Academic literature on the topic 'Phytoplankton – Phylogeny'
Create a spot-on reference in APA, MLA, Chicago, Harvard, and other styles
Consult the lists of relevant articles, books, theses, conference reports, and other scholarly sources on the topic 'Phytoplankton – Phylogeny.'
Next to every source in the list of references, there is an 'Add to bibliography' button. Press on it, and we will generate automatically the bibliographic reference to the chosen work in the citation style you need: APA, MLA, Harvard, Chicago, Vancouver, etc.
You can also download the full text of the academic publication as pdf and read online its abstract whenever available in the metadata.
Journal articles on the topic "Phytoplankton – Phylogeny"
1
Sal, Sofía, Laura Alonso-Sáez, Juan Bueno, Francisca C. García, and Ángel López-Urrutia. "Thermal adaptation, phylogeny, and the unimodal size scaling of marine phytoplankton growth." Limnology and Oceanography 60, no. 4 (April 23, 2015): 1212–21. http://dx.doi.org/10.1002/lno.10094.
Full text
2
Kang, Ilnam, Hyun-Myung Oh, Kevin L. Vergin, Stephen J. Giovannoni, and Jang-Cheon Cho. "Genome Sequence of the Marine Alphaproteobacterium HTCC2150, Assigned to the Roseobacter Clade." Journal of Bacteriology 192, no. 23 (October 1, 2010): 6315–16. http://dx.doi.org/10.1128/jb.01088-10.
Full textAbstract:
ABSTRACT Here we announce the genome sequence of a marine bacterium, HTCC2150, that was isolated off the Oregon coast using dilution-to-extinction culturing and that is affiliated with the Roseobacter clade. The 16S rRNA phylogeny showed that the strain was closely related to members of the RCA clade. The genome sequence suggests that strain HTCC2150 is an organoheterotroph carrying diverse metabolic potential, including a close relationship with phytoplankton.
3
Galloway, Aaron W. E., and Monika Winder. "Partitioning the Relative Importance of Phylogeny and Environmental Conditions on Phytoplankton Fatty Acids." PLOS ONE 10, no. 6 (June 15, 2015): e0130053. http://dx.doi.org/10.1371/journal.pone.0130053.
Full text
4
LIU, XUDONG, HUAN ZHU, BENWEN LIU, GUOXIANG LIU, and ZHENGYU HU. "Phylogeny and morphology of genus Nephrocytium (Sphaeropleales, Chlorophyceae, Chlorophyta) from China." Phytotaxa 319, no. 1 (August 29, 2017): 84. http://dx.doi.org/10.11646/phytotaxa.319.1.4.
Full textAbstract:
The genus Nephrocytium Nägeli is a common member of phytoplankton communities that has a distinctive morphology. Its taxonomic position is traditionally considered to be within the family Oocystaceae (Trebouxiophyceae). However, research on its ultrastructure is rare, and the phylogenetic position has not yet been determined. In this study, two strains of Nephrocytium, N. agardhianum Nägeli and N. limneticum (G.M.Smith) G.M.Smith, were identified and successfully cultured in the laboratory. Morphological inspection by light and electron microscopy and molecular phylogenetic analyses were performed to explore the taxonomic position. Ultrastructure implied a likely irregular network of dense and fine ribs on the surface of the daughter cell wall that resembled that of the genus Chromochloris Kol & Chodat (Chromochloridaceae). Phylogenetic analyses revealed that Nephrocytium formed an independent lineage in the order Sphaeropleales (Chlorophyceae) with high support values and a close phylogenetic relationship with Chromochloris. Based on combined morphological, ultrastructural and phylogenetic data, we propose a re-classification of Nephrocytium into Sphaeropleales, sharing a close relationship with Chromochloris.
5
Gianuca, Andros T., Jelena H. Pantel, and Luc De Meester. "Disentangling the effect of body size and phylogenetic distances on zooplankton top-down control of algae." Proceedings of the Royal Society B: Biological Sciences 283, no. 1828 (April 13, 2016): 20160487. http://dx.doi.org/10.1098/rspb.2016.0487.
Full textAbstract:
A negative consequence of biodiversity loss is reduced rates of ecosystem functions. Phylogenetic-based biodiversity indices have been claimed to provide more accurate predictions of ecosystem functioning than species diversity alone. This approach assumes that the most relevant traits for ecosystem functioning present a phylogenetic signal. Yet, traits-mediating niche partitioning and resource uptake efficiency in animals can be labile. To assess the relative power of a key trait (body size) and phylogeny to predict zooplankton top-down control on phytoplankton, we manipulated trait and phylogenetic distances independently in microcosms while holding species richness constant. We found that body size provided strong predictions of top-down control. In contrast, phylogeny was a poor predictor of grazing rates. Size-related grazing efficiency asymmetry was mechanistically more important than niche differences in mediating ecosystem function in our experimental settings. Our study demonstrates a strong link between a single functional trait (i.e. body size) in zooplankton and trophic interactions, and urges for a cautionary use of phylogenetic information and taxonomic diversity as substitutes for trait information to predict and understand ecosystem functions.
6
Endo, H., K. Sugie, T. Yoshimura, and K. Suzuki. "Effects of CO<sub>2</sub> and iron availability on <i>rbcL</i> gene expression in Bering Sea diatoms." Biogeosciences Discussions 11, no. 12 (December 20, 2014): 18105–43. http://dx.doi.org/10.5194/bgd-11-18105-2014.
Full textAbstract:
Abstract. Iron (Fe) can limit phytoplankton productivity in approximately 40% of the global ocean, including high-nutrient, low-chlorophyll (HNLC) waters. However, there is little information available on the impact of CO2-induced seawater acidification on natural phytoplankton assemblages in HNLC regions. We therefore conducted an on-deck experiment manipulating CO2 and Fe using Fe-deficient Bering Sea waters during the summer of 2009. The concentrations of CO2 in the incubation bottles were set at 380 and 600 ppm in the non-Fe-added (control) bottles and 180, 380, 600, and 1000 ppm in the Fe-added bottles. The phytoplankton assemblages were primarily composed of diatoms followed by haptophytes in all incubation bottles as estimated by pigment signatures throughout the 7 day incubation period. At the end of incubation, the relative contributions of diatoms to chlorophyll a biomass decreased significantly with increased CO2 levels in the controls, whereas minimal changes were found in the Fe-added treatments. These results indicate that, under Fe-deficient conditions, the growth of diatoms was negatively affected by the increase in CO2 availability. To confirm this, we estimated the expression and phylogeny of rbcL (which encodes the large subunit of RubisCO) mRNA in diatoms by quantitative reverse transcription PCR and clone library techniques, respectively. Interestingly, regardless of Fe availability, the expression and diversity of rbcL cDNA decreased in the high CO2 treatments (600 and 1000 ppm). The present study suggests that the projected future increase in seawater pCO2 could reduce the RubisCO activity of diatoms, resulting in a decrease in primary productivity and a shift in the food web structure of the Bering Sea.
7
Endo, H., K. Sugie, T. Yoshimura, and K. Suzuki. "Effects of CO<sub>2</sub> and iron availability on <i>rbcL</i> gene expression in Bering Sea diatoms." Biogeosciences 12, no. 7 (April 15, 2015): 2247–59. http://dx.doi.org/10.5194/bg-12-2247-2015.
Full textAbstract:
Abstract. Iron (Fe) can limit phytoplankton productivity in approximately 40% of the global ocean, including in high-nutrient, low-chlorophyll (HNLC) waters. However, there is little information available on the impact of CO2-induced seawater acidification on natural phytoplankton assemblages in HNLC regions. We therefore conducted an on-deck experiment manipulating CO2 and Fe using Fe-deficient Bering Sea water during the summer of 2009. The concentrations of CO2 in the incubation bottles were set at 380 and 600 ppm in the non-Fe-added (control) bottles and 180, 380, 600, and 1000 ppm in the Fe-added bottles. The phytoplankton assemblages were primarily composed of diatoms followed by haptophytes in all incubation bottles as estimated by pigment signatures throughout the 5-day (control) or 6-day (Fe-added treatment) incubation period. At the end of incubation, the relative contribution of diatoms to chlorophyll a biomass was significantly higher in the 380 ppm CO2 treatment than in the 600 ppm treatment in the controls, whereas minimal changes were found in the Fe-added treatments. These results indicate that, under Fe-deficient conditions, the growth of diatoms could be negatively affected by the increase in CO2 availability. To further support this finding, we estimated the expression and phylogeny of rbcL (which encodes the large subunit of RuBisCO) mRNA in diatoms by quantitative reverse transcription polymerase chain reaction (PCR) and clone library techniques, respectively. Interestingly, regardless of Fe availability, the transcript abundance of rbcL decreased in the high CO2 treatments (600 and 1000 ppm). The present study suggests that the projected future increase in seawater pCO2 could reduce the RuBisCO transcription of diatoms, resulting in a decrease in primary productivity and a shift in the food web structure of the Bering Sea.
8
Kim, Hyun Jung, Zhun Li, Nam Seon Kang, Haifeng Gu, Daekyung Kim, Min Ho Seo, Sang Deuk Lee, Suk Min Yun, Seok-Jin Oh, and Hyeon Ho Shin. "Morphology and Phylogeny of Scrippsiella precaria Montresor & Zingone (Thoracosphaerales, Dinophyceae) from Korean Coastal Waters." Journal of Marine Science and Engineering 9, no. 2 (February 3, 2021): 154. http://dx.doi.org/10.3390/jmse9020154.
Full textAbstract:
The dinoflagellate genus Scrippsiella is a common member of phytoplankton and their cysts are also frequently reported in coastal sediments worldwide. However, the diversity of Scrippsiella in Korean waters has not been fully investigated. Here, several isolates of Scrippsiella precaria collected from Korean waters and germinated from resting cysts were examined using light and scanning electron microscopy. The resting cysts were characterized by pointed calcareous spines and one or two red accumulation bodies, and the archeopyle was mesoepicystal, representing the loss of 2–4′ and 1–3a paraplates. Rounded resting cysts were found in culture, and an increase in spine length was observed until 8 days of development. Korean isolates of S. precaria had the plate formula of Po, X, 4′, 3a, 7″, 6C, 4S, 5‴, 2⁗. There were differences in the cell size and location of the red body between Korean isolates and previously described cells of S. precaria. In addition, the Korean isolates of S. precaria had two types of the 5″ plate that either contacted the 2a plate or not. Molecular phylogeny based on internal transcribed spacer (ITS) and large subunit (LSU) rDNA sequences revealed that the Korean isolates were nested within the subclade of PRE (S. precaria and related species) in the clade of Scrippsiella sensu lato, and that the PRE subclade had two ribotypes: ribotype 1 consisting of the isolates from Korea, China, and Australia, and ribotype 2 consisting of the isolates from Italy and Greece. Lineages between isolates of ribotype 1 were likely to be related to the dispersal by ocean currents and ballast waters from international shipping, and the two types of spine shapes and locations of the 5″ plates may be a distinct feature for ribotype 1.
9
Gómez, Fernando, Luis F. Artigas, and Rebecca J. Gast. "Phylogeny and Synonymy of Gyrodinium heterostriatum comb. nov. (Dinophyceae), a Common Unarmored Dinoflagellate in the World Oceans [plus supplementary materials]." Acta Protozoologica 59, no. 2 (2020): 77–87. http://dx.doi.org/10.4467/16890027ap.20.007.12675.
Full textAbstract:
The North Sea and the English Channel are regions with a long tradition of plankton studies, where the colony-forming haptophyte Phaeocystis globosa dominates the spring phytoplankton blooms. Among its predators, we investigated an abundant unarmored dinoflagellate (~3000 cells per liter) in the North Sea in May 2019. It has been reported in the literature as Gymnodinium heterostriatum or G. striatissimum, and often identified as Gyrodinium spirale. Phylogenetic analyses using the small-, large subunit- and Internal Transcriber Spacers of the ribosomal RNA (SSU-, LSU-, ITS rRNA) gene sequences indicate that our isolates clustered within the Gyrodinium clade. The new sequences formed a sister group with sequences of the freshwater taxon Gyrodinium helveticum, being one of the infrequent marine-freshwater transitions in the microbial world. This isolate is the first characterized member of a clade of numerous environmental sequences widely distributed from cold to tropical seas. This common and abundant taxon has received several names due to its morphological plasticity (changes of size and shape, often deformed after engulfing prey) and the difficulty in discerning surface striation. We conclude that the priority is for the species name Gymnodinium heterostriatum Kofoid & Swezy 1921, a new name that was proposed for Gymnodinium spirale var. obtusum sensu Dogiel 1906. The species Gyrodinium striatissimum (Hulburt 1957) Gert Hansen & Moestrup 2000 and Gymnodinium lucidum D. Ballantine in Parke & Dixon 1964 (=G. hyalinum M. Lebour 1925) are posterior synonyms. We propose Gyrodinium heterostriatum comb. nov. for Gymnodinium heterostriatum.
10
Gómez, Fernando, Luis F. Artigas, and Rebecca J. Gast. "Phylogeny and Synonymy of Gyrodinium heterostriatum comb. nov. (Dinophyceae), a Common Unarmored Dinoflagellate in the World Oceans [plus supplementary materials]." Acta Protozoologica 59, no. 2 (2020): 77–87. http://dx.doi.org/10.4467/16890027ap.20.007.12675.
Full textAbstract:
The North Sea and the English Channel are regions with a long tradition of plankton studies, where the colony-forming haptophyte Phaeocystis globosa dominates the spring phytoplankton blooms. Among its predators, we investigated an abundant unarmored dinoflagellate (~3000 cells per liter) in the North Sea in May 2019. It has been reported in the literature as Gymnodinium heterostriatum or G. striatissimum, and often identified as Gyrodinium spirale. Phylogenetic analyses using the small-, large subunit- and Internal Transcriber Spacers of the ribosomal RNA (SSU-, LSU-, ITS rRNA) gene sequences indicate that our isolates clustered within the Gyrodinium clade. The new sequences formed a sister group with sequences of the freshwater taxon Gyrodinium helveticum, being one of the infrequent marine-freshwater transitions in the microbial world. This isolate is the first characterized member of a clade of numerous environmental sequences widely distributed from cold to tropical seas. This common and abundant taxon has received several names due to its morphological plasticity (changes of size and shape, often deformed after engulfing prey) and the difficulty in discerning surface striation. We conclude that the priority is for the species name Gymnodinium heterostriatum Kofoid & Swezy 1921, a new name that was proposed for Gymnodinium spirale var. obtusum sensu Dogiel 1906. The species Gyrodinium striatissimum (Hulburt 1957) Gert Hansen & Moestrup 2000 and Gymnodinium lucidum D. Ballantine in Parke & Dixon 1964 (=G. hyalinum M. Lebour 1925) are posterior synonyms. We propose Gyrodinium heterostriatum comb. nov. for Gymnodinium heterostriatum.
Dissertations / Theses on the topic "Phytoplankton – Phylogeny"
1
Payne, Chris 1971. "Phylogenetic trends in phytoplankton resistance to Cd and Cu toxicity." Thesis, McGill University, 1996. http://digitool.Library.McGill.CA:80/R/?func=dbin-jump-full&object_id=24033.
Full textAbstract:
Some species of marine phytoplankton are believed to be more tolerant of high concentrations of trace metals than others, but no conclusive test of this hypothesis has been conducted. Eleven species of phytoplankton representing 5 classes were grown in Aquil medium containing Cd$ sp{2+}$ concentrations between 10$ sp{-9.85}$ and 10$ sp{-6.84}$ M. Growth rates and intracellular concentrations of Cd, C, N and S were measured. Cadmium quotas (mol Cd/litre-cell volume) were lower in members of Bacillariophyceae than in Chlorophyceae, Prymnesiophyceae, Dinophyceae and Cyanophyceae (ANOVA, p $<$ 0.001). Cellular C:S molar ratios decreased in phytoplankton grown at high (pCd 7.37-6.84) compared to low Cd (no added Cd), as S/litre-cell volume increased. Similar results were observed for C:N molar ratios. In two species that were examined, C:S ratios decreased as a linear function of increasing Cd concentration. Mean Cd$ sp{2+}$ concentration that reduced growth rate to 50% of maximum (pCd$ sp{50})$ was not significantly different among phytoplankton classes (ANOVA, p $<$ 0.05). When these experimental data were combined with pCd$ sp{50}$s calculated from published sources, Chlorophyceae were found to be the most resistant class (ANOVA, p $<$ 0.01). Cadmium and Cu resistance (pCd$ sp{50}$ and pCu$ sp{50})$ were correlated (r = 0.52, p $<$ 0.05), suggesting co-tolerance of phytoplankton to toxic levels of these metals. Chlorophyceae were most tolerant and Cyanophyceae the least tolerant of Cu (ANOVA, p $<$ 0.01). No significant differences were observed among Bacillariophyceae, Prymnesiophyceae, and Dinophyceae, which were of intermediate sensitivity to both metals. The results confirm the existence of a phylogenetic dependence of resistance to trace metal toxicity in phytoplankton.
Books on the topic "Phytoplankton – Phylogeny"
1
Rocap, Gabrielle. Genetic diversity and ecotypic differentiation in the marine cyanobacteria Prochlorococcus and Synechococcus. Cambridge, Mass: Massachusetts Institute of Technology, 2000.
Find full textBook chapters on the topic "Phytoplankton – Phylogeny"
1
Weinbauer, Markus G., and Xavier Mari. "Effects of Ocean Acidification on the Diversity and Activity of Heterotrophic Marine Microorganisms." In Ocean Acidification. Oxford University Press, 2011. http://dx.doi.org/10.1093/oso/9780199591091.003.0010.
Full textAbstract:
Microbe-mediated processes are crucial for biogeochemical cycles and the functioning of marine ecosystems (Azam and Malfatti 2007 ). If these processes are affected by ocean acidification, major consequences can be expected for the functioning of the global ocean and the systems that it influences, such as the atmosphere. In contrast to phytoplankton, which have been relatively well studied (see Chapter 6), there is comparatively little information on the effect of ocean acidification on heterotrophic microorganisms. Two reviews on the potential effects of ocean acidification on microbial plankton have recently been published (Liu et al. 2010 ; Joint et al. 2011) . In a recent perspective paper, Joint et al. (2011) concluded that marine microbes possess the flexibility to accommodate pH change and that major changes in marine biogeochemical processes that are driven by microorganisms are unlikely. Narrative reviews, which look at some of the relevant literature, are potentially biased and could lead to misleading conclusions (Gates 2002). Metaanalysis was developed to overcome most biases of narrative reviews. It statistically combines the results (effect size) of several studies that address a shared research hypothesis. Liu et al. (2010) used a metaanalytic approach to comprehensively review the current understanding of the effect of ocean acidification on microbes (including phytoplankton) and microbial processes, and to highlight the gaps that need to be addressed in future research. In the following, a brief digest on oceanic microbes and their role is provided for readers unfamiliar with this topic. Then the research that has been performed to assess the effects of ocean acidification on the diversity and activity of heterotrophic marine microorganisms is reviewed. Finally, scenarios are developed and potential implications are discussed. Microorganisms are defined as organisms that are microscopic, i.e. too small to be seen by the naked human eye, and mostly comprise single-celled organisms. Viruses are sometimes also included in this definition but it is hotly debated whether viruses are alive or not (Raoult and Forterre 2008). The current phylogeny considers three domains of cellular life, the Bacteria, the Archaea and the Eukarya.