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Journal articles on the topic 'Pseudopalate'

Author: Grafiati

Published: 4 June 2021

Last updated: 15 February 2022

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1

Searl, Jeff, Paul Evitts, and William J. Davis. "Perceptual and acoustic evidence of speaker adaptation to a thin pseudopalate." Logopedics Phoniatrics Vocology 31, no. 3 (January 2006): 107–16. http://dx.doi.org/10.1080/14015430500390961.

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2

Zhang, Jian, Tianhu Zhao, Rongwen Yang, Ittipon Siridechakorn, Sanshan Wang, Qianqian Guo, Yingjie Bai, Hong C. Shen, and Xiaoguang Lei. "De novo synthesis, structural assignment and biological evaluation of pseudopaline, a metallophore produced by Pseudomonas aeruginosa." Chemical Science 10, no. 27 (2019): 6635–41. http://dx.doi.org/10.1039/c9sc01405e.

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3

Cullia, Gregorio, Roberto Fanelli, Romé Voulhoux, Pascal Arnoux, and Florine Cavelier. "Synthesis of Two Epimers of Pseudopaline." European Journal of Organic Chemistry 2020, no. 26 (July 2, 2020): 3975–80. http://dx.doi.org/10.1002/ejoc.202000278.

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4

Peralta-García, Edith, Edgar Caamal-Fuentes, Daniel Robledo, Emmanuel Hernández-Núñez, and Yolanda Freile-Pelegrín. "Lipid characterization of red algaRhodymenia pseudopalmata(Rhodymeniales, Rhodophyta)." Phycological Research 65, no. 1 (October 13, 2016): 58–68. http://dx.doi.org/10.1111/pre.12153.

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5

Kim, Kyeong Mi, Eun Chan Yang, Gangman Yi, and Hwan Su Yoon. "Complete mitochondrial genome of sublittoral macroalgaRhodymenia pseudopalmata(Rhodymeniales, Rhodophyta)." Mitochondrial DNA 25, no. 4 (June 21, 2013): 273–74. http://dx.doi.org/10.3109/19401736.2013.800501.

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6

Parker, William G., Axel Hungerbühler, and Jeffrey W. Martz. "The taxonomic status of the phytosaurs (Archosauriformes) Machaeroprosopus and Pseudopalatus from the Late Triassic of the western United States." Earth and Environmental Science Transactions of the Royal Society of Edinburgh 103, no. 3-4 (September 2012): 265–68. http://dx.doi.org/10.1017/s1755691013000339.

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ABSTRACTThe genus Machaeroprosopus has long been considered invalid because the type specimen of the Late Triassic phytosaur species, M. validus, has been lost. Re-examination of the primary literature regarding the establishment of the Late Triassic phytosaur genus Machaeroprosopus demonstrates that M. buceros is the correct type species, not M. validus. Thus, the genus level name Machaeroprosopus has priority over the genera Pseudopalatus and Arribasuchus and all nominal species should be reassigned. Reassignment of these species to Machaeroprosopus satisfies the requirements of the International Code of Zoological Nomenclature (ICZN) and preserves historical context. The name Pseudopalatinae is retained as the valid clade name for these phytosaurs because its usage falls outside of the ICZN.

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7

Pakker, Hans, Chantal Beekman, and Anneke Breeman. "Efficient photoreactivation of UVBR-induced DNA damage in the sublittoral macroalgaRhodymenia pseudopalmata(Rhodophyta)." European Journal of Phycology 35, no. 2 (May 2000): 109–14. http://dx.doi.org/10.1080/09670260010001735691.

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8

McFarlane, Jeffrey S., Jian Zhang, Sanshan Wang, Xiaoguang Lei, Graham R. Moran, and Audrey L. Lamb. "Staphylopine and pseudopaline dehydrogenase from bacterial pathogens catalyze reversible reactions and produce stereospecific metallophores." Journal of Biological Chemistry 294, no. 47 (October 15, 2019): 17988–8001. http://dx.doi.org/10.1074/jbc.ra119.011059.

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9

Hermansen, Grith Miriam Maigaard, Morten Lindqvist Hansen, Seyed Mohammad Hossein Khademi, and Lars Jelsbak. "Intergenic evolution during host adaptation increases expression of the metallophore pseudopaline in Pseudomonas aeruginosa." Microbiology 164, no. 8 (August 1, 2018): 1038–47. http://dx.doi.org/10.1099/mic.0.000687.

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10

Bedoux, Gilles, Edgar Caamal-Fuentes, Romain Boulho, Christel Marty, Nathalie Bourgougnon, Yolanda Freile-Pelegrín, and Daniel Robledo. "Antiviral and Cytotoxic Activities of Polysaccharides Extracted from Four Tropical Seaweed Species." Natural Product Communications 12, no. 6 (June 2017): 1934578X1701200. http://dx.doi.org/10.1177/1934578x1701200602.

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Polysaccharides extracted from Rhodymenia pseudopalmata, Solieria filiformis, Hydropuntia cornea (Rhodophyta) and Sargassum fluitans (Phaeophyceae) were evaluated for its cytotoxic and antiviral activities against Herpes simplex virus (HSV-Type 1). Chemical structures were characterized by FT-IR spectroscopy and 13C-NMR analyses. Polysaccharides from Sargassum fluitans (EC50 = 42.8 μg/ml) and Solieria filiformis (EC50 = 136.0 μg/ml) showed antiviral activity against herpes simplex virus type-I in vitro at a multiplicity of infection (MOI) of 0.01 ID50/cells without cytotoxicity (1–200 μg/mL). The activity observed suggests that sulphation, molecular weight and carbohydrate nature of these polysaccharides may be involved in this activity. To better understand the antiviral activity of the polysaccharides evaluated, it seems important to study the mechanism of action involved. These polysaccharides could be studied further to evaluate their potential use as antiviral drugs.

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11

Martz, Jeffrey, James Kirkland, Andrew Milner, William Parker, and Vincent Santucci. "Upper Triassic lithostratigraphy, depositional systems, and vertebrate paleontology across southern Utah." Geology of the Intermountain West 4 (April 21, 2017): 99–180. http://dx.doi.org/10.31711/giw.v4.pp99-180.

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The Chinle Formation and the lower part of the overlying Wingate Sandstone and Moenave Formation were deposited in fluvial, lacustrine, paludal, and eolian environments during the Norian and Rhaetian stages of the Late Triassic (~230 to 201.3 Ma), during which time the climate shifted from subtropical to increasingly arid. In southern Utah, the Shinarump Member was largely confined to pre-Chinle paleovalleys and usually overprinted by mottled strata. From southeastern to southwestern Utah, the lower members of the Chinle Formation (Cameron Member and correlative Monitor Butte Member) thicken dramatically whereas the upper members of the Chinle Formation (the Moss Back, Petrified Forest, Owl Rock, and Church Rock Members) become erosionally truncated; south of Moab, the Kane Springs beds are laterally correlative with the Owl Rock Member and uppermost Petrified Forest Member. Prior to the erosional truncation of the upper members, the Chinle Formation was probably thickest in a southeast to northwest trend between Petrified Forest National Park and the Zion National Park, and thinned to the northeast due to the lower Chinle Formation lensing out against the flanks of the Ancestral Rocky Mountains, where the thickness of the Chinle is largely controlled by syndepositional salt tectonism. The Gartra and Stanaker Members of the Ankareh Formation are poorly understood Chinle Formation correlatives north of the San Rafael Swell. Osteichthyan fish, metoposaurid temnospondyls, phytosaurids, and crocodylomorphs are known throughout the Chinle Formation, although most remains are fragmentary. In the Cameron and Monitor Butte Members, metoposaurids are abundant and non-pseudopalatine phytosaurs are known, as is excellent material of the paracrocodylomorph Poposaurus; fragmentary specimens of the aetosaurs Calyptosuchus, Desmatosuchus, and indeterminate paratypothoracisins were probably also recovered from these beds. Osteichthyans, pseudopalatine phytosaurs, and the aetosaur Typothorax are especially abundant in the Kane Springs beds and Church Rock Member of Lisbon Valley, and Typothorax is also known from the Petrified Forest Member in Capitol Reef National Park. Procolophonids, doswelliids, and dinosaurs are known but extremely rare in the Chinle Formation of Utah. Body fossils and tracks of osteichthyans, therapsids, crocodylomorphs, and theropods are well known from the lowermost Wingate Sandstone and Moenave Formation, especially from the St. George Dinosaur Discovery Site at Johnson Farm.

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12

Martz, Jeffrey W., James I. Kirkland, Andrew R. C. Milner, William G. Parker, and Vincent L. Santucci. "Upper Triassic lithostratigraphy, depositional systems, and vertebrate paleontology across southern Utah." Geology of the Intermountain West 4 (August 2, 2017): 99–180. http://dx.doi.org/10.31711/giw.v4i0.13.

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The Chinle Formation and the lower part of the overlying Wingate Sandstone and Moenave Formation were deposited in fluvial, lacustrine, paludal, and eolian environments during the Norian and Rhaetian stages of the Late Triassic (~230 to 201.3 Ma), during which time the climate shifted from subtropical to increasingly arid. In southern Utah, the Shinarump Member was largely confined to pre-Chinle paleovalleys and usually overprinted by mottled strata. From southeastern to southwestern Utah, the lower members of the Chinle Formation (Cameron Member and correlative Monitor Butte Member) thicken dramatically whereas the upper members of the Chinle Formation (the Moss Back, Petrified Forest, Owl Rock, and Church Rock Members) become erosionally truncated; south of Moab, the Kane Springs beds are laterally correlative with the Owl Rock Member and uppermost Petrified Forest Member. Prior to the erosional truncation of the upper members, the Chinle Formation was probably thickest in a southeast to northwest trend between Petrified Forest National Park and the Zion National Park, and thinned to the northeast due to the lower Chinle Formation lensing out against the flanks of the Ancestral Rocky Mountains, where the thickness of the Chinle is largely controlled by syndepositional salt tectonism. The Gartra and Stanaker Members of the Ankareh Formation are poorly understood Chinle Formation correlatives north of the San Rafael Swell. Osteichthyan fish, metoposaurid temnospondyls, phytosaurids, and crocodylomorphs are known throughout the Chinle Formation, although most remains are fragmentary. In the Cameron and Monitor Butte Members, metoposaurids are abundant and non-pseudopalatine phytosaurs are known, as is excellent material of the paracrocodylomorph Poposaurus; fragmentary specimens of the aetosaurs Calyptosuchus, Desmatosuchus, and indeterminate paratypothoracisins were probably also recovered from these beds. Osteichthyans, pseudopalatine phytosaurs, and the aetosaur Typothorax are especially abundant in the Kane Springs beds and Church Rock Member of Lisbon Valley, and Typothorax is also known from the Petrified Forest Member in Capitol Reef National Park. Procolophonids, doswelliids, and dinosaurs are known but extremely rare in the Chinle Formation of Utah. Body fossils and tracks of osteichthyans, therapsids, crocodylomorphs, and theropods are well known from the lowermost Wingate Sandstone and Moenave Formation, especially from the St. George Dinosaur Discovery Site at Johnson Farm.

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13

Ghssein, Ghassan, and Samir Matar. "Chelating Mechanisms of Transition Metals by Bacterial Metallophores “Pseudopaline and Staphylopine”: A Quantum Chemical Assessment." Computation 6, no. 4 (October 31, 2018): 56. http://dx.doi.org/10.3390/computation6040056.

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In bacterial pathology, metallophores fabricated by bacteria such as Staphylococcus aureus and Pseudomonas aeruginosa are exported to surrounding physiological media via a specific process to sequester and import metals, resulting in enhanced virulence of the bacteria. While these mechanisms are understood at qualitative levels, our investigation presents a complementary original view based on quantum chemical computations. Further understanding of the active centers in particular was provided for pseudopaline and staphylopine metallophores, which were described chemically and with vibration spectroscopy. Then, for complexes formed with a range of transition metal divalent ions (Ni, Cu, and Zn), description and analyses of the frontier molecular orbitals (FMOs) are provided, highlighting a mechanism of metal-to-ligand charge transfer (MLCT), based on excited-states calculations (time-dependent density functional theory (TD-DFT)) at the basis of the delivery of the metallic ionic species to the bacterial medium, leading eventually to its enhanced virulence. Such investigation gains importance especially in view of stepwise syntheses of metallophores in the laboratory, providing significant progress in the understanding of mechanisms underlying the enhancement of bacterial pathologies.

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14

Joyce, Walter G., Virginie S. Volpato, and Yann Rollot. "The skull of the carettochelyid turtle <i>Anosteira</i> <i>pulchra</i> from the Eocene (Uintan) of Wyoming and the carotid canal system of carettochelyid turtles." Fossil Record 21, no. 2 (December 13, 2018): 301–10. http://dx.doi.org/10.5194/fr-21-301-2018.

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Abstract. Here we document the morphology of the only known skull of a carettochelyid turtle from North America. The specimen originates from the middle Eocene (early Uintan) Washakie Formation of Sweetwater County, Wyoming, and is referred to Anosteira pulchra based on temporal considerations. The skull of Anosteira pulchra broadly corresponds in its morphology to that of other carettochelyids but exhibits numerous differences that are related to it being more gracile. As a meaningful outgroup is lacking, it is not possible to determine if the gracile morphology seen in this taxon is apomorphic or plesiomorphic for the Anosteira–Allaeochelys clade. Anosteira pulchra and Carettochelys insculpta lack an ossified palatine canal. We conclude by reference to extant trionychids that the palatine (mandibular) canal is likely present but branches from the cerebral (pseudopalatine) canal following its exit from the sella turcica. As in trionychids, the vidian branch of the facial nerve (VII) of Anosteira pulchra and Carettochelys insculpta mostly traverses the palatine.

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15

Pliego-Cortés, Hugo, Edgar Caamal-Fuentes, Jorge Montero-Muñoz, Yolanda Freile-Pelegrín, and Daniel Robledo. "Growth, biochemical and antioxidant content of Rhodymenia pseudopalmata (Rhodymeniales, Rhodophyta) cultivated under salinity and irradiance treatments." Journal of Applied Phycology 29, no. 5 (March 6, 2017): 2595–603. http://dx.doi.org/10.1007/s10811-017-1085-7.

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16

Gauna, M. Cecilia, Elisa R. Parodi, and Eduardo J. CÃ¡ceres. "Epiphytic relationships of Pseudendoclonium submarinum Wille (Ulvophyceae) and Rhodymenia pseudopalmata (Rhodophyta) from the Patagonian coast of Argentina." Phycological Research 57, no. 4 (December 2009): 313–22. http://dx.doi.org/10.1111/j.1440-1835.2009.00551.x.

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17

McFarlane, Jeffrey S., Cara L. Davis, and Audrey L. Lamb. "Staphylopine, pseudopaline, and yersinopine dehydrogenases: A structural and kinetic analysis of a new functional class of opine dehydrogenase." Journal of Biological Chemistry 293, no. 21 (April 4, 2018): 8009–19. http://dx.doi.org/10.1074/jbc.ra118.002007.

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Opine dehydrogenases (ODHs) from the bacterial pathogens Staphylococcus aureus, Pseudomonas aeruginosa, and Yersinia pestis perform the final enzymatic step in the biosynthesis of a new class of opine metallophores, which includes staphylopine, pseudopaline, and yersinopine, respectively. Growing evidence indicates an important role for this pathway in metal acquisition and virulence, including in lung and burn-wound infections (P. aeruginosa) and in blood and heart infections (S. aureus). Here, we present kinetic and structural characterizations of these three opine dehydrogenases. A steady-state kinetic analysis revealed that the three enzymes differ in α-keto acid and NAD(P)H substrate specificity and nicotianamine-like substrate stereoselectivity. The structural basis for these differences was determined from five ODH X-ray crystal structures, ranging in resolution from 1.9 to 2.5 Å, with or without NADP+ bound. Variation in hydrogen bonding with NADPH suggested an explanation for the differential recognition of this substrate by these three enzymes. Our analysis further revealed candidate residues in the active sites required for binding of the α-keto acid and nicotianamine-like substrates and for catalysis. This work reports the first structural kinetic analyses of enzymes involved in opine metallophore biosynthesis in three important bacterial pathogens of humans.

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18

Asih, Triana, Muhammad Khayuridlo, Rasuane Noor, and Muhfahroyin Muhfahroyin. "Biodiversity and Potential Use of Macro Algae in Pesisir Barat Lampung." Biosaintifika: Journal of Biology & Biology Education 11, no. 1 (April 1, 2019): 100–107. http://dx.doi.org/10.15294/biosaintifika.v11i1.16532.

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Pesisir Barat Regency in Lampung has abundant marine biological wealth that has not been widely known and utilized by the community, one of them is macro algae. The objectives of the research were to identify the types of macro algae and to explains the potential use of macro algae in the Pesisir Barat Lampung Region. The study used cruise method. The findings were identified by experts to validate the results of classification, morphology, and qualitative studies regarding the potential use and benefits of macro algae. From the results of this study, 15 species of macro algae were found on Tanjung Setia Beach included; 3 species of green algae (Chlorophyta) consist of Halimeda opuntia L., Caulerpa racemosa F., Ulva lactuca L .; 7 species of brown algae (Phaeophyta) consist of Padina pavonica L., Padina australis H., Sargassum vulgare C.A., Sargassum polycystum C.A., Turbinaria ornata J.A., Turbinaria ornata J.A., Fucus vesiculosus L.; and 5 species of red algae (Rhodophyta), consist of Corallina officinalis L., Gigartina pistilla S., Gigartina disticha S., Gracilaria verrucosa, H., Rhodymenia pseudopalmat J.V.L.The benefits of this research for society to provide insight into the potential use of macro algae which can be utilized in many fields. For students, provide information on the biodiversity of macro algae in the sea.

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19

Laffont, Clémentine, Catherine Brutesco, Christine Hajjar, Gregorio Cullia, Roberto Fanelli, Laurent Ouerdane, Florine Cavelier, and Pascal Arnoux. "Simple rules govern the diversity of bacterial nicotianamine-like metallophores." Biochemical Journal 476, no. 15 (August 9, 2019): 2221–33. http://dx.doi.org/10.1042/bcj20190384.

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Abstract In metal-scarce environments, some pathogenic bacteria produce opine-type metallophores mainly to face the host's nutritional immunity. This is the case of staphylopine, pseudopaline and yersinopine, identified in Staphylococcus aureus, Pseudomonas aeruginosa and Yersinia pestis, respectively. Depending on the species, these metallophores are synthesized by two (CntLM) or three enzymes (CntKLM), CntM catalyzing the last step of biosynthesis using diverse substrates (pyruvate or α-ketoglutarate), pathway intermediates (xNA or yNA) and cofactors (NADH or NADPH). Here, we explored the substrate specificity of CntM by combining bioinformatic and structural analysis with chemical synthesis and enzymatic studies. We found that NAD(P)H selectivity is mainly due to the amino acid at position 33 (S. aureus numbering) which ensures a preferential binding to NADPH when it is an arginine. Moreover, whereas CntM from P. aeruginosa preferentially uses yNA over xNA, the staphylococcal enzyme is not stereospecific. Most importantly, selectivity toward α-ketoacids is largely governed by a single residue at position 150 of CntM (S. aureus numbering): an aspartate at this position ensures selectivity toward pyruvate, whereas an alanine leads to the consumption of both pyruvate and α-ketoglutarate. Modifying this residue in P. aeruginosa led to a complete reversal of selectivity. Thus, the diversity of opine-type metallophore is governed by the absence/presence of a cntK gene encoding a histidine racemase, and the amino acid residue at position 150 of CntM. These two simple rules predict the production of a fourth metallophore by Paenibacillus mucilaginosus, which was confirmed in vitro and called bacillopaline.

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20

Pliego-Cortés, Hugo, Gilles Bedoux, Romain Boulho, Laure Taupin, Yolanda Freile-Pelegrín, Nathalie Bourgougnon, and Daniel Robledo. "Stress tolerance and photoadaptation to solar radiation in Rhodymenia pseudopalmata (Rhodophyta) through mycosporine-like amino acids, phenolic compounds, and pigments in an Integrated Multi-Trophic Aquaculture system." Algal Research 41 (August 2019): 101542. http://dx.doi.org/10.1016/j.algal.2019.101542.

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21

RAYFIELD, E. J., P. M. BARRETT, R. A. McDONNELL, and K. J. WILLIS. "A Geographical Information System (GIS) study of Triassic vertebrate biochronology." Geological Magazine 142, no. 4 (July 2005): 327–54. http://dx.doi.org/10.1017/s001675680500083x.

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Geographical Information Systems (GIS) have been applied extensively to analyse spatial data relating to varied environmental issues, but have not so far been used to address biostratigraphical or macroevolutionary questions over extended spatial and temporal scales. Here, we use GIS techniques to test the stability, validity and utility of proposed Middle and Late Triassic ‘Land Vertebrate Faunachrons’ (LVFs), a global biostratigraphical framework based upon terrestrial/freshwater tetrapod occurrences. A database of tetrapod and megafloral localities was constructed for North America and Western Europe that also incorporated information on relevant palaeoenvironmental variables. This database was subjected to various spatial analysis techniques. Our GIS analysis found support at a global level for Eocyclotosaurus as an Anisian index taxon and probably Aetosaurus as a Norian indicator. Other tetrapod taxa are useful biostratigraphical/biochronological markers on a regional basis, such as Longosuchus and Doswellia for Late Carnian time. Other potential index fossils are hampered, however, by taxonomic instability (Mastodonsaurus, Metoposaurus, Typothorax, Paleorhinus, Pseudopalatus, Redondasaurus, Redondasuchus) and/or are not clearly restricted in temporal distribution (Paleorhinus, Angistorhinus, Stagonolepis, Metoposaurus and Rutiodon). This leads to instability in LVF diagnosis. We found only in the western Northern Hemisphere is there some evidence for an Anisian–Ladinian biochronological unit amalgamating the Perovkan and Berdyankian LVFs, and a possible late Carnian unit integrating the Otischalkian and Adamanian.Megaplants are generally not useful for biostratigraphical correlation in the Middle and Upper Triassic of the study area, but there is some evidence for a Carnian-age floral assemblage that corresponds to the combined Otischalkian and Adamanian LVFs. Environmental biases do not appear to strongly affect the spatial distribution of either the tetrapods or megaplants that have been proposed as index taxa in biostratigraphical schemes, though several examples of apparent environmental bias were detected by the analysis. Consequently, we argue that further revision and refinement of Middle and Late Triassic LVFs is needed before they can be used to support global or multi-regional biostratigraphical correlations. Caution should therefore be exercised when using the current scheme as a platform for macroevolutionary or palaeoecological hypotheses. Finally, this study demonstrates the potential of GIS as a powerful tool for tackling palaeontological questions over extended timescales.

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22

Gauna, M. Cecilia, Elisa R. Parodi, and Eduardo J. Caceres. "The Occurrence of Laminarionema elsbetiae (Phaeophyceae) on Rhodymenia pseudopalmata (Rhodophyta) from the Patagonian Coasts of Argentina: Characteristics of the Relationship in Natural and Experimental Infections, and Morphology of the Epi-endophyte in Unialgal Free Cultures." ALGAE 24, no. 4 (December 1, 2009): 249–56. http://dx.doi.org/10.4490/algae.2009.24.4.249.

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23

Zhao, Tianhu, Jian Zhang, Xiaowan Han, Jun Yang, Xin Wang, Maarten Vercruysse, Hai-Yu Hu, and Xiaoguang Lei. "A Pseudopaline Fluorescent Probe for the Selective Detection of Pseudomonas aeruginosa." CCS Chemistry, November 18, 2020, 2405–17. http://dx.doi.org/10.31635/ccschem.020.202000517.

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24

Lhospice, Sébastien, Nicolas Oswaldo Gomez, Laurent Ouerdane, Catherine Brutesco, Ghassan Ghssein, Christine Hajjar, Ahmed Liratni, et al. "Pseudomonas aeruginosa zinc uptake in chelating environment is primarily mediated by the metallophore pseudopaline." Scientific Reports 7, no. 1 (December 2017). http://dx.doi.org/10.1038/s41598-017-16765-9.

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25

Gomez, Nicolas Oswaldo, Alexandre Tetard, Laurent Ouerdane, Clémentine Laffont, Catherine Brutesco, Geneviève Ball, Ryszard Lobinski, et al. "Involvement of the Pseudomonas aeruginosa MexAB–OprM efflux pump in the secretion of the metallophore pseudopaline." Molecular Microbiology, September 23, 2020. http://dx.doi.org/10.1111/mmi.14600.

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26

Semesis, K., and C. J. Dawes. "Chemical Composition, Yield, and Quality of a Phycocolloid from the Red Alga Rhodymenia pseudopalmata (Lam.) Silva." Botanica Marina 29, no. 1 (1986). http://dx.doi.org/10.1515/botm.1986.29.1.83.

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