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Journal articles on the topic 'Plant U-box'

Author: Grafiati

Published: 4 June 2021

Last updated: 1 February 2022

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1

Kim, Dae Yeon, Yong Jin Lee, Min Jeong Hong, Jae Ho Kim, and Yong Weon Seo. "Genome Wide Analysis of U-Box E3 Ubiquitin Ligases in Wheat (Triticum aestivum L.)." International Journal of Molecular Sciences 22, no. 5 (2021): 2699. http://dx.doi.org/10.3390/ijms22052699.

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U-box E3 ligase genes play specific roles in protein degradation by post-translational modification in plant signaling pathways, developmental stages, and stress responses; however, little is known about U-box E3 genes in wheat. We identified 213 U-box E3 genes in wheat based on U-box and other functional domains in their genome sequences. The U-box E3 genes were distributed among 21 chromosomes and most showed high sequence homology with homoeologous U-box E3 genes. Synteny analysis of wheat U-box E3 genes was conducted with other plant species such as Brachypodium distachyon, barley, rice, T

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2

Jung, Choonkyun, Pingzhi Zhao, Jun Sung Seo, Nobutaka Mitsuda, Shulin Deng, and Nam-Hai Chua. "PLANT U-BOX PROTEIN10 Regulates MYC2 Stability in Arabidopsis." Plant Cell 27, no. 7 (2015): 2016–31. http://dx.doi.org/10.1105/tpc.15.00385.

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3

Li, Min, Si-qi Shen, Yi-bin Xing, et al. "Vitis vinifera VvPUB17 functions as a E3 ubiquitin ligase and enhances powdery mildew resistance via the salicylic acid signaling pathway." Journal of Berry Research 11, no. 3 (2021): 419–30. http://dx.doi.org/10.3233/jbr-210709.

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BACKGROUND: Powdery mildew affects grapevine growth and development and reduces grapevine fruit yield and quality. Plant U-box (PUB) E3 ubiquitin ligases play important roles in ubiquitin/proteasome-mediated protein degradation during plant development and in the plant defense response. OBJECTIVE: We cloned the VvPUB17 gene from Vitis vinifera and analyzed that VvPUB17 enhanced the resistance of grapevine to powdery mildew through the SA signal pathway. METHODS: Pathogen inoculation of Arabidopsis thaliana and grapevine plants was carried out by the tableting method. Gene expression was analyz

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4

Connelly, S., and W. Filipowicz. "Activity of chimeric U small nuclear RNA (snRNA)/mRNA genes in transfected protoplasts of Nicotiana plumbaginifolia: U snRNA 3'-end formation and transcription initiation can occur independently in plants." Molecular and Cellular Biology 13, no. 10 (1993): 6403–15. http://dx.doi.org/10.1128/mcb.13.10.6403.

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Formation of the 3' ends of RNA polymerase II (Pol II)-specific U small nuclear RNAs (U snRNAs) in vertebrate cells is dependent upon transcription initiation from the U snRNA gene promoter. Moreover, U snRNA promoters are unable to direct the synthesis of functional polyadenylated mRNAs. In this work, we have investigated whether U snRNA 3'-end formation and transcription initiation are also coupled in plants. We have first characterized the requirements for 3'-end formation of an Arabidopsis U2 snRNA expressed in transfected protoplasts of Nicotiana plumbaginifolia. We found that the 3'-end-

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5

Connelly, S., and W. Filipowicz. "Activity of chimeric U small nuclear RNA (snRNA)/mRNA genes in transfected protoplasts of Nicotiana plumbaginifolia: U snRNA 3'-end formation and transcription initiation can occur independently in plants." Molecular and Cellular Biology 13, no. 10 (1993): 6403–15. http://dx.doi.org/10.1128/mcb.13.10.6403-6415.1993.

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Formation of the 3' ends of RNA polymerase II (Pol II)-specific U small nuclear RNAs (U snRNAs) in vertebrate cells is dependent upon transcription initiation from the U snRNA gene promoter. Moreover, U snRNA promoters are unable to direct the synthesis of functional polyadenylated mRNAs. In this work, we have investigated whether U snRNA 3'-end formation and transcription initiation are also coupled in plants. We have first characterized the requirements for 3'-end formation of an Arabidopsis U2 snRNA expressed in transfected protoplasts of Nicotiana plumbaginifolia. We found that the 3'-end-

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6

Trujillo, Marco. "News from the PUB: plant U-box type E3 ubiquitin ligases." Journal of Experimental Botany 69, no. 3 (2017): 371–84. http://dx.doi.org/10.1093/jxb/erx411.

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7

Graat, Y., J. O. Rosa, M. P. Nepomuceno, L. B. Carvalho, and P. L. C. A. Alves. "Grass Weeds Interfering with Eucalypt: Effects of the Distance of Coexistence on the Initial Plant Growth." Planta Daninha 33, no. 2 (2015): 203–11. http://dx.doi.org/10.1590/0100-83582015000200005.

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Two experiments were carried out to evaluate the initial plant growth of Eucalyptus urograndis growing in coexistence with Urochloa decumbens and U. ruziziensis. In 100-L box, one plant of U. decumbens or U. ruziziensis grew in coexistence with one plant of E. urograndis clones C219H or H15, respectively, in the distances of 0, 5, 10, 15, 20, 25, 30, 35, and 40 cm from the crop. After 30, 60, 90 (both clones), and 150 days (just for H15), growth characteristics were evaluated. Plants of both clones, growing in weed-free situations, showed a better growth and development than plants that grew i

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8

Feke, Ann M., Jing Hong, Wei Liu, and Joshua M. Gendron. "A Decoy Library Uncovers U-Box E3 Ubiquitin Ligases That Regulate Flowering Time in Arabidopsis." Genetics 215, no. 3 (2020): 699–712. http://dx.doi.org/10.1534/genetics.120.303199.

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Targeted degradation of proteins is mediated by E3 ubiquitin ligases and is important for the execution of many biological processes. Redundancy has prevented the genetic characterization of many E3 ubiquitin ligases in plants. Here, we performed a reverse genetic screen in Arabidopsis using a library of dominant-negative U-box-type E3 ubiquitin ligases to identify their roles in flowering time and reproductive development. We identified five U-box decoy transgenic populations that have defects in flowering time or the floral development program. We used additional genetic and biochemical stud

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9

Wiborg, Jakob, Charlotte O'Shea, and Karen Skriver. "Biochemical function of typical and variant Arabidopsis thaliana U-box E3 ubiquitin-protein ligases." Biochemical Journal 413, no. 3 (2008): 447–57. http://dx.doi.org/10.1042/bj20071568.

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The variance of the U-box domain in 64 Arabidopsis thaliana (thale cress) E3s (ubiquitin-protein ligases) was used to examine the interactions between E3s and E2s (ubiquitin-conjugating enzymes). E2s and E3s are components of the ubiquitin protein degradation pathway. Seven U-box proteins were analysed for their ability to ubiquitinate proteins in vitro in co-operation with different E2s. All U-box domains exhibited ubiquitination activity and interacted productively with UBC4/5-type E2s. Three and four of the U-box domains mediated ubiquitin addition in the presence of UBC13 and UBC7 E2s resp

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10

Knop, Jan, Tim Lienemann, Haifa El-Kilani, et al. "Structural Features of a Full-Length Ubiquitin Ligase Responsible for the Formation of Patches at the Plasma Membrane." International Journal of Molecular Sciences 22, no. 17 (2021): 9455. http://dx.doi.org/10.3390/ijms22179455.

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Plant U-box armadillo repeat (PUB-ARM) ubiquitin (Ub) ligases have important functions in plant defense through the ubiquitination of target proteins. Defense against pathogens involves vesicle trafficking and the formation of extracellular vesicles. The PUB-ARM protein SENESCENCE ASSOCIATED UBIQUITIN E3 LIGASE1 (SAUL1) can form patches at the plasma membrane related to tethering multi-vesicular bodies (MVBs) to the plasma membrane. We uncovered the structure of a full-length plant ubiquitin ligase and the structural requirements of SAUL1, which are crucial for its function in patch formation.

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11

Li, Jing, Yongxia Zhang, Zhong Gao, et al. "Plant U‐box E3 ligases PUB25 and PUB26 control organ growth in Arabidopsis." New Phytologist 229, no. 1 (2020): 403–13. http://dx.doi.org/10.1111/nph.16885.

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12

Wang, Ning, Yandang Liu, Yuanyuan Cai, Jiajun Tang, Yan Li, and Junyi Gai. "The soybean U-box gene GmPUB6 regulates drought tolerance in Arabidopsis thaliana." Plant Physiology and Biochemistry 155 (October 2020): 284–96. http://dx.doi.org/10.1016/j.plaphy.2020.07.016.

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13

Cunnac, Sébastien, Christian Boucher, and Stéphane Genin. "Characterization of the cis-Acting Regulatory Element Controlling HrpB-Mediated Activation of the Type III Secretion System and Effector Genes in Ralstonia solanacearum." Journal of Bacteriology 186, no. 8 (2004): 2309–18. http://dx.doi.org/10.1128/jb.186.8.2309-2318.2004.

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ABSTRACT The ability of Ralstonia solanacearum to cause disease on plants depends on its type III secretion system (TTSS) encoded by hrp genes. The expression of hrp genes and known TTSS substrates is coordinately regulated by HrpB, a member of the AraC family of transcriptional regulators. Two HrpB-regulated promoters (hrpY and popABC) were characterized by deletion analysis, and the HrpB-dependent activation of these promoters was found to be conferred by a 25-nucleotide DNA element, the hrp II box (TTCGn16TTCG), which is present in other hrp promoters. The hrp II box element is an imperfect

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14

Zhou, Jinggeng, Derui Liu, Ping Wang, et al. "Regulation of Arabidopsis brassinosteroid receptor BRI1 endocytosis and degradation by plant U-box PUB12/PUB13-mediated ubiquitination." Proceedings of the National Academy of Sciences 115, no. 8 (2018): E1906—E1915. http://dx.doi.org/10.1073/pnas.1712251115.

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Plants largely rely on plasma membrane (PM)-resident receptor-like kinases (RLKs) to sense extracellular and intracellular stimuli and coordinate cell differentiation, growth, and immunity. Several RLKs have been shown to undergo internalization through the endocytic pathway with a poorly understood mechanism. Here, we show that endocytosis and protein abundance of the Arabidopsis brassinosteroid (BR) receptor, BR INSENSITIVE1 (BRI1), are regulated by plant U-box (PUB) E3 ubiquitin ligase PUB12- and PUB13-mediated ubiquitination. BR perception promotes BRI1 ubiquitination and association with

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15

Li, Wei, Liangying Dai, and Guo-Liang Wang. "PUB13, a U-box/ARM E3 ligase, regulates plant defense, cell death, and flowering time." Plant Signaling & Behavior 7, no. 8 (2012): 898–900. http://dx.doi.org/10.4161/psb.20703.

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16

Zeng, Li-Rong, Chan Ho Park, R. C. Venu, Julian Gough, and Guo-Liang Wang. "Classification, Expression Pattern, and E3 Ligase Activity Assay of Rice U-Box-Containing Proteins." Molecular Plant 1, no. 5 (2008): 800–815. http://dx.doi.org/10.1093/mp/ssn044.

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17

Hu, Dengke, Qinqin Xie, Qianying Liu, et al. "Genome-Wide Distribution, Expression and Function Analysis of the U-Box Gene Family in Brassica oleracea L." Genes 10, no. 12 (2019): 1000. http://dx.doi.org/10.3390/genes10121000.

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The plant U-box (PUB) protein family plays an important role in plant growth and development. The U-box gene family has been well studied in Arabidopsis thaliana, Brassica rapa, rice, etc., but there have been no systematic studies in Brassica oleracea. In this study, we performed genome-wide identification and evolutionary analysis of the U-box protein family of B. oleracea. Firstly, based on the Brassica database (BRAD) and the Bolbase database, 99 Brassica oleracea PUB genes were identified and divided into seven groups (I–VII). The BoPUB genes are unevenly distributed on the nine chromosom

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18

Monte, E., V. Amador, E. Russo, J. Mart�nez-Garc�a, and S. Prat. "PHOR1: A U-Box GA Signaling Component With a Role in Proteasome Degradation?" Journal of Plant Growth Regulation 22, no. 2 (2003): 152–62. http://dx.doi.org/10.1007/s00344-003-0029-4.

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19

Yee, D., and D. R. Goring. "The diversity of plant U-box E3 ubiquitin ligases: from upstream activators to downstream target substrates." Journal of Experimental Botany 60, no. 4 (2009): 1109–21. http://dx.doi.org/10.1093/jxb/ern369.

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20

Kinoshita, A., C. A. ten Hove, R. Tabata, et al. "A plant U-box protein, PUB4, regulates asymmetric cell division and cell proliferation in the root meristem." Development 142, no. 3 (2015): 444–53. http://dx.doi.org/10.1242/dev.113167.

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21

Wang, Wenlong, Wenqiang Wang, Yunzhen Wu, et al. "The involvement of wheat U‐box E3 ubiquitin ligase TaPUB1 in salt stress tolerance." Journal of Integrative Plant Biology 62, no. 5 (2019): 631–51. http://dx.doi.org/10.1111/jipb.12842.

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22

Bergler, J., and S. Hoth. "Plant U-box armadillo repeat proteins AtPUB18 and AtPUB19 are involved in salt inhibition of germination in Arabidopsis." Plant Biology 13, no. 5 (2011): 725–30. http://dx.doi.org/10.1111/j.1438-8677.2010.00431.x.

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23

Monaghan, Jacqueline, Fang Xu, Minghui Gao, et al. "Two Prp19-Like U-Box Proteins in the MOS4-Associated Complex Play Redundant Roles in Plant Innate Immunity." PLoS Pathogens 5, no. 7 (2009): e1000526. http://dx.doi.org/10.1371/journal.ppat.1000526.

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24

Goring, D. "The Plant U-box/ARM E3 ligases as potential intracellular signalling proteins for the S-Domain Receptor Kinases." Comparative Biochemistry and Physiology Part A: Molecular & Integrative Physiology 150, no. 3 (2008): S177—S178. http://dx.doi.org/10.1016/j.cbpa.2008.04.472.

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25

Kim, Eun-Ji, Se-Hwa Lee, Chan-Ho Park, et al. "Corrigendum to: Plant U-Box 40 mediates degradation of the brassinosteroid-responsive transcription factor BZR1 in Arabidopsis roots." Plant Cell 33, no. 8 (2021): 2900. http://dx.doi.org/10.1093/plcell/koab127.

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26

Shi, Songmei, Qiguo Gao, Tonghong Zuo, et al. "Identification and characterization of BoPUB3: a novel interaction protein with S-locus receptor kinase in Brassica oleracea L." Acta Biochimica et Biophysica Sinica 51, no. 7 (2019): 723–33. http://dx.doi.org/10.1093/abbs/gmz057.

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Abstract Armadillo repeat containing 1 (ARC1) is phosphorylated by S-locus receptor kinase (SRK) and functions as a positive regulator in self-incompatibility response of Brassica. However, ARC1 only causes partial breakdown of the self-incompatibility response, and other SRK downstream factors may also participate in the self-incompatibility signaling pathway. In the present study, to search for SRK downstream targets, a plant U-box protein 3 (BoPUB3) was identified from the stigma of Brassica oleracea L. BoPUB3 was highly expressed in the stigma, and its expression was increased with the sti

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27

Qin, Qiao, Yinxiao Wang, Liyu Huang, et al. "A U-box E3 ubiquitin ligase OsPUB67 is positively involved in drought tolerance in rice." Plant Molecular Biology 102, no. 1-2 (2019): 89–107. http://dx.doi.org/10.1007/s11103-019-00933-8.

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28

Han, Peng-Liang, Yuan-Hua Dong, Kai-Di Gu, Jian-Qiang Yu, Da-Gang Hu, and Yu-Jin Hao. "The apple U-box E3 ubiquitin ligase MdPUB29 contributes to activate plant immune response to the fungal pathogen Botryosphaeria dothidea." Planta 249, no. 4 (2019): 1177–88. http://dx.doi.org/10.1007/s00425-018-03069-z.

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29

Yoo, Yo-Han, Xu Jiang, and Ki-Hong Jung. "An Abiotic Stress Responsive U-Box E3 Ubiquitin Ligase Is Involved in OsGI-Mediating Diurnal Rhythm Regulating Mechanism." Plants 9, no. 9 (2020): 1071. http://dx.doi.org/10.3390/plants9091071.

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The plant U-box (PUB) protein is the E3 ligase that plays roles in the degradation or post-translational modification of target proteins. In rice, 77 U-box proteins were identified and divided into eight classes according to the domain configuration. We performed a phylogenomic analysis by integrating microarray expression data under abiotic stress to the phylogenetic tree context. Real-time quantitative reverse transcription polymerase chain reaction (qRT-PCR) expression analyses identified that eight, twelve, and eight PUB family genes are associated with responses to drought, salinity, and

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30

Disch, Eva-Maria, Meixuezi Tong, Tanja Kotur, et al. "Membrane-Associated Ubiquitin Ligase SAUL1 Suppresses Temperature- and Humidity-Dependent Autoimmunity in Arabidopsis." Molecular Plant-Microbe Interactions® 29, no. 1 (2016): 69–80. http://dx.doi.org/10.1094/mpmi-07-15-0146-r.

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Plants have evolved elaborate mechanisms to regulate pathogen defense. Imbalances in this regulation may result in autoimmune responses that are affecting plant growth and development. In Arabidopsis, SAUL1 encodes a plant U-box ubiquitin ligase and regulates senescence and cell death. Here, we show that saul1-1 plants exhibit characteristics of an autoimmune mutant. A decrease in relative humidity or temperature resulted in reduced growth and systemic lesioning of saul1-1 rosettes. These physiological changes are associated with increased expression of salicylic acid–dependent and pathogenesi

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31

Cho, Seok Keun, Moon Young Ryu, Charlotte Song, June M. Kwak, and Woo Taek Kim. "Arabidopsis PUB22 and PUB23 Are Homologous U-Box E3 Ubiquitin Ligases That Play Combinatory Roles in Response to Drought Stress." Plant Cell 20, no. 7 (2008): 1899–914. http://dx.doi.org/10.1105/tpc.108.060699.

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32

Zhang, Jianfeng, Anne C. Rea, Tingdong Fu, Chaozhi Ma, and June B. Nasrallah. "Exploring the role of a stigma-expressed plant U-box gene in the pollination responses of transgenic self-incompatible Arabidopsis thaliana." Plant Reproduction 27, no. 2 (2014): 59–68. http://dx.doi.org/10.1007/s00497-014-0240-4.

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33

Wang, Nan, Yadi Xing, Qijin Lou, et al. "Dwarf and short grain 1 , encoding a putative U-box protein regulates cell division and elongation in rice." Journal of Plant Physiology 209 (February 2017): 84–94. http://dx.doi.org/10.1016/j.jplph.2016.11.012.

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34

Wang, Kaili, Qiya Yang, Boen Lanhuang, et al. "Genome-wide investigation and analysis of U-box Ubiquitin–Protein ligase gene family in apple: Expression profiles during Penicillium expansum infection process." Physiological and Molecular Plant Pathology 111 (August 2020): 101487. http://dx.doi.org/10.1016/j.pmpp.2020.101487.

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35

Stanosz, G., D. Smith, and J. Stanosz. "Sawadaea Powdery Mildew of Box Elder (Acer negundo) in Wisconsin." Plant Disease 91, no. 5 (2007): 636. http://dx.doi.org/10.1094/pdis-91-5-0636b.

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Box elder leaves affected by powdery mildew were collected from a single tree in an urban yard in the fall of 2006 in Madison, WI. As much as half of the area of the leaf blades, when viewed from above or below, was pale green-to-tan and necrotic. Mycelium was not visible to the eye on either the upper or lower leaf surfaces, but very sparse white mycelium was observed on the lower surface of leaves with the aid of a dissecting microscope. Chasmothecia were present singly or in groups of a few on the lower surface of leaves. Morphology of the chasmothecia, including simple and bifid appendages

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36

González-Lamothe, Rocío, Dimitrios I. Tsitsigiannis, Andrea A. Ludwig, Mireia Panicot, Ken Shirasu, and Jonathan D. G. Jones. "The U-Box Protein CMPG1 Is Required for Efficient Activation of Defense Mechanisms Triggered by Multiple Resistance Genes in Tobacco and Tomato." Plant Cell 18, no. 4 (2006): 1067–83. http://dx.doi.org/10.1105/tpc.106.040998.

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37

Min, Hye Jo, Li Hua Cui, Tae Rin Oh, Jong Hum Kim, Tae‐Wuk Kim, and Woo Taek Kim. "Os BZR 1 turnover mediated by Os SK 22‐regulated U‐box E3 ligase Os PUB 24 in rice BR response." Plant Journal 99, no. 3 (2019): 426–38. http://dx.doi.org/10.1111/tpj.14332.

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38

Fan, Si, Samnhita Raychaudhuri, Olivia Kraus, Md Shahinozzaman, Leila Lofti, and Diana N. Obanda. "Urtica dioica Whole Vegetable as a Functional Food Targeting Fat Accumulation and Insulin Resistance-a Preliminary Study in a Mouse Pre-Diabetic Model." Nutrients 12, no. 4 (2020): 1059. http://dx.doi.org/10.3390/nu12041059.

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The shoot of Urtica dioica is used in several cultures as a vegetable or herb. However, not much has been studied about the potential of this plant when consumed as a whole food/vegetable rather than an extract for dietary supplements. In a 12-week dietary intervention study, we tested the effect of U. dioica vegetable on high fat diet induced obesity and insulin resistance in C57BL/6J mice. Mice were fed ad libitum with isocaloric diets containing 10% fat or 45% fat with or without U. dioica. The diet supplemented with U. dioica attenuated high fat diet induced weight gain (p < 0.005; n =

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39

Sharma, Manisha, and Girdhar K. Pandey. "OsPUB75, an Armadillo/U-box protein interacts with GSK3 kinase and functions as negative regulator of abiotic stress responses." Environmental and Experimental Botany 161 (May 2019): 388–98. http://dx.doi.org/10.1016/j.envexpbot.2018.10.022.

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40

Li, Hongkun, Meijia Dou, Xinyu Wang, et al. "Optimization of Cellulase Production by a Novel Endophytic Fungus Penicillium oxalicum R4 Isolated from Taxus cuspidata." Sustainability 13, no. 11 (2021): 6006. http://dx.doi.org/10.3390/su13116006.

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Endophytic fungi inside a plant can degrade a portion of plant lignin and cellulose. Endophytic Penicillium is one of the industrial microorganisms with the advantage of producing enzymes with a complete enzyme system that can be secreted into the extracellular space. The natural evolution of ancient tree species from special natural geographic environments to screen out cellulase-producing strains with excellent characteristics provides a promising direction for future industrial enzymes. The present study successfully isolated and screened a novel fungal endophyte, Penicillium oxalicum R4, w

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41

Yang, Qiujiao, Jianhang Guo, Hairuo Zeng, et al. "The receptor-like cytoplasmic kinase CDG1 negatively regulates Arabidopsis pattern-triggered immunity and is involved in AvrRpm1-induced RIN4 phosphorylation." Plant Cell 33, no. 4 (2021): 1341–60. http://dx.doi.org/10.1093/plcell/koab033.

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Abstract Arabidopsis CDG1 negatively regulates flg22- and chitin-triggered immunity by promoting FLS2 and CERK1 degradation and is partially required for bacterial effector AvrRpm1-induced RIN4 phosphorylation. Negative regulators play indispensable roles in pattern-triggered immunity in plants by preventing sustained immunity impeding growth. Here, we report Arabidopsis thaliana CONSTITUTIVE DIFFERENTIAL GROWTH1 (CDG1), a receptor-like cytoplasmic kinase VII member, as a negative regulator of bacterial flagellin/flg22- and fungal chitin-triggered immunity. CDG1 can interact with the flg22 rec

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42

Zeng, Li-Rong, Shaohong Qu, Alicia Bordeos, et al. "Spotted leaf11, a Negative Regulator of Plant Cell Death and Defense, Encodes a U-Box/Armadillo Repeat Protein Endowed with E3 Ubiquitin Ligase Activity." Plant Cell 16, no. 10 (2004): 2795–808. http://dx.doi.org/10.1105/tpc.104.025171.

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43

Drechsel, Gabriele, Johannes Bergler, Kathrin Wippel, Norbert Sauer, Katja Vogelmann, and Stefan Hoth. "C-terminal armadillo repeats are essential and sufficient for association of the plant U-box armadillo E3 ubiquitin ligase SAUL1 with the plasma membrane." Journal of Experimental Botany 62, no. 2 (2010): 775–85. http://dx.doi.org/10.1093/jxb/erq313.

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44

Wang, Hai, Yuqing Lu, Tiantian Jiang, Howard Berg, Cong Li, and Yiji Xia. "The Arabidopsis U-box/ARM repeat E3 ligase AtPUB4 influences growth and degeneration of tapetal cells, and its mutation leads to conditional male sterility." Plant Journal 74, no. 3 (2013): 511–23. http://dx.doi.org/10.1111/tpj.12146.

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45

Seo, Dong Hye, Andosung Lee, Seong Gwan Yu, et al. "OsPUB41, a U-box E3 ubiquitin ligase, acts as a negative regulator of drought stress response in rice (Oryza Sativa L.)." Plant Molecular Biology 106, no. 4-5 (2021): 463–77. http://dx.doi.org/10.1007/s11103-021-01158-4.

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46

Lin, Zhongyuan, Meihui Liu, Rebecca Njeri Damaris, et al. "Genome-Wide DNA Methylation Profiling in the Lotus (Nelumbo nucifera) Flower Showing its Contribution to the Stamen Petaloid." Plants 8, no. 5 (2019): 135. http://dx.doi.org/10.3390/plants8050135.

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DNA methylation is a vital epigenetic modification. Methylation has a significant effect on the gene expression influencing the regulation of different physiological processes. Current studies on DNA methylation have been conducted on model plants. Lotus (Nelumbo nucifera) is a basic eudicot exhibiting variations during development, especially in flower formation. DNA methylation profiling was conducted on different flower tissues of lotuses through whole genome bisulfite sequencing (WGBS) to investigate the effects of DNA methylation on its stamen petaloid. A map of methylated cytosines at th

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47

Yano, Koji, Satoshi Shibata, Wen-Li Chen, et al. "CERBERUS, a novel U-box protein containing WD-40 repeats, is required for formation of the infection thread and nodule development in the legume-Rhizobiumsymbiosis." Plant Journal 60, no. 1 (2009): 168–80. http://dx.doi.org/10.1111/j.1365-313x.2009.03943.x.

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Sadanandom, A. "The U-box protein AtPUB17 is a functional ortholog of NtACRE276 and its E3 ubiquitin ligase activity is required for plant cell death and defence." Comparative Biochemistry and Physiology Part A: Molecular & Integrative Physiology 146, no. 4 (2007): S203. http://dx.doi.org/10.1016/j.cbpa.2007.01.450.

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Han, Peng-Liang, Chu-Kun Wang, Xiao-Juan Liu, et al. "BTB-BACK Domain E3 Ligase MdPOB1 Suppresses Plant Pathogen Defense against Botryosphaeria dothidea by Ubiquitinating and Degrading MdPUB29 Protein in Apple." Plant and Cell Physiology 60, no. 10 (2019): 2129–40. http://dx.doi.org/10.1093/pcp/pcz106.

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Abstract:

Abstract Apple ring rot is a severe disease that affects the yield and quality of apple fruits worldwide. However, the underlying molecular mechanism that involved in this process still remains largely unexplored. Here, we report that apple POZ/BTB CONTAINING-PROTEIN 1 (MdPOB1), a BTB-BACK domain E3 ligase protein, functions to suppress apple pathogen defense against Botryosphaeria dothidea (B. dothidea). Both in vitro and in vivo assays indicated that MdPOB1 interacted directly with and degraded apple U-box E3 ligase MdPUB29, a well-established positive regulator of plant innate immunity, thr

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HAN, Peng-liang, Yuan-hua DONG, Han JIANG, Da-gang HU, and Yu-jin HAO. "Molecular cloning and functional characterization of apple U-box E3 ubiquitin ligase gene MdPUB29 reveals its involvement in salt tolerance." Journal of Integrative Agriculture 18, no. 7 (2019): 1604–12. http://dx.doi.org/10.1016/s2095-3119(19)62594-3.

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