Journal articles on the topic 'Proteins crowding'
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Zhou, Huan-Xiang. "Crowding Effects of Membrane Proteins." Journal of Physical Chemistry B 113, no. 23 (2009): 7995–8005. http://dx.doi.org/10.1021/jp8107446.
Full textRhoades, Elizabeth. "Proteins: Disorder, Folding, and Crowding." Biophysical Journal 117, no. 1 (2019): 3–4. http://dx.doi.org/10.1016/j.bpj.2019.06.014.
Full textWei, Jiachen, and Fan Song. "Association equilibria for proteins interacted with crowders of short-range attraction in crowded environment." International Journal of Modern Physics B 31, no. 03 (2017): 1750007. http://dx.doi.org/10.1142/s0217979217500072.
Full textSnead, Wilton T., Carl C. Hayden, Avinash K. Gadok, et al. "Membrane fission by protein crowding." Proceedings of the National Academy of Sciences 114, no. 16 (2017): E3258—E3267. http://dx.doi.org/10.1073/pnas.1616199114.
Full textZosel, Franziska, Andrea Soranno, Karin J. Buholzer, Daniel Nettels, and Benjamin Schuler. "Depletion interactions modulate the binding between disordered proteins in crowded environments." Proceedings of the National Academy of Sciences 117, no. 24 (2020): 13480–89. http://dx.doi.org/10.1073/pnas.1921617117.
Full textHorton, Margaret R., Felix Höfling, Joachim O. Rädler, and Thomas Franosch. "Development of anomalous diffusion among crowding proteins." Soft Matter 6, no. 12 (2010): 2648. http://dx.doi.org/10.1039/b924149c.
Full textDias, Rita S. "Role of Protein Self-Association on DNA Condensation and Nucleoid Stability in a Bacterial Cell Model." Polymers 11, no. 7 (2019): 1102. http://dx.doi.org/10.3390/polym11071102.
Full textMukherji, Sutapa. "Run-length distribution of self-assembling cargos in crowded environments." Journal of Statistical Mechanics: Theory and Experiment 2025, no. 2 (2025): 023205. https://doi.org/10.1088/1742-5468/adab6f.
Full textBanks, Daniel S., and Cécile Fradin. "Anomalous Diffusion of Proteins Due to Molecular Crowding." Biophysical Journal 89, no. 5 (2005): 2960–71. http://dx.doi.org/10.1529/biophysj.104.051078.
Full textMakowski, Lee, Diane J. Rodi, Suneeta Mandava, David D. L. Minh, David B. Gore, and Robert F. Fischetti. "Molecular Crowding Inhibits Intramolecular Breathing Motions in Proteins." Journal of Molecular Biology 375, no. 2 (2008): 529–46. http://dx.doi.org/10.1016/j.jmb.2007.07.075.
Full textCandotti, Michela, and Modesto Orozco. "The Differential Response of Proteins to Macromolecular Crowding." PLOS Computational Biology 12, no. 7 (2016): e1005040. http://dx.doi.org/10.1371/journal.pcbi.1005040.
Full textPerham, Michael, Loren Stagg, and Pernilla Wittung-Stafshede. "Macromolecular crowding increases structural content of folded proteins." FEBS Letters 581, no. 26 (2007): 5065–69. http://dx.doi.org/10.1016/j.febslet.2007.09.049.
Full textChebotareva, Natalia A., Svetlana G. Roman, Vera A. Borzova, Tatiana B. Eronina, Valeriya V. Mikhaylova, and Boris I. Kurganov. "Chaperone-Like Activity of HSPB5: The Effects of Quaternary Structure Dynamics and Crowding." International Journal of Molecular Sciences 21, no. 14 (2020): 4940. http://dx.doi.org/10.3390/ijms21144940.
Full textBorzova, Vera A., Svetlana G. Roman, Anastasiya V. Pivovarova, and Natalia A. Chebotareva. "Effects of Molecular Crowding and Betaine on HSPB5 Interactions, with Target Proteins Differing in the Quaternary Structure and Aggregation Mechanism." International Journal of Molecular Sciences 23, no. 23 (2022): 15392. http://dx.doi.org/10.3390/ijms232315392.
Full textScott, Shane, Cynthia Shaheen, Brendon McGuinness, et al. "Single-molecule visualization of the effects of ionic strength and crowding on structure-mediated interactions in supercoiled DNA molecules." Nucleic Acids Research 47, no. 12 (2019): 6360–68. http://dx.doi.org/10.1093/nar/gkz408.
Full textDemosthene, Bryan, Myeongsang Lee, Ryan R. Marracino, James B. Heidings, and Ellen Hyeran Kang. "Molecular Basis for Actin Polymerization Kinetics Modulated by Solution Crowding." Biomolecules 13, no. 5 (2023): 786. http://dx.doi.org/10.3390/biom13050786.
Full textGorensek-Benitez, Annelise H., Bryan Kirk, and Jeffrey K. Myers. "Protein Fibrillation under Crowded Conditions." Biomolecules 12, no. 7 (2022): 950. http://dx.doi.org/10.3390/biom12070950.
Full textAndré, Alain A. M., and Evan Spruijt. "Liquid–Liquid Phase Separation in Crowded Environments." International Journal of Molecular Sciences 21, no. 16 (2020): 5908. http://dx.doi.org/10.3390/ijms21165908.
Full textAl-Ayoubi, S. R., P. H. Schummel, M. Golub, J. Peters, and R. Winter. "Influence of cosolvents, self-crowding, temperature and pressure on the sub-nanosecond dynamics and folding stability of lysozyme." Physical Chemistry Chemical Physics 19, no. 22 (2017): 14230–37. http://dx.doi.org/10.1039/c7cp00705a.
Full textRoss, Murial L., Jeffrey Kunkel, Steven Long, and Prashanth Asuri. "Combined Effects of Confinement and Macromolecular Crowding on Protein Stability." International Journal of Molecular Sciences 21, no. 22 (2020): 8516. http://dx.doi.org/10.3390/ijms21228516.
Full textSnead, Wilton T., Wade F. Zeno, Grace Kago, et al. "BAR scaffolds drive membrane fission by crowding disordered domains." Journal of Cell Biology 218, no. 2 (2018): 664–82. http://dx.doi.org/10.1083/jcb.201807119.
Full textLi, Chao, Xiangxiang Zhang, Mingdong Dong, and Xiaojun Han. "Progress on Crowding Effect in Cell-like Structures." Membranes 12, no. 6 (2022): 593. http://dx.doi.org/10.3390/membranes12060593.
Full textKim, Youngchan, and Jeetain Mittal. "Crowding Induced Coil-Globule Transitions of Intrinsically Disordered Proteins." Biophysical Journal 112, no. 3 (2017): 511a. http://dx.doi.org/10.1016/j.bpj.2016.11.2764.
Full textQu, Youxing, and D. W. Bolen. "Efficacy of macromolecular crowding in forcing proteins to fold." Biophysical Chemistry 101-102 (December 2002): 155–65. http://dx.doi.org/10.1016/s0301-4622(02)00148-5.
Full textMondal, Somnath, Ravula Thirupathi, and Hanudatta S. Atreya. "Carbon quantum dots as a macromolecular crowder." RSC Advances 5, no. 6 (2015): 4489–92. http://dx.doi.org/10.1039/c4ra14019b.
Full textTokuriki, N., T. Yomo, Y. Katakura, K. Ogasawara, K. Yutani, and I. Urabe. "Crowding effect of proteins with random sequence in polyethylene glycol." Seibutsu Butsuri 40, supplement (2000): S172. http://dx.doi.org/10.2142/biophys.40.s172_2.
Full textDey, Pinki, and Arnab Bhattacherjee. "Disparity in anomalous diffusion of proteins searching for their target DNA sites in a crowded medium is controlled by the size, shape and mobility of macromolecular crowders." Soft Matter 15, no. 9 (2019): 1960–69. http://dx.doi.org/10.1039/c8sm01933a.
Full textBESSA RAMOS, ESIO, KATHELIJNE WINTRAECKEN, ANS GEERLING, and RENKO DE VRIES. "SYNERGY OF DNA-BENDING NUCLEOID PROTEINS AND MACROMOLECULAR CROWDING IN CONDENSING DNA." Biophysical Reviews and Letters 02, no. 03n04 (2007): 259–65. http://dx.doi.org/10.1142/s1793048007000556.
Full textTAKAGI, Fumiko, and Syoji TAKADA. "Structure formation of proteins and "Molecular crowding" : Molecular dynamics simulation." Seibutsu Butsuri 41, supplement (2001): S175. http://dx.doi.org/10.2142/biophys.41.s175_4.
Full textSimoncik, Oliver, Vlastimil Tichy, Michal Durech, et al. "Direct activation of HSF1 by macromolecular crowding and misfolded proteins." PLOS ONE 19, no. 11 (2024): e0312524. http://dx.doi.org/10.1371/journal.pone.0312524.
Full textWojciechowski, M., and Marek Cieplak. "Effects of confinement and crowding on folding of model proteins." Biosystems 94, no. 3 (2008): 248–52. http://dx.doi.org/10.1016/j.biosystems.2008.06.016.
Full textArora, Simran, and Sri Rama Koti Ainavarapu. "Crowding-induced effects on the stability of ubiquitin-family proteins." Biophysical Journal 123, no. 3 (2024): 193a—194a. http://dx.doi.org/10.1016/j.bpj.2023.11.1242.
Full textSulmann, Stefan, Daniele Dell'Orco, Valerio Marino, Petra Behnen, and Karl-Wilhelm Koch. "Conformational Changes in Calcium-Sensor Proteins under Molecular Crowding Conditions." Chemistry - A European Journal 20, no. 22 (2014): 6756–62. http://dx.doi.org/10.1002/chem.201402146.
Full textŠimončík, Oliver, Vlastimil Tichý, Michal Ďurech, et al. "Direct activation of HSF1 by macromolecular crowding and misfolded proteins." PLos ONE 19, no. 11 (2024): e0312524. https://doi.org/10.1371/journal.pone.0312524.
Full textByun, Wan Gi, Jihye Lee, Seungtaek Kim, and Seung Bum Park. "Harnessing stress granule formation by small molecules to inhibit the cellular replication of SARS-CoV-2." Chemical Communications 57, no. 93 (2021): 12476–79. http://dx.doi.org/10.1039/d1cc05508a.
Full textShahid, Sumra, Ikramul Hasan, Faizan Ahmad, Md Imtaiyaz Hassan, and Asimul Islam. "Carbohydrate-Based Macromolecular Crowding-Induced Stabilization of Proteins: Towards Understanding the Significance of the Size of the Crowder." Biomolecules 9, no. 9 (2019): 477. http://dx.doi.org/10.3390/biom9090477.
Full textQin, Sanbo, and Huan-Xiang Zhou. "Effects of Macromolecular Crowding on the Conformational Ensembles of Disordered Proteins." Journal of Physical Chemistry Letters 4, no. 20 (2013): 3429–34. http://dx.doi.org/10.1021/jz401817x.
Full textCino, Elio A., Mikko Karttunen, and Wing-Yiu Choy. "Effects of Molecular Crowding on the Dynamics of Intrinsically Disordered Proteins." PLoS ONE 7, no. 11 (2012): e49876. http://dx.doi.org/10.1371/journal.pone.0049876.
Full textWei, Yuzhang, Isabel Mayoral-Delgado, Nicolas A. Stewart, and Marcus K. Dymond. "Macromolecular crowding and membrane binding proteins: The case of phospholipase A1." Chemistry and Physics of Lipids 218 (January 2019): 91–102. http://dx.doi.org/10.1016/j.chemphyslip.2018.12.006.
Full textLemetti, Laura, Sami-Pekka Hirvonen, Dmitrii Fedorov, et al. "Molecular crowding facilitates assembly of spidroin-like proteins through phase separation." European Polymer Journal 112 (March 2019): 539–46. http://dx.doi.org/10.1016/j.eurpolymj.2018.10.010.
Full textde Vries, Renko. "DNA condensation in bacteria: Interplay between macromolecular crowding and nucleoid proteins." Biochimie 92, no. 12 (2010): 1715–21. http://dx.doi.org/10.1016/j.biochi.2010.06.024.
Full textGupta, Munishwar Nath, and Vladimir N. Uversky. "Pre-Molten, Wet, and Dry Molten Globules en Route to the Functional State of Proteins." International Journal of Molecular Sciences 24, no. 3 (2023): 2424. http://dx.doi.org/10.3390/ijms24032424.
Full textIshimori, Koichiro. "Regulatory Mechanisms of Electron Transfer from Cytochrome C to Cytochrome C Oxidase Under Simulated Intracellular Conditions." ECS Meeting Abstracts MA2025-01, no. 17 (2025): 1244. https://doi.org/10.1149/ma2025-01171244mtgabs.
Full textGarner, M. M., and M. B. Burg. "Macromolecular crowding and confinement in cells exposed to hypertonicity." American Journal of Physiology-Cell Physiology 266, no. 4 (1994): C877—C892. http://dx.doi.org/10.1152/ajpcell.1994.266.4.c877.
Full textYang, Yin, Shen-Na Chen, Feng Yang, et al. "In-cell destabilization of a homodimeric protein complex detected by DEER spectroscopy." Proceedings of the National Academy of Sciences 117, no. 34 (2020): 20566–75. http://dx.doi.org/10.1073/pnas.2005779117.
Full textHöfig, Henning, Michele Cerminara, Ilona Ritter, et al. "Single-Molecule Studies on a FRET Biosensor: Lessons from a Comparison of Fluorescent Protein Equipped versus Dye-Labeled Species." Molecules 23, no. 12 (2018): 3105. http://dx.doi.org/10.3390/molecules23123105.
Full textBokvist, Marcus, and Gerhard Gröbner. "Misfolding of Amyloidogenic Proteins at Membrane Surfaces: The Impact of Macromolecular Crowding." Journal of the American Chemical Society 129, no. 48 (2007): 14848–49. http://dx.doi.org/10.1021/ja076059o.
Full textCheung, M. S., D. Klimov, and D. Thirumalai. "Molecular crowding enhances native state stability and refolding rates of globular proteins." Proceedings of the National Academy of Sciences 102, no. 13 (2005): 4753–58. http://dx.doi.org/10.1073/pnas.0409630102.
Full textHouser, Justin R., David J. Busch, David R. Bell, Brian Li, Pengyu Ren, and Jeanne C. Stachowiak. "The impact of physiological crowding on the diffusivity of membrane bound proteins." Soft Matter 12, no. 7 (2016): 2127–34. http://dx.doi.org/10.1039/c5sm02572a.
Full textRoman, Marisa I., Guoliang Yang, and Frank Ferrone. "Non Linear Effects of Macromolecular Crowding on the Mechanical Unfolding of Proteins." Biophysical Journal 104, no. 2 (2013): 566a. http://dx.doi.org/10.1016/j.bpj.2012.11.3138.
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