Mangmang, Jonathan S. "Plant growth promotion by rhizobacteria in aquaponics." Thesis, The University of Sydney, 2015. http://hdl.handle.net/2123/14863.
Abstract:
Wastewater or fish effluent (FE) from freshwater aquaculture can be a good and cheap liquid fertiliser for plants. However, while it represents a good source of nutrients to support plant growth in a system called aquaponics, it appears that its use needs to be optimised to take full advantage of the potential benefits. Apart from mineral amendments, the use of beneficial microorganisms that can have a direct impact on plant growth and nutrient utilisation could be a promising option. Plant growth promoting rhizobacteria (PGPR) are a group of rhizospheric bacteria, when introduced in association with the host plant at optimum density, can enhance plant growth and health. One well-known and versatile PGPR is Azospirillum brasilense that has numerous beneficial effects on plants. The production of phytohormones by the bacterium has been proposed as one of the major mechanisms responsible for the plant growth promoting effects observed in plants inoculated with Azospirillum. Hence, this PGPR could be a valuable input in vegetable production under an aquaponics system. In addition, despite the widespread studies conducted with this PGPR in various crops, there is no published report on vegetables fertilised with fish effluent or under an aquaponics system. This study focuses on evaluating the role of PGPR, particularly A. brasilense, on the growth and development of selected vegetable crops fertilised with fish effluent and using an aquaponics system. Strains of A. brasilense Sp7, Sp7-S and Sp245, Herbaspirillum seropedicea and Burkholderia phytofirmans PsJNT were used to inoculate seeds and/or seedlings by soaking and/or drenching. Inoculated and uninoculated seeds and seedlings were germinated and raised in controlled growing cabinets and a greenhouse, respectively. PGPR-inoculated vegetable seeds generally germinated faster and had better early seedling growth than uninoculated controls. Cucumber seeds inoculated with strains Sp7, Sp245 and H. seropedicea exhibited increase in germination percentage and shoot length by 9 and 20%, respectively, while all PGPR improved the germination vigour index, and enhanced length and weight of seedling roots by 25 and 23%, respectively. In tomato, Sp7-S enhanced the germination value, while most PGPR, except Sp7, significantly improved the germination vigour, root length (28%) and weight (37%) with superior vigor. In lettuce, Sp7-S, Sp245 and H. seropedicea inoculation resulted in longer roots (26%). Germination vigour was also improved by inoculation, except for B. phytofirmans. This improved germination and early seedling growth characteristics may influence future crop establishment and production. Of the two laboratory-based inoculation methods used, soaking appeared to be a better technique for enhanced early seedling growth by strains of A. brasilense. This effect could be related to their unique metabolic characteristics of the strains. The growth promoting effects of A. brasilense strains on the early seedling growth of vegetables varied between the bacterial strains and crop species, In particular, strains Sp7-S and Sp245 strongly enhanced root (85%) and shoot (75%) growth, germination value and vigour in tomato when inoculated by soaking. Sp245 increased endogenous plant IAA (indole-3-acetic acid) content of cucumber and lettuce by up to 100%, irrespective of inoculation method. This work demonstrates that the strains can be used for inoculation within the studied range of cell concentrations with or without plant growth promoting (PGP) effects. However, strain Sp7 appeared to be more influential at lower inoculum concentrations (about log10 6), while Sp7-S and Sp245 at log10 7 cfu mL-1 or higher. For instance, cucumber seeds inoculated with Sp7 log10 8 and 6, Sp7-S and Sp245 log10 8 and 7 cfu mL-1 increased seedling growth, vigour index and endogenous plant IAA by up to 55%. In lettuce, the inoculation with log10 6 of Sp7, log10 7 and 6 of Sp7-S, and log10 8 and 7 of Sp245 yielded superior seedling growth with improved seedling vigour, while log10 7 and 8 of Sp7 and Sp7-S, respectively, increased plant IAA concentration by more than 20%. In tomato, Sp7 at log10 6, Sp7-S and Sp245 at log10 7 enhanced the root biomass, while inoculation with all concentrations of Sp7 and Sp7-S, and log10 8 of Sp245 significantly increased plant IAA content by up to 300%. The inoculation with the bacterial cell suspension exerted more beneficial effects on the early seedling growth, vigor and endogenous plant IAA. In cucumber, seeds inoculated with bacterial cell and those treated with IAA solutions produced longer roots and shoots by 163 and 60%, respectively. Seedlings also exhibited superior vigor. These treatments, together with culture supernatant, and combined cell and supernatant, also increased endogenous plant IAA content, in which the combined cell and supernatant produced up to four-fold greater plant IAA concentrations. In lettuce, seeds inoculated with cell suspension produced longer roots (86%) with superior seedling vigour and elevated plant IAA. In tomato, inoculation with cell suspension and treatment with IAA solutions enhanced length of roots length by up to 52 and 188%, respectively, while all treatments significantly increased the plant IAA content by 70%. These results also demonstrate that bacterial cell suspension and combined cell and supernatant showed consistent effects on the expression of plant IAA. This work suggests that the endogenous IAA levels in the seeds during germination have been altered by the activity of live bacteria and phytohormones present in the supernatant. The altered root morphology of the seedlings due to A. brasilense inoculation might have enhanced the capacity of roots to absorb water and essential minerals leading to enhanced plant growth and metabolic activity. For instance, inoculated cucumber seedlings produced longer roots (23%), greater root biomass (19%), higher total phosphorus (15%), endogenous plant IAA (101%) and peroxidase activity (134%). In lettuce, inoculation increased root length (22%), peroxidase activity (53%) and plant IAA (38%). In addition, strain Sp7 enhanced the chlorophyll and protein contents by 25 and 42%, respectively. In tomato, inoculation resulted in longer roots (67%), larger leaves (22%), higher dry matter accumulation (33%), protein (15%) and endogenous plant IAA (94%) contents. Taller seedlings (12%) with larger stems (15%) and more developed leaves (9%) with greater fresh biomass (18%) were observed with Sp7 inoculation, while two-fold increase in peroxidase activity due to strain Sp245 was detected. On the other hand, inoculated basil seedlings grown in soil produced longer roots (90%), taller seedlings (19%) with more (25%) and larger (61%) leaves, which resulted in greater seedling biomass (61%) and phosphorus content (3%), and higher peroxidase activity (122%) particularly for those inoculated with Sp245 and Sp7, respectively. These plant growth promoting effects were also observed in basil grown in an aquaponics system. These include larger stems and leaves (25%), fresh weight yield (17%), peroxidase activity (73%), phosphorus (5%) and protein (23%) contents due to inoculation. The amount of endogenous plant IAA (27%) and chlorophyll (13%) contents were also increased by Sp7 and Sp7-S inoculation, respectively. This further suggests that A. brasilense could be a valuable agent to help maximize the usefulness of fish effluent or wastewater from freshwater aquaculture for vegetable seedling production. The 16S rDNA terminal restriction fragment length polymorphism (T-RFLP) analysis revealed that inoculation with A. brasilense has no adverse effect to the existing rhizobacterial communities (measured by the changes in the distribution of detectable operational taxonomic unit (OTU) (represented by TRF)) in the root rhizosphere of vegetables (i.e. lettuce, cucumber and basil) grown under different systems (i.e. sterile artificial substrate, soil and aquaponics). This highlights that this PGPR did not cause disturbance to the resident microbial communities or imbalance of the normal functioning of the system. In aquaponics, the presence of a substantial density of A. brasilense strains in the root rhizosphere of basil and the enhanced plant growth and physiological parameters of inoculated basil may imply that Azospirillum have successfully established a beneficial association with the existing bacterial populations. Moreover, this study demonstrates the potential of Azospirillum to be a practical agent for enhancing plant growth and development of vegetables fertilised with fish effluent and under aquaponics system. Directing future research endeavors to better understand the basic mechanisms occurring in the Azospirillum-plant interaction rather than exploring large scale application of this PGPR would support further development of the bioinoculant technology.