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1

Hodgson, G. "Abundance and distribution of planktonic coral larvae in Kaneohe Bay, Oahu, Hawaii." Marine Ecology Progress Series 26 (1985): 61–71. http://dx.doi.org/10.3354/meps026061.

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2

Taguchi, Satoru, and Edward A. Laws. "Patterns and causes of temporal variability in the physiological condition of the phytoplankton community in Kaneohe Bay, Hawaii." Journal of Plankton Research 9, no. 6 (1987): 1143–57. http://dx.doi.org/10.1093/plankt/9.6.1143.

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3

Hunter, Cynthia L., Mark D. Stephenson, Ronald S. Tjeerdema, et al. "Contaminants in oysters in Kaneohe Bay, Hawaii." Marine Pollution Bulletin 30, no. 10 (1995): 646–54. http://dx.doi.org/10.1016/0025-326x(95)00039-p.

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4

Tanaka, Katsumasa, and Fred T. Mackenzie. "Ecosystem behavior of southern Kaneohe Bay, Hawaii: A statistical and modelling approach." Ecological Modelling 188, no. 2-4 (2005): 296–326. http://dx.doi.org/10.1016/j.ecolmodel.2005.02.018.

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5

Cheroske, Alexander G., Susan L. Williams, and Robert C. Carpenter. "Effects of physical and biological disturbances on algal turfs in Kaneohe Bay, Hawaii." Journal of Experimental Marine Biology and Ecology 248, no. 1 (2000): 1–34. http://dx.doi.org/10.1016/s0022-0981(00)00153-2.

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6

Jokiel, P. L., C. L. Hunter, S. Taguchi, and L. Watarai. "Ecological impact of a fresh-water ?reef kill? in Kaneohe Bay, Oahu, Hawaii." Coral Reefs 12, no. 3-4 (1993): 177–84. http://dx.doi.org/10.1007/bf00334477.

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7

Lowe, Ryan J., James L. Falter, Stephen G. Monismith, and Marlin J. Atkinson. "Wave-Driven Circulation of a Coastal Reef–Lagoon System." Journal of Physical Oceanography 39, no. 4 (2009): 873–93. http://dx.doi.org/10.1175/2008jpo3958.1.

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Abstract The response of the circulation of a coral reef system in Kaneohe Bay, Hawaii, to incident wave forcing was investigated using field data collected during a 10-month experiment. Results from the study revealed that wave forcing was the dominant mechanism driving the circulation over much of Kaneohe Bay. As predicted theoretically, wave setup generated near the reef crest resulting from wave breaking established a pressure gradient that drove flow over the reef and out of the two reef channels. Maximum reef setup was found to be roughly proportional to the offshore wave energy flux abo
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8

Magalhães, Wagner F., and Julie H. Bailey-Brock. "A new species of Acrocirrus (Polychaeta: Acrocirridae) from Coconut Island, Oahu, Hawaii." Journal of the Marine Biological Association of the United Kingdom 92, no. 5 (2011): 1019–22. http://dx.doi.org/10.1017/s0025315411000634.

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A new species of Acrocirrus is described from shallow waters of Coconut Island in Kaneohe Bay, Oahu, Hawaii. Acrocirrus bansei sp. nov. is an Acrocirrus whose segment 13 (chaetiger 11) is modified and equipped with a heavy neuropodial acicular hook. This new species is most similar to A. frontifilis based on the presence of notopodial cirri, which have been, up to now, a unique feature of A. frontifilis. The species differ most notably by the absence of the notopodial cirri on the posterior chaetigers. A key to all recognized species of Acrocirrus is presented.
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9

Nishikawa, A., R. A. Kinzie, and K. Sakai. "Fragmentation and genotypic diversity of the scleractinian coral Montipora capitata in Kaneohe Bay, Hawaii." Journal of the Marine Biological Association of the United Kingdom 89, no. 1 (2008): 101–7. http://dx.doi.org/10.1017/s0025315408002865.

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The fragmentation and genotypic diversity of Montipora capitata was determined in Kaneohe Bay, Hawaii, using field investigations and allozyme electrophoresis. Two stations were established in the Bay, one in the centre (exposed reef edge, EXPO) and the other at the south end (sheltered lagoonal reef, SHEL). Although the number and mean per cent cover of attached colonies did not differ significantly between the two habitats, number and cover of unattached colonies (fragments) were significantly higher at the sheltered habitat. Thirty-seven genotypes were detected in 176 samples using two or t
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10

Chiappa-Carrara, X. "Feeding behavior of the hawaiian anchovy encrasicholina purpurea fowler (pisces: engraulidae) in kaneohe bay hawaii." Ciencias Marinas 22, no. 1 (1996): 73–89. http://dx.doi.org/10.7773/cm.v22i1.833.

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11

Fagan, Kathryn E., and Fred T. Mackenzie. "Air–sea CO2 exchange in a subtropical estuarine-coral reef system, Kaneohe Bay, Oahu, Hawaii." Marine Chemistry 106, no. 1-2 (2007): 174–91. http://dx.doi.org/10.1016/j.marchem.2007.01.016.

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12

Zabin, CJ. "Battle of the barnacle newcomers: niche compression in invading species in Kaneohe Bay, Oahu, Hawaii." Marine Ecology Progress Series 381 (April 17, 2009): 175–82. http://dx.doi.org/10.3354/meps07968.

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13

Wetherbee, Bradley M., Kim N. Holland, Carl G. Meyer, and Christopher G. Lowe. "Use of a marine reserve in Kaneohe Bay, Hawaii by the giant trevally, Caranx ignobilis." Fisheries Research 67, no. 3 (2004): 253–63. http://dx.doi.org/10.1016/j.fishres.2003.11.004.

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14

Drupp, Patrick, Eric Heinen De Carlo, Fred T. Mackenzie, Paul Bienfang, and Christopher L. Sabine. "Nutrient Inputs, Phytoplankton Response, and CO2 Variations in a Semi-Enclosed Subtropical Embayment, Kaneohe Bay, Hawaii." Aquatic Geochemistry 17, no. 4-5 (2011): 473–98. http://dx.doi.org/10.1007/s10498-010-9115-y.

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15

Tanaka, Katsumasa, Michael W. Guidry, and Nicolas Gruber. "Ecosystem Responses of the Subtropical Kaneohe Bay, Hawaii, to Climate Change: A Nitrogen Cycle Modeling Approach." Aquatic Geochemistry 19, no. 5-6 (2013): 569–90. http://dx.doi.org/10.1007/s10498-013-9209-4.

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16

Aeby, GS, M. Ross, GJ Williams, TD Lewis, and TM Work. "Disease dynamics of Montipora white syndrome within Kaneohe Bay, Oahu, Hawaii: distribution, seasonality, virulence, and transmissibility." Diseases of Aquatic Organisms 91, no. 1 (2010): 1–8. http://dx.doi.org/10.3354/dao02247.

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17

Grottoli, A. G. "Variability of stable isotopes and maximum linear extension in reef-coral skeletons at Kaneohe Bay, Hawaii." Marine Biology 135, no. 3 (1999): 437–49. http://dx.doi.org/10.1007/s002270050644.

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18

Kobayashi, D. R. "Fine-scale distribution of larval fishes: patterns and processes adjacent to coral reefs in Kaneohe Bay, Hawaii." Marine Biology 100, no. 3 (1989): 285–93. http://dx.doi.org/10.1007/bf00391141.

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19

Ringuet, Stephanie, and Fred T. Mackenzie. "Controls on nutrient and phytoplankton dynamics during normal flow and storm runoff conditions, southern Kaneohe Bay, Hawaii." Estuaries 28, no. 3 (2005): 327–37. http://dx.doi.org/10.1007/bf02693916.

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20

De Carlo, Eric Heinen, Rachel Solomon, Chris Ostrander, et al. "Productivity and CO2 exchange between the ocean and atmosphere in Kaneohe Bay, Hawaii, a subtropical coastal embayment." Geochimica et Cosmochimica Acta 70, no. 18 (2006): A135. http://dx.doi.org/10.1016/j.gca.2006.06.286.

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21

Lawrence, SA, SP Wilkinson, JE Davy, et al. "Influence of local environmental variables on the viral consortia associated with the coral Montipora capitata from Kaneohe Bay, Hawaii, USA." Aquatic Microbial Ecology 74, no. 3 (2015): 251–62. http://dx.doi.org/10.3354/ame01743.

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22

Williams, Susan L., and Robert C. Carpenter. "Effects of unidirectional and oscillatory water flow on nitrogen fixation (acetylene reduction) in coral reef algal turfs, Kaneohe Bay, Hawaii." Journal of Experimental Marine Biology and Ecology 226, no. 2 (1998): 293–316. http://dx.doi.org/10.1016/s0022-0981(97)00252-9.

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23

Hunter, Cynthia L., Emily Krause, John Fitzpatrick, and John Kennedy. "Current and historic distribution and abundance of the inarticulated brachiopod, Lingula reevii Davidson (1880), in Kaneohe Bay, Oahu, Hawaii, USA." Marine Biology 155, no. 2 (2008): 205–10. http://dx.doi.org/10.1007/s00227-008-1018-8.

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24

Stimson, J., S. Larned, and E. Conklin. "Effects of herbivory, nutrient levels, and introduced algae on the distribution and abundance of the invasive macroalga Dictyosphaeria cavernosa in Kaneohe Bay, Hawaii." Coral Reefs 19, no. 4 (2001): 343–57. http://dx.doi.org/10.1007/s003380000123.

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25

Hagedorn, Mary, Virginia L. Carter, Claire Lager, et al. "Potential bleaching effects on coral reproduction." Reproduction, Fertility and Development 28, no. 8 (2016): 1061. http://dx.doi.org/10.1071/rd15526.

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Bleaching profoundly impacts coral reproduction, often for years after an event. However, detailed reproductive characteristics of coral after bleaching have not been broadly described, especially as they relate to cryopreservation. Therefore, in the present study we measured several reproductive characteristics in coral in Kaneohe Bay, Hawaii, for two species, namely Fungia scutaria and Montipora capitata, during the bleaching period of 2014 and 2015. We examined spawning periods, egg morphometry, sperm concentration, fresh and cryopreserved sperm motility exposed to different concentrations
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26

II, J. J. KANEKO, R. YAMADA, J. A. BROCK, and R. M. NAKAMURA. "Infection of tilapia, Oreochromis mossambicus (Trewavas), by a marine monogenean, Neobenedenia melleni (MacCallum, 1927) Yamaguti, 1963 in Kaneohe Bay, Hawaii, USA, and its treatment." Journal of Fish Diseases 11, no. 4 (1988): 295–300. http://dx.doi.org/10.1111/j.1365-2761.1988.tb01225.x.

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27

Goodman, James A., ZhongPing Lee, and Susan L. Ustin. "Influence of atmospheric and sea-surface corrections on retrieval of bottom depth and reflectance using a semi-analytical model: a case study in Kaneohe Bay, Hawaii." Applied Optics 47, no. 28 (2008): F1. http://dx.doi.org/10.1364/ao.47.0000f1.

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28

Williams, T. M., J. E. Haun, and W. A. Friedl. "The diving physiology of bottlenose dolphins (Tursiops truncatus). I. Balancing the demands of exercise for energy conservation at depth." Journal of Experimental Biology 202, no. 20 (1999): 2739–48. http://dx.doi.org/10.1242/jeb.202.20.2739.

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During diving, marine mammals must rely on the efficient utilization of a limited oxygen reserve sequestered in the lungs, blood and muscles. To determine the effects of exercise and apnea on the use of these reserves, we examined the physiological responses of adult bottlenose dolphins (Tursiops truncatus) trained to breath-hold on the water surface or to dive to submerged targets at depths between 60 and 210 m. Changes in blood lactate levels, in partial pressures of oxygen and carbon dioxide and in heart rate were assessed while the dolphins performed sedentary breath-holds. The effects of
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29

Zhang, Huan, and Senjie Lin. "Development of a cob-18S rRNA Gene Real-Time PCR Assay for Quantifying Pfiesteria shumwayae in the Natural Environment." Applied and Environmental Microbiology 71, no. 11 (2005): 7053–63. http://dx.doi.org/10.1128/aem.71.11.7053-7063.2005.

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ABSTRACT Despite the fact that the heterotrophic dinoflagellate Pfiesteria shumwayae is an organism of high interest due to alleged toxicity, its abundance in natural environments is poorly understood. To address this inadequacy, a real-time quantitative PCR assay based on mitochondrial cytochrome b (cob) and18S rRNA gene was developed and P. shumwayae abundance was investigated in several geographic locations. First, cob and its 5′-end region were isolated from a P. shumwayae culture, revealing three different copies, each consisting of an identical cob coding region and an unidentified regio
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30

Kerwin, Allison H., and Spencer V. Nyholm. "Reproductive System Symbiotic Bacteria Are Conserved between Two Distinct Populations ofEuprymna scolopesfrom Oahu, Hawaii." mSphere 3, no. 2 (2018). http://dx.doi.org/10.1128/msphere.00531-17.

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ABSTRACTFemale Hawaiian bobtail squid,Euprymna scolopes, harbor a symbiotic bacterial community in a reproductive organ, the accessory nidamental gland (ANG). This community is known to be stable over several generations of wild-caught bobtail squid but has, to date, been examined for only one population in Maunalua Bay, Oahu, HI. This study assessed the ANG and corresponding egg jelly coat (JC) bacterial communities for another genetically isolated host population from Kaneohe Bay, Oahu, HI, using 16S amplicon sequencing. The bacterial communities from the ANGs and JCs of the two populations
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