "DNA Extraction Techniques for Genomic Analyses of Macroalgae." In Seaweed Phylogeography. Springer Netherlands, 2016. http://dx.doi.org/10.1007/978-94-017-7534-2_15.

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Grant, W. Stewart. "Paradigm Shifts in the Phylogeographic Analysis of Seaweeds." In Seaweed Phylogeography. Springer Netherlands, 2016. http://dx.doi.org/10.1007/978-94-017-7534-2_2.

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Straub, Sandra C., Mads Solgaard Thomsen, and Thomas Wernberg. "The Dynamic Biogeography of the Anthropocene: The Speed of Recent Range Shifts in Seaweeds." In Seaweed Phylogeography. Springer Netherlands, 2016. http://dx.doi.org/10.1007/978-94-017-7534-2_3.

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Macaya, Erasmo C., Boris López, Fadia Tala, Florence Tellier, and Martin Thiel. "Float and Raft: Role of Buoyant Seaweeds in the Phylogeography and Genetic Structure of Non-buoyant Associated Flora." In Seaweed Phylogeography. Springer Netherlands, 2016. http://dx.doi.org/10.1007/978-94-017-7534-2_4.

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Conference papers on the topic "Phylogeography"

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Greenan, Taylor. "Phylogeography ofLigiaisopods in South Africa." In 2016 International Congress of Entomology. Entomological Society of America, 2016. http://dx.doi.org/10.1603/ice.2016.115493.

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Ober, Karen Ann. "Phylogeography of trogolobitic beetles in Appalachia." In 2016 International Congress of Entomology. Entomological Society of America, 2016. http://dx.doi.org/10.1603/ice.2016.111609.

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Tseng, Shu-Ping. "Phylogeography of the invasive longhorn crazy ant, Paratrechina longicornis." In 2016 International Congress of Entomology. Entomological Society of America, 2016. http://dx.doi.org/10.1603/ice.2016.94406.

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Bon, Marie-Claude. "Phylogeography of a wheat pest (Cephus cinctus)revisited: Management implications." In 2016 International Congress of Entomology. Entomological Society of America, 2016. http://dx.doi.org/10.1603/ice.2016.110375.

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Rahman, Md Mamunur. "Phylogeography of weaver ant,Oecophylla smaragdina, in Bangladesh (Hymenoptera: Formicidae)." In 2016 International Congress of Entomology. Entomological Society of America, 2016. http://dx.doi.org/10.1603/ice.2016.112381.

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Halbritter, Dale. "Phylogeography ofNeophasiabutterflies (Lepidoptera: Pieridae) at a major North American ecotone." In 2016 International Congress of Entomology. Entomological Society of America, 2016. http://dx.doi.org/10.1603/ice.2016.115052.

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DUDNIKOV, A. "PHYLOGEOGRAPHY OF AEGILOPS TAUSCHII COSS. AS REVEALED BY GOT2 DNA SEQUENCES." In 5TH MOSCOW INTERNATIONAL CONFERENCE "MOLECULAR PHYLOGENETICSAND BIODIVERSITY BIOBANKING". TORUS PRESS, 2018. http://dx.doi.org/10.30826/molphy2018-16.

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Yanahan, Alan D. "Phylogeography ofSynuchus dubius(Coleoptera: Carabidae) in Arizona's Madrean Sky Island Archipelago." In 2016 International Congress of Entomology. Entomological Society of America, 2016. http://dx.doi.org/10.1603/ice.2016.113319.

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Sukhdeo, Christie. "Comparative phylogeography of three widespread dung beetles (Coleoptera: Scarabaeinae) in Cameroon." In 2016 International Congress of Entomology. Entomological Society of America, 2016. http://dx.doi.org/10.1603/ice.2016.115257.

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Koshkarov, Aleksandr, Wanlin Li, My-Linh Luu, and Nadia Tahiri. "Phylogeography: Analysis of genetic and climatic data of SARS-CoV-2." In Python in Science Conference. SciPy, 2022. http://dx.doi.org/10.25080/majora-212e5952-018.

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Reports on the topic "Phylogeography"

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Kohrn, Brendan. An Efficient Pipeline for Assaying Whole-Genome Plastid Variation for Population Genetics and Phylogeography. Portland State University Library, 2000. http://dx.doi.org/10.15760/etd.5891.

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Welch, Brandi. Phylogeography of Two Species of the Genus Apochthonius Chamberlin, 1929, in the Pacific Northwest (Arachnida, Pseudoscorpiones). Portland State University Library, 2000. http://dx.doi.org/10.15760/etd.2728.

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Weitemier, Kevin. Phylogeographic Patterns and Intervarietal Relationships within Lupinus lepidus: Morphological Differences, Genetic Similarities. Portland State University Library, 2000. http://dx.doi.org/10.15760/etd.919.

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Pelletier, Tara. Phylogeographic and Phylogenetic Exploration of Plethodon (Plethodontidae, Caudata) Salamanders in the Pacific Northwest. Portland State University Library, 2000. http://dx.doi.org/10.15760/etd.7462.

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