Relevant bibliographies by topics / PufM gene

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  1. Journal articles
  2. Dissertations / Theses
  3. Books
  4. Book chapters
  5. Conference papers

Academic literature on the topic 'PufM gene'

Author: Grafiati
Published: 2 June 2025
Last updated: 31 July 2025

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Journal articles on the topic "PufM gene"

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Salka, Ivette, Vladimíra Moulisová, Michal Koblížek, Günter Jost, Klaus Jürgens, and Matthias Labrenz. "Abundance, Depth Distribution, and Composition of Aerobic Bacteriochlorophyll a-Producing Bacteria in Four Basins of the Central Baltic Sea." Applied and Environmental Microbiology 74, no. 14 (2008): 4398–404. http://dx.doi.org/10.1128/aem.02447-07.

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ABSTRACT The abundance, vertical distribution, and diversity of aerobic anoxygenic phototrophic bacteria (AAP) were studied at four basins of the Baltic Sea. AAP were enumerated by infrared epifluorescence microscopy, and their diversity was analyzed by using pufM gene clone libraries. In addition, numbers of CFU containing the pufM gene were determined, and representative strains were isolated. Both approaches indicated that AAP reached maximal abundance in the euphotic zone. Maximal AAP abundance was 2.5 × 105 cells ml−1 (11% of total prokaryotes) or 1.0 × 103 CFU ml−1 (9 to 10% of total CFU
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Waidner, Lisa A., and David L. Kirchman. "Diversity and Distribution of Ecotypes of the Aerobic Anoxygenic Phototrophy Gene pufM in the Delaware Estuary." Applied and Environmental Microbiology 74, no. 13 (2008): 4012–21. http://dx.doi.org/10.1128/aem.02324-07.

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ABSTRACT The diversity of aerobic anoxygenic phototrophic (AAP) bacteria has been examined in marine habitats, but the types of AAP bacteria in estuarine waters and distribution of ecotypes in any environment are not well known. The goal of this study was to determine the diversity of AAP bacteria in the Delaware estuary and to examine the distribution of select ecotypes using quantitative PCR (qPCR) assays for the pufM gene, which encodes a protein in the light reaction center of AAP bacteria. In PCR libraries from the Delaware River, pufM genes similar to those from Beta- (Rhodoferax-like) o
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Achenbach, Laurie A., Jennifer Carey, and Michael T. Madigan. "Photosynthetic and Phylogenetic Primers for Detection of Anoxygenic Phototrophs in Natural Environments." Applied and Environmental Microbiology 67, no. 7 (2001): 2922–26. http://dx.doi.org/10.1128/aem.67.7.2922-2926.2001.

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ABSTRACT Primer sets were designed to target specific 16S ribosomal DNA (rDNA) sequences of photosynthetic bacteria, including the green sulfur bacteria, the green nonsulfur bacteria, and the members of theHeliobacteriaceae (a gram-positive phylum). Due to the phylogenetic diversity of purple sulfur and purple nonsulfur phototrophs, the 16S rDNA gene was not an appropriate target for phylogenetic rDNA primers. Thus, a primer set was designed that targets the pufM gene, encoding the M subunit of the photosynthetic reaction center, which is universally distributed among purple phototrophic bacte
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Karr, Elizabeth A., W. Matthew Sattley, Deborah O. Jung, Michael T. Madigan, and Laurie A. Achenbach. "Remarkable Diversity of Phototrophic Purple Bacteria in a Permanently Frozen Antarctic Lake." Applied and Environmental Microbiology 69, no. 8 (2003): 4910–14. http://dx.doi.org/10.1128/aem.69.8.4910-4914.2003.

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ABSTRACT Although anoxygenic photosynthesis is thought to play an important role in the primary productivity of permanently frozen lakes in the Antarctic dry valleys, the bacterial communities responsible for this metabolism remain uncharacterized. Here we report the composition and activity of phototrophic purple bacteria in Lake Fryxell, Antarctica, as determined by analysis of a photosynthesis-specific gene, pufM. The results revealed an extensive diversity and highly stratified distribution of purple nonsulfur bacteria in Lake Fryxell and showed which phylotypes produced pufM transcripts i
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Jeanthon, C., D. Boeuf, O. Dahan, et al. "Diversity of cultivated and metabolically active aerobic anoxygenic phototrophic bacteria along an oligotrophic gradient in the Mediterranean Sea." Biogeosciences Discussions 8, no. 3 (2011): 4421–57. http://dx.doi.org/10.5194/bgd-8-4421-2011.

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Abstract. Aerobic anoxygenic phototrophic (AAP) bacteria play significant roles in the bacterioplankton productivity and biogeochemical cycles of the surface ocean. In this study, we applied both cultivation and mRNA-based molecular methods to explore the diversity of AAP bacteria along an oligotrophic gradient in the Mediterranean Sea in early summer 2008. Colony-forming units obtained on three different agar media were screened for the production of bacteriochlorophyll-a (BChl-a), the light-harvesting pigment of AAP bacteria. BChl-a-containing colonies represented a low part of the cultivabl
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Jeanthon, C., D. Boeuf, O. Dahan, et al. "Diversity of cultivated and metabolically active aerobic anoxygenic phototrophic bacteria along an oligotrophic gradient in the Mediterranean Sea." Biogeosciences 8, no. 7 (2011): 1955–70. http://dx.doi.org/10.5194/bg-8-1955-2011.

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Abstract. Aerobic anoxygenic phototrophic (AAP) bacteria play significant roles in the bacterioplankton productivity and biogeochemical cycles of the surface ocean. In this study, we applied both cultivation and mRNA-based molecular methods to explore the diversity of AAP bacteria along an oligotrophic gradient in the Mediterranean Sea in early summer 2008. Colony-forming units obtained on three different agar media were screened for the production of bacteriochlorophyll-a (BChl-a), the light-harvesting pigment of AAP bacteria. BChl-a-containing colonies represented a low part of the cultivabl
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Albuquerque, Luciana, João Santos, Pedro Travassos, et al. "Albidovulum inexpectatum gen. nov., sp. nov., a Nonphotosynthetic and Slightly Thermophilic Bacterium from a Marine Hot Spring That Is Very Closely Related to Members of the Photosynthetic Genus Rhodovulum." Applied and Environmental Microbiology 68, no. 9 (2002): 4266–73. http://dx.doi.org/10.1128/aem.68.9.4266-4273.2002.

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ABSTRACT Several bacterial isolates, with an optimum growth temperature of about 50°C, were recovered from the marine hot spring at Ferraria on the island of São Miguel in the Azores. The geothermal water emerged from a porous lava flow and rapidly cooled in contact with seawater except at low tide. The bacterial species represented by strains FRR-10T and FRR-11 was nonpigmented, strictly aerobic, and organotrophic. Several genes, bchZ, pufB, pufA, pufL, or pufM, encoding the photosynthetic reaction center proteins and the core light-harvesting complexes were not detected in these strains. Th
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Oz, Aia, Gazalah Sabehi, Michal Kobl�zek, Ramon Massana, and Oded B�j�. "Roseobacter-Like Bacteria in Red and Mediterranean Sea Aerobic Anoxygenic Photosynthetic Populations." Applied and Environmental Microbiology 71, no. 1 (2005): 344–53. http://dx.doi.org/10.1128/aem.71.1.344-353.2005.

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ABSTRACT Bacteriochlorophyll a-containing aerobic anoxygenic phototrophs (AAnP) have been proposed to account for up to 11% of the total surface water microbial community and to potentially have great ecological importance in the world's oceans. Recently, environmental and genomic data based on analysis of the pufM gene identified the existence of α-proteobacteria as well as possible γ-like proteobacteria among AAnP in the Pacific Ocean. Here we report on analyses of environmental samples from the Red and Mediterranean Seas by using pufM as well as the bchX and bchL genes as molecular markers.
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Hiraishi, Akira, Nobuyoshi Nagao, Chinatsu Yonekawa, et al. "Distribution of Phototrophic Purple Nonsulfur Bacteria in Massive Blooms in Coastal and Wastewater Ditch Environments." Microorganisms 8, no. 2 (2020): 150. http://dx.doi.org/10.3390/microorganisms8020150.

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The biodiversity of phototrophic purple nonsulfur bacteria (PNSB) in comparison with purple sulfur bacteria (PSB) in colored blooms and microbial mats that developed in coastal mudflats and pools and wastewater ditches was investigated. For this, a combination of photopigment and quinone profiling, pufM gene-targeted quantitative PCR, and pufM gene clone library analysis was used in addition to conventional microscopic and cultivation methods. Red and pink blooms in the coastal environments contained PSB as the major populations, and smaller but significant densities of PNSB, with members of R
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Zeng, Yinxin, Peiyan Dong, Zongyun Qiao, and Tianling Zheng. "Diversity of the aerobic anoxygenic phototrophy gene pufM in Arctic and Antarctic coastal seawaters." Acta Oceanologica Sinica 35, no. 6 (2016): 68–77. http://dx.doi.org/10.1007/s13131-016-0877-y.

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Dissertations / Theses on the topic "PufM gene"

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Lilburn, Timothy George. "The role of the pufX gene product of Rhodobacter capsulatus." Thesis, University of British Columbia, 1990. http://hdl.handle.net/2429/30079.

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The 2.7 kilobase transcript of the puf operon of the photosynthetic bacterium Rhodobacter capsulatus has five open reading frames. The gene products of four of these open reading frames (pufB, A, L,and M) are well characterized as structural polypeptides of the reaction center (pufL and M) and the B870 light-harvesting antenna complex (pufB and A), The role of the pufX gene product has been unknown. By deleting the pufX gene from a plasmid carrying the puf operon and using this plasmid to reconstitute a strain of R. capsulatus which had the puf operon deleted, it was possible to characterize t
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Borgeaud, Olivier. "Être bourgeois dans le vignoble du Jura au XIXè siècle." Electronic Thesis or Diss., Lyon, 2021. https://books.openedition.org/pufc/51708.

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Alors que la France est largement rurale au XIXe siècle, l’historiographie a négligé l’observation de la bourgeoisie des villages qui se distingue d’une bourgeoisie des villes amplement explorée. A partir de sources publiques et privées, et particulièrement plusieurs fonds importants de correspondances, cette recherche permet d’approcher toutes les facettes de la famille bourgeoise qui vit à l’année à la campagne. Plus que par son appartenance à un groupe social, c’est par sa position au sein de la société rurale que se définit le bourgeois rural, dans un temps long et selon un ordre social en
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Amrein, Kurt Eduard. "Charakterisierung eines Gens von Chironomus tentans aus dem 20-OH-Ecdyson regulierten Puff I-18C /." [S.l.] : [s.n.], 1986. http://e-collection.ethbib.ethz.ch/show?type=diss&nr=8068.

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Lublin, Alex Louis. "The pumilio proteins PUF-5 and PUF-6/7/10 are necessary for repression of C. Elegans notch/glp-1 during late oogenesis (or not all that glitters is GLD-1) /." Connect to full text at ProQuest Digital Dissertations. IP filtered, 2005.

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Thesis (Ph.D. in Cell and Developmental Biology) -- University of Colorado at Denver and Health Sciences Center, 2005.<br>Typescript. Includes bibliographical references (leaves 82-86). Free to UCDHSC affiliates. Online version available via ProQuest Digital Dissertations;
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Siviero, Fábio. "Sequenciamento e análise de um banco de cDNA de glândulas salivares de Rhynchosciara americana e caracterização do gene RaDup." Universidade de São Paulo, 2004. http://www.teses.usp.br/teses/disponiveis/46/46131/tde-28112008-091425/.

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Durante o desenvolvimento deste projeto adotou-se como estratégia o sequenciamento de ESTs, com a finalidade de encontrar mensagens relacionadas com desenvolvimento, metabolismo e principalmente amplificação/politenização em glândulas salivares de Rhynchosciara americana, um díptero (Sciarídeo) que apresenta cromossomos politênicos e amplificação gênica rigidamente regulada ao longo do desenvolvimento larval, tanto neste tecido quanto em outros. Um total de 8193 ESTs foi gerado, estas foram anotadas e categorizadas segundo os termos do Gene Ontology Consortium, proporcionando uma visão geral d
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Marucha, Kevin [Verfasser], and Christine [Akademischer Betreuer] Clayton. "The suppressive role of 4EIP and PUF3 in gene expression during differentiation of Trypanosoma brucei / Kevin Marucha ; Betreuer: Christine Clayton." Heidelberg : Universitätsbibliothek Heidelberg, 2019. http://d-nb.info/1177045559/34.

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Lutz, Beat. "Studies on the heat shock response of a gene from the early ecdysterone-inducible puff site 1-18C of Chironomus tentans /." Zürich, 1989. http://e-collection.ethbib.ethz.ch/show?type=diss&nr=8835.

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De, Rosa Maria Caterina. "Studio dell’espressione di geni coinvolti in pathways metabolici regolati da nutrienti." Doctoral thesis, Universita degli studi di Salerno, 2015. http://hdl.handle.net/10556/1864.

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2014-2015<br>Il profilo sierico, con particolare riferimento ai livelli di biomarkers, rappresenta uno strumento efficace ed affidabile per la diagnosi di malattie metaboliche, come il diabete o le malattie cardiovascolari. La composizione del siero è influenzata sia dal metabolismo endogeno che dall’apporto nutrizionale. In effetti, lo stile alimentare, con particolare riferimento alla qualità e alla quantità dell’apporto nutrizionale, può fortemente influenzare il rischio e la progressione di malattia, poiché alcuni nutrienti agiscono come composti bioattivi. A questo proposito, la let
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Dias, Ana Christina de Oliveira. "Express?o dos genes COX-2 e HER-3 em c?ncer de pulm?o por PCR em tempo real." Pontif?cia Universidade Cat?lica do Rio Grande do Sul, 2008. http://tede2.pucrs.br/tede2/handle/tede/1537.

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Made available in DSpace on 2015-04-14T13:34:46Z (GMT). No. of bitstreams: 1 417743.pdf: 759580 bytes, checksum: ccd92c57b296af06000f651f2b61a773 (MD5) Previous issue date: 2008-12-22<br>O c?ncer de pulm?o ? o mais comum entre os tumores malignos, apresentando um aumento de 2% na sua incid?ncia anual mundial. No Brasil, o c?ncer de pulm?o foi respons?vel por 14.715 ?bitos em 2000 e as estimativas de incid?ncia de c?ncer de pulm?o em 2008 dever? atingir 27.270 pessoas (17.810 homens e 9.460 mulheres). Este estudo analisa quantitativamente, pela t?cnica da PCR em tempo real, a express?o de doi
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Ouchane, Soufian. "Organisation et expression des genes puf et crt de la bacterie pourpre rubrivivax gelatinosus. Role photoprotecteur des carotenoides." Paris 11, 1997. http://www.theses.fr/1997PA112127.

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Notre premier travail a concerne l'isolement et la caracterisation d'un mutant resistant a un herbicide montrant l'implication du residu gly 192 de la sous-unite l du centre reactionnel dans la liaison avec cet herbicide. Ensuite nous avons mis au point deux modes de transfert genetique puis construit une souche deletee de l'operon puf codant pour les sous-unites du centre reactionnel et de l'antenne lhi. L'implication du residu gly 192 dans la liaison a l'herbicide a ete confirmee par complementation. Par ailleurs, la caracterisation de la souche deletee et des souches d'insertions a permis d
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Books on the topic "PufM gene"

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Maj, Dorota. Modyfikujący wpływ roślinnych dodatków paszowych na użytkowość mięsną i ekspresję wybranych genów u królików w zależności od wieku i płci. Publishing House of the University of Agriculture in Krakow, 2017. http://dx.doi.org/10.15576/978-83-66602-29-8.

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The aim of the study was to determine the effect of feed additives (algae, soybean, and sunflower oil) used in the rabbit feed on: growth indices and slaughter traits, pH, colour, texture, chemical composition, fatty acid profile and oxidative stability (TBARS) of the meat as well as FTO and FABP4 genes expression in the meat’s intramuscular fat (m. longissimus lumborum), depending on the age and sex. The experimental material consisted of Termond White rabbits (n = 160, 80 females and 80 males). Animals were weaned on the 35th day of life, and housed in metal cages arranged in batteries (4 ra
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Skiba, Grzegorz. Fizjologiczne, żywieniowe i genetyczne uwarunkowania właściwości kości rosnących świń. The Kielanowski Institute of Animal Physiology and Nutrition, Polish Academy of Sciences, 2020. http://dx.doi.org/10.22358/mono_gs_2020.

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Bones are multifunctional passive organs of movement that supports soft tissue and directly attached muscles. They also protect internal organs and are a reserve of calcium, phosphorus and magnesium. Each bone is covered with periosteum, and the adjacent bone surfaces are covered by articular cartilage. Histologically, the bone is an organ composed of many different tissues. The main component is bone tissue (cortical and spongy) composed of a set of bone cells and intercellular substance (mineral and organic), it also contains fat, hematopoietic (bone marrow) and cartilaginous tissue. Bones a
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Book chapters on the topic "PufM gene"

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Bauer, Carl E., Marianne Eleuterio, Debra A. Young, and Barry L. Marrs. "Analysis of Transcription Through the Rhodobacter Capsulatus puf Operon Using a Translational Fusion of pufM to the E. Coli LacZ Gene." In Progress in Photosynthesis Research. Springer Netherlands, 1987. http://dx.doi.org/10.1007/978-94-017-0519-6_145.

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Klug, Gabriele, and Stanley N. Cohen. "Degradation of puf mRNA in Rhodobacter Capsulatus and its Role in the Regulation of Gene Expression." In Post-Transcriptional Control of Gene Expression. Springer Berlin Heidelberg, 1990. http://dx.doi.org/10.1007/978-3-642-75139-4_2.

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Richards, William R., and Shafique Fidai. "Studies on the Function of The pufQ Gene Product in Bacteriochlorophyll Biosynthesis." In Molecular Biology of Membrane-Bound Complexes in Phototrophic Bacteria. Springer US, 1990. http://dx.doi.org/10.1007/978-1-4757-0893-6_29.

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Vasilyeva, Lyudmila, Masato Miyake, Chikashi Nakamura, et al. "Expression of Luciferase Gene Under Control of the puf Promoter from Rhodobacter sphaeroides." In Twentieth Symposium on Biotechnology for Fuels and Chemicals. Humana Press, 1999. http://dx.doi.org/10.1007/978-1-4612-1604-9_31.

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Ouchane, S., M. Picaud, and C. Astier. "A new mutation in the puf L gene responsible for the terbutryn resistance phenotype in Rubrivivax gelatinosus." In Photosynthesis: from Light to Biosphere. Springer Netherlands, 1995. http://dx.doi.org/10.1007/978-94-009-0173-5_105.

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Ouchane, S., V. Pinta, M. Picaud, C. Vernotte, F. Reiss-Husson, and C. Astier. "Chromosomal Rearrangements in puf and crt Genes of Rubrivivax Gelatinosus Upon Photo-Oxidative Stress." In Photosynthesis: Mechanisms and Effects. Springer Netherlands, 1998. http://dx.doi.org/10.1007/978-94-011-3953-3_668.

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Huang, Hsin-Han, Lo-Yao Yeh, and Woei-Jiunn Tsaur. "PUF-Based Protocols About Mutual Authentication and Ownership Transfer for RFID Gen2 v2 Systems." In Transactions on Engineering Technologies. Springer Singapore, 2017. http://dx.doi.org/10.1007/978-981-10-3950-8_4.

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Farchaus, J. W., H. Gruenberg, K. A. Gray, J. Wachtveitl, and D. Oesterhelt. "The PUF B,A,L,M Genes are not Sufficient to Restore the Photosynthetic Plus Phenotype to a PUF L,M,X Deletion Strain." In Current Research in Photosynthesis. Springer Netherlands, 1990. http://dx.doi.org/10.1007/978-94-009-0511-5_44.

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Farchaus, J. W., H. Gruenberg, K. A. Gray, et al. "The puf B,A,L,M Genes are Not Sufficient to Restore the Photosynthetic Plus Phenotype to a puf L,M,X Deletion Strain." In Molecular Biology of Membrane-Bound Complexes in Phototrophic Bacteria. Springer US, 1990. http://dx.doi.org/10.1007/978-1-4757-0893-6_10.

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Caputo, J. M., G. Invernizzi, M. Ferroni, et al. "Liver gene expression in periparturient dairy goats fed diets enriched with stearate or PUFA." In Book of Abstracts of the 65th Annual Meeting of the European Association for Animal Production. Brill | Wageningen Academic, 2014. http://dx.doi.org/10.3920/9789086867998_656.

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Conference papers on the topic "PufM gene"

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Brenna, J. Thomas. "How does knowledge of omega-3 fatty acids inform the food system?" In 2022 AOCS Annual Meeting & Expo. American Oil Chemists' Society (AOCS), 2022. http://dx.doi.org/10.21748/cfsw6115.

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With over 40,000 studies published, omega-3s are among most studied compounds in all of biology. We know a great deal about their metabolism, genetics, and nutrition that has not been translated into the global industrial food system. Development and maintenance of the human and general neural function depends on a balanced nutritional supply of omega-6 and omega-3 PUFA. Omega-3s are the most labile of oil components, leading to rancidity during processing and limiting shelf-life. Recent research has clarified the roles of the human FADS1 and FADS2 genes as key to conversion of precursor alpha
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Svartholm, E., U. Haglund, J. Ljungberg, and U. Hedner. "THE EFFECT OF APROTININ ON EXPERIMENTAL PORCINE SEPTIC SHOCK." In XIth International Congress on Thrombosis and Haemostasis. Schattauer GmbH, 1987. http://dx.doi.org/10.1055/s-0038-1644243.

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Septic shock induces pronounced haemodynamic changes resulting in pulmonary microemboliz., complement activ. and an activ. of the coag. and fibrinol. systems. Only minor effects on the sepsis-induced changes were found on pretreatment with a variety of platelet aggr. inhib. (Svartholm et al 1986). Aprotinin inhibits among other enzymes kallikrein. Endotoxin shock was induced in 12 pigs by i .v. inf. of E.coli, six of vdiich got Aprotinin i.v. (1000000 KIE) immediately before the E.coli infusion. Another 6 pigs were used as controls. Haemodynamic parameters, platelet counts, fibrinol. act., fib
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Umeda, Taichi, Kazuya Shibagaki, Yusuke Nozaki, and Masaya Yoshikawa. "Lethal Genes Aware Genetic Programming Analysis for RO PUF." In 2018 IEEE 7th Global Conference on Consumer Electronics (GCCE). IEEE, 2018. http://dx.doi.org/10.1109/gcce.2018.8574699.

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Harris, CP, E. Fuertes, S. Koletzko, et al. "S84 Modification of the association of dietary PUFA with lung function by FADS gene variants in adolescents: results from the GINIplus and LISA birth cohorts." In British Thoracic Society Winter Meeting, Wednesday 17 to Friday 19 February 2021, Programme and Abstracts. BMJ Publishing Group Ltd and British Thoracic Society, 2021. http://dx.doi.org/10.1136/thorax-2020-btsabstracts.89.

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