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1
Dechnik, Belinda, Jody M. Webster, Luke Nothdurft, Gregory E. Webb, Jian-xin Zhao, Stephanie Duce, Juan C. Braga, Daniel L. Harris, Ana Vila-Concejo, and Marji Puotinen. "Influence of hydrodynamic energy on Holocene reef flat accretion, Great Barrier Reef." Quaternary Research 85, no. 1 (January 2016): 44–53. http://dx.doi.org/10.1016/j.yqres.2015.11.002.
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AbstractThe response of platform reefs to sea-level stabilization over the past 6 ka is well established for the Great Barrier Reef (GBR), with reefs typically accreting laterally from windward to leeward. However, these observations are based on few cores spread across reef zones and may not accurately reflect a reef's true accretional response to the Holocene stillstand. We present a new record of reef accretion based on 49 U/Th ages from Heron and One Tree reefs in conjunction with re-analyzed data from 14 reefs across the GBR. We demonstrate that hydrodynamic energy is the main driver of accretional direction; exposed reefs accreted primarily lagoon-ward while protected reefs accreted seawards, contrary to the traditional growth model in the GBR. Lateral accretion rates varied from 86.3 m/ka–42.4 m/ka on the exposed One Tree windward reef and 68.35 m/ka–15.7 m/ka on the protected leeward Heron reef, suggesting that wind/wave energy is not a dominant control on lateral accretion rates. This represents the most comprehensive statement of lateral accretion direction and rates from the mid-outer platform reefs of the GBR, confirming great variability in reef flat growth both within and between reef margins over the last 6 ka, and highlighting the need for closely-spaced transects.
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Becker, Alistair, Matthew D. Taylor, and Michael B. Lowry. "Monitoring of reef associated and pelagic fish communities on Australia’s first purpose built offshore artificial reef." ICES Journal of Marine Science 74, no. 1 (August 4, 2016): 277–85. http://dx.doi.org/10.1093/icesjms/fsw133.
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Artificial reefs now form part of an integrated approach to enhance fisheries around the world. A responsible approach to artificial reef deployment calls for clear, well defined goals prior to any reef being placed in the field, followed by subsequent monitoring to assess whether these goals are being achieved. In this study, to evaluate if an artificial reef off Sydney was meeting its goal of providing quality fishing opportunities through the establishment of a complex fish assemblage, a 4-year monitoring program was designed. This program examined the response of reef-associated and pelagic fishes to the deployment of a purpose built offshore reef, relative to control reefs. Fish were observed immediately following deployment, but the artificial reef fish assemblage remained distinct from the three natural control reefs throughout the monitoring period. Also, the artificial reef displayed inter-annual variability associated with successional processes, which was not evident on the natural reefs. Fish length data indicated that the artificial reef was providing resources for both juvenile and adults of a number of species. This study demonstrates artificial reefs can provide habitats for a diverse group of fish, but the assemblages are unlikely to mimic those on natural reefs. We have also shown that longer term monitoring periods, covering multiple years are required to gain a robust understanding of the response of fish to reef deployment. This information can be used to understand the benefits and limitations of future artificial reef deployments.
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Baldock, Tom, and William Ginzo. "MORPHOLOGICAL RESPONSE OF A REEF-FRONTED BEACH TO SEA LEVEL RISE AND REEF DEGRADATION." Coastal Engineering Proceedings, no. 36v (December 28, 2020): 1. http://dx.doi.org/10.9753/icce.v36v.sediment.1.
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The morphological response of reef-fronted beaches to sea level rise and reef degradation is investigated by physical modelling. Coral barrier and fringing reefs limit the wave energy reaching sandy beaches, providing protection to many communities worldwide (Ferrario et al., 2014). Sea level rise and loss of reef flat elevation through coral mortality are expected to alter water levels over such reefs in the future. Assessing the morphological response to these processes in the field is very difficult due to the timescale involved, and lack of data for current conditions. Numerical modelling of beach profile response is also poor, even for open coast sandy beaches, and there is limited work modelling of reef fronted beaches, although hydrodynamics can be modelled reasonably well (Buckley et al., 2014). Here, new experiments on beach response to rising water levels and reducing reef flat elevation without tides are presented and compared to a conceptual model that links total sediment transport to the wave height landward of the reef (Baldock et al., 2015). A summary of recent numerical modelling of 2D planform changes for the same scenario will also be presented.Recorded Presentation from the vICCE (YouTube Link): https://youtu.be/0ya0UH1Vpsk
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Lewis, Dakota M., Katie E. Durham, Linda J. Walters, and Geoffrey S. Cook. "A Resident Fish Guild as a Higher Trophic Level Indicator of Oyster Reef Restoration Success." Sustainability 13, no. 23 (November 24, 2021): 13004. http://dx.doi.org/10.3390/su132313004.
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Eastern oysters (Crassostrea virginica) are critical foundation species in estuarine waters, but due to a combination of natural and anthropogenic pressures, oyster abundance has declined. Restoring oyster reefs and monitoring restoration success often focuses on oyster metrics, but relatively infrequently, responses of higher trophic level species and the production of related ecosystem services are accounted for. To address this, we compare the response of a resident reef fish guild (gobies, blennies, toadfish) to standard metrics of oyster restoration success. Using lift nets and seines, natural and restored reefs were monitored over a two-year period within Mosquito Lagoon, Florida, USA. Standard metrics are indicative of restoration success; live oyster density and reef thickness increased in restored reefs after 12 and 24 months. Combined, live oyster density and reef thickness were the best predictors of annual resident reef fish abundance compared to water quality metrics. These results suggest that the benefits of restoring oyster reef habitat are conferred to broader components of the food web, with benefits accruing to reef resident fishes that are a key trophic linkage between lower trophic level foundation species and higher trophic level predators inhabiting coastal ecosystems.
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Bannister, R. J., C. N. Battershill, and R. de Nys. "Demographic variability and long-term change in a coral reef sponge along a cross-shelf gradient of the Great Barrier Reef." Marine and Freshwater Research 61, no. 4 (2010): 389. http://dx.doi.org/10.1071/mf09067.
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Effects of anthropogenic inputs on corals are well documented in regard to the ecology of coral reefs. However, responses to anthropogenic changes by sponge assemblages, also a key component of coral reefs, have received less attention. This paper quantifies differences in abundance, size and distribution of the sponge Rhopaloeides odorabile across a cross-shelf reef system on the central Great Barrier Reef (GBR) from neritic to outer reef oligotrophic waters. Benthic surveys were conducted in reef habitats spatially separated across the continental shelf. The mean abundance of R. odorabile increased significantly with increasing distance from coastal habitats, with 3.5 times more individuals offshore than inshore. In contrast, the mean size (volume) of R. odorabile individuals did not differ significantly across the cross-shelf reef system. On inshore reefs, R. odorabile was restricted to depths <10 m, with a preference for shallower depths (5–6 m). On offshore reefs, R. odorabile was found as deep as 15 m and predominantly between 9 and 10 m. These demographic changes in R. odorabile populations, together with a general population size reduction from surveys made decades prior, suggest a response to anthropogenic impacts across the continental shelf of the central GBR.
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Vicente, P., S. Martins-Cardoso, F. Almada, EJ Gonçalves, and AM Faria. "Chemical cues from habitats and conspecifics guide sand-smelt Atherina presbyter larvae to reefs." Marine Ecology Progress Series 650 (September 17, 2020): 191–202. http://dx.doi.org/10.3354/meps13311.
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Chemical cues have been widely addressed as potential cues for fish larvae to orient, detect or remain close to suitable habitat. However, most studies to date have been on tropical reef species and have suggested a chemosensory-driven homing behaviour, with only few studies on temperate fish indicating a less conclusive response to chemical cues. We hypothesized that detection and response to chemical cues might provide an important mechanism maintaining the larvae of a temperate reef fish species (sand-smelt Atherina presbyter Cuvier, 1829), close to their natal reef. The ability to discriminate chemical cues from different rocky reefs, and natal and non-natal conspecifics was tested. Water and shoals of sand-smelt larvae were collected from 3 reefs, and larval preference was tested in a 2-choice flume chamber. Larvae preferred nearby reefs over natal reefs and discriminated and preferred conspecifics from their natal reef. Moreover, our results suggested that both cues are equally relevant, as the combination of reef cues with conspecifics was more attractive to sand-smelt than either cue in isolation. When conspecific and reef preferences were tested against each other, there was no longer a clear preference for either cue. Additional tests suggested that preference for conspecifics could be driven by either diet or habitat-related chemical cues. Chemical cues and the corresponding detection mechanisms likely play an important role in finding suitable habitat and increasing the fitness of temperate reef fish.
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Suca, JJ, A. Lillis, IT Jones, MB Kaplan, AR Solow, AD Earl, S. Habtes, A. Apprill, JK Llopiz, and TA Mooney. "Variable and spatially explicit response of fish larvae to the playback of local, continuous reef soundscapes." Marine Ecology Progress Series 653 (October 29, 2020): 131–51. http://dx.doi.org/10.3354/meps13480.
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Understanding the cues that drive larval fish settlement is critical for managing reef systems under stress. Reef sound is increasingly reported to influence fish recruitment, yet the physical and acoustic environment in which larval fish settle varies in space and time. Accordingly, testing potential settlement cues under different conditions is vital for understanding their ecological importance. We conducted 2 sets of field playback experiments in St. John, US Virgin Islands, one nearshore (10 m depth) and the second ‘offshore’ (25 m depth), to assess the effects of reef soundscape playback on settlement rates of multiple reef fish families. In each experiment, nightly currents were quantified and we replicated the diel soundscape cycle using high, low, and control (silent) amplitude recordings from nearby reefs. The first experiment revealed significant current-based, down-stream reduction in larval fish catches in subsurface light traps and a significant effect of increasing amplitude of reef playbacks on larval lizardfish (Synodontidae) catches. In the second, offshore experiment which had no current effect, increasing reef playback amplitude led to a significantly greater catch of parrotfish (Scaridae) larvae and decreased larval pelagic fish catch. Total reef fish larvae only showed attraction to reef playbacks at the most nearshore site. This work demonstrates that while sound can play a role in the settlement of certain reef fishes, responses are influenced by multiple factors, including larger-scale physical processes, underscoring the need to consider the scale of soundscape cues for reef fish settlement within an oceanographic context.
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MacKellar, Mellissa C., Hamish A. McGowan, and Stuart R. Phinn. "Spatial Heterogeneity of Air–Sea Energy Fluxes over a Coral Reef—Heron Reef, Australia." Journal of Applied Meteorology and Climatology 51, no. 7 (July 2012): 1353–70. http://dx.doi.org/10.1175/jamc-d-11-0120.1.
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AbstractThe thermal environment of a coral reef is moderated by complex interactions of air–sea heat and moisture fluxes, local to synoptic-scale weather and reef hydrodynamics. Measurements of air–sea energy fluxes over coral reefs are essential to understanding the reef–atmosphere processes that underpin coral reef environmental conditions such as water temperature, cloud, precipitation, and local winds (such as during coral bleaching events). Such measurements over coral reefs have been rare, however, and the spatial heterogeneity of surface–atmosphere energy exchanges due to the different geomorphic and biological zones on coral reefs has not been captured. Accordingly, the heterogeneity of coral reefs with regard to substrate, benthic communities, and hydrodynamic processes has not been considered in the characterization of the surface radiation budget and energy balance of coral reefs. Here, the first concurrent in situ eddy covariance measurements of the surface energy balance and radiation transfers over different geomorphic zones of a coral reef are presented. Results showed differences in radiation transfers and sensible and latent heat fluxes over the reef, with higher Bowen ratios over the shallow reef flat zone. The energy flux divergence between sites increased with wind speed and during unstable, southeasterly trade winds with the net flux of heat being positive and negative over different geomorphic zones. The surface drag coefficient at measurement height ranged from 1 × 10−3 to 2.5 × 10−3, with no significant difference between sites. Results confirm that spatial variation in radiation and air–reef–water surface heat and moisture fluxes occurs across a lagoonal platform reef in response to local meteorological conditions, hydrodynamics, and benthic–substrate cover.
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Clark, Vanessa, Matheus A. Mello-Athayde, and Sophie Dove. "Colonies of Acropora formosa with greater survival potential have reduced calcification rates." PLOS ONE 17, no. 6 (June 9, 2022): e0269526. http://dx.doi.org/10.1371/journal.pone.0269526.
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Coral reefs are facing increasingly devasting impacts from ocean warming and acidification due to anthropogenic climate change. In addition to reducing greenhouse gas emissions, potential solutions have focused either on reducing light stress during heating, or on the potential for identifying or engineering “super corals”. A large subset of these studies, however, have tended to focus primarily on the bleaching response of corals, and assume erroneously that corals that bleach earlier in a thermal event die first. Here, we explore how survival, observable bleaching, coral skeletal growth (as branch extension and densification), and coral tissue growth (protein and lipid concentrations) varies for conspecifics collected from distinctive reef zones at Heron Island on the Southern Great Barrier Reef. A reciprocal transplantation experiment was undertaken using the dominant reef building coral (Acropora formosa) between the highly variable reef flat and the less variable reef slope environments. Coral colonies originating from the reef flat had higher rates of survival and amassed greater protein densities but calcified at reduced rates compared to conspecifics originating from the reef slope. The energetics of both populations however potentially benefited from greater light intensity present in the shallows. Reef flat origin corals moved to the lower light intensity of the reef slope reduced protein density and calcification rates. For A. formosa, genetic differences, or long-term entrainment to a highly variable environment, appeared to promote coral survival at the expense of calcification. The response decouples coral survival from carbonate coral reef resilience, a response that was further exacerbated by reductions in irradiance. As we begin to discuss interventions necessitated by the CO2 that has already been released into the atmosphere, we need to prioritise our focus on the properties that maintain valuable carbonate ecosystems. Rapid and dense calcification by corals such as branching Acropora is essential to the ability of carbonate coral reefs to rebound following disturbance events and maintain 3D structure but may be the first property that is sacrificed to enable coral genet survival under stress.
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Cardenas-Rojas, Dea, Edgar Mendoza, Mireille Escudero, and Manuel Verduzco-Zapata. "Assessment of the Performance of an Artificial Reef Made of Modular Elements through Small Scale Experiments." Journal of Marine Science and Engineering 9, no. 2 (January 28, 2021): 130. http://dx.doi.org/10.3390/jmse9020130.
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Artificial reefs have proven to be an optimal and effective solution in stabilizing coastlines around the world. They are submerged structures that imitate the protection service provided by natural reefs accomplishing the functions of dissipating wave energy and protecting beach morphology, but also being an ecological solution. In this paper, 2D small-scale experiments were performed to analyze the hydrodynamic, morphological, and ecological behavior of an artificial reef constructed of modular elements. Two typical beach-dune profiles were constructed in a wave flume over which two locations of an artificial reef were tested. From these tests, transmission coefficients were obtained as well as the beach profile response to the presence of the artificial reef. These results are used to discuss about the hydrodynamic, morphological, and ecological performance of the artificial reef. The proposed artificial reef showed good morphological performance while its hydrodynamic function had limited success. In turn, the ecologic performance was theoretically addressed.
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Bao, Xin, Jingbo Liu, Shutao Li, and Fei Wang. "Three-Dimensional Seismic Response Analysis of Zhubi Reef in the South China Sea." Shock and Vibration 2021 (August 4, 2021): 1–14. http://dx.doi.org/10.1155/2021/2195304.
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Reef islands are valuable terrestrial resources for ocean exploitation and utilization but face the serious threat of earthquake disasters. This study takes Zhubi Reef in the South China Sea as the research object and establishes a three-dimensional (3D) reef-seawater model to investigate the seismic response of Zhubi Reef. The 3D local topography and the effect of fluid-solid interaction are comprehensively considered. The artificial boundaries of fluid and solid domains are adopted to simulate the wave radiation and absorption of the semi-infinite seabed and the infinite seawater layer. The boundary substructure method is used to input the seismic waves into the numerical reef models. The results indicate that the seismic responses, including the peak values of the ground motions and the acceleration response spectra, are significantly amplified over Zhubi Reef. The acceleration response spectra on the reef flat shift closer towards the low-period direction compared with those of the seismic waves input from the subsea bedrock. In addition, the 3D topographic effect on the seismic response of Zhubi Reef is studied through a comparative analysis between two-dimensional (2D) and 3D reef models. The distribution laws of the peak response in the middle region of the reef flat calculated by the 2D and 3D models agree well with each other, and the differences are obvious in the edge areas where the local 3D topographies change drastically.
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Glasl, Bettina, David G. Bourne, Pedro R. Frade, and Nicole S. Webster. "Establishing microbial baselines to identify indicators of coral reef health." Microbiology Australia 39, no. 1 (2018): 42. http://dx.doi.org/10.1071/ma18011.
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Microorganisms make a significant contribution to reef ecosystem health and resilience via their critical role in mediating nutrient transformations, their interactions with macro-organisms and their provision of chemical cues that underpin the recruitment of diverse reef taxa. However, environmental changes often cause compositional and functional shifts in microbial communities that can have flow-on consequences for microbial-mediated processes. These microbial alterations may impact the health of specific host organisms and can have repercussions for the functioning of entire coral ecosystems. Assessing changes in reef microbial communities should therefore provide an early indicator of ecosystem impacts and would underpin the development of diagnostic tools that could help forecast shifts in coral reef health under different environmental states. Monitoring, management and active restoration efforts have recently intensified and diversified in response to global declines in coral reef health. Here we propose that regular monitoring of coral reef microorganisms could provide a rapid and sensitive platform for identifying declining ecosystem health that can complement existing management frameworks. By summarising the most common threats to coral reefs, with a particular focus on the Great Barrier Reef, and elaborating on the role of microbes in coral reef health and ecosystem stability, we highlight the diagnostic applicability of microbes in reef management programs. Fundamental to this objective is the establishment of microbial baselines for Australia's coral reefs.
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Burke, C. D., and S. J. Mazzullo. "Biotic and sedimentologic comparison of patch reefs on the north and south shelf of Belize, Central America." Paleontological Society Special Publications 6 (1992): 45. http://dx.doi.org/10.1017/s2475262200006055.
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Holocene patch-reefs occur throughout the shallow marine platform, to the lee of the barrier reef in northern and southern Belize, Central America. Patch reefs on the northern shelf that occur within an areally extensive patch reef complex (Mexico Rocks) indicate that differences exist between reefs here and well-studied patch reefs on the southern shelf that have been used by workers as a general model for patch reef development throughout Belize. This model proposes that patch reefs on the Belizean shelf are dominated by typical Atlantic-Caribbean, biotically-zoned coral assemblages of Acropora palmata and A. cervicornis that kept up or caught up with Holocene sea level rise during the last 8000 years to form large “keep up” or in some instances “catch up” reefs.In contrast to those in the south, the northern patch reefs are not biotically zoned, are dominated by Montastrea annularis rather than Acropora spp., and are much younger (400 years old) than those in the south. In addition, northern shelf patch reefs developed predominantly by lateral growth in a milieu of static sea level and are herein called “accretion” type reefs. These differences in biotic and sedimentologic parameters between reefs on the northern and southern shelves imply fundamentally different ecologic and sea level history controls on patch reef formation from north to south. A leading contributor to the variation among the reefs along the Belizean shelf may be species-specific growth rates of the coral species that initiate each patch reef, and response to sea level fluctuation versus stasis through time.
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Barott, Katie L., Ariana S. Huffmyer, Jennifer M. Davidson, Elizabeth A. Lenz, Shayle B. Matsuda, Joshua R. Hancock, Teegan Innis, Crawford Drury, Hollie M. Putnam, and Ruth D. Gates. "Coral bleaching response is unaltered following acclimatization to reefs with distinct environmental conditions." Proceedings of the National Academy of Sciences 118, no. 22 (May 28, 2021): e2025435118. http://dx.doi.org/10.1073/pnas.2025435118.
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Urgent action is needed to prevent the demise of coral reefs as the climate crisis leads to an increasingly warmer and more acidic ocean. Propagating climate change–resistant corals to restore degraded reefs is one promising strategy; however, empirical evidence is needed to determine whether stress resistance is affected by transplantation beyond a coral’s native reef. Here, we assessed the performance of bleaching-resistant individuals of two coral species following reciprocal transplantation between reefs with distinct pH, salinity, dissolved oxygen, sedimentation, and flow dynamics to determine whether heat stress response is altered following coral exposure to novel physicochemical conditions in situ. Critically, transplantation had no influence on coral heat stress responses, indicating that this trait was relatively fixed. In contrast, growth was highly plastic, and native performance was not predictive of performance in the novel environment. Coral metabolic rates and overall fitness were higher at the reef with higher flow, salinity, sedimentation, and diel fluctuations of pH and dissolved oxygen, and did not differ between native and cross-transplanted corals, indicating acclimatization via plasticity within just 3 mo. Conversely, cross-transplants at the second reef had higher fitness than native corals, thus increasing the fitness potential of the recipient population. This experiment was conducted during a nonbleaching year, so the potential benefits to recipient population fitness are likely enhanced during bleaching years. In summary, this study demonstrates that outplanting bleaching-resistant corals is a promising tool for elevating the resistance of coral populations to ocean warming.
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Kang, Jianhua, Hala F. Mohamed, Xinming Liu, Lulu Pei, Shuhong Huang, Xiangyuan Lin, Xinqing Zheng, and Zhaohe Luo. "Combined Culture and DNA Metabarcoding Analysis of Cyanobacterial Community Structure in Response to Coral Reef Health Status in the South China Sea." Journal of Marine Science and Engineering 10, no. 12 (December 13, 2022): 1984. http://dx.doi.org/10.3390/jmse10121984.
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Cyanobacteria occupy an extraordinarily diverse array of ecological niches in coral reefs because they play multifaceted roles, including primary carbon and nitrogen fixation, calcification, nutrient cycling, and oxygen production, as well as coral reef degradation through skeletal biocorrosion and polymicrobial diseases. In this study, cyanobacterial diversity in sediment, water, and coral tissues were explored in relation to coral health status (slightly, moderately, and severely damaged) of coral reefs at Weizhou Island, South China Sea. Microscopy of taxa morphological characteristics was combined with 16S rRNA gene metabarcoding. Fifteen and forty-three cyanobacterial genera were identified based on universal prokaryotic 16S rRNA gene primers and cyanobacteria-specific 16S rRNA gene primers metabarcoding, respectively, indicating a more sophisticated efficiency of the latter. In addition, three out of seven cyanobacterial strains that were isolated and identified based on morphology and phylogeny could not be detected using either molecular method. Therefore, culture-based combined cyanobacteria-specific 16S rRNA gene metabarcoding are highly recommended in future routine surveys. There was a clear distinction in cyanobacterial assemblage composition among locations with different coral health statuses, with degraded reefs exhibiting approximately a 1.25-fold increase in species compared to healthy habitats. In addition, the spreading of potentially toxic cyanobacteria, such as Nostoc and Lyngbya, in the degraded reef implies putative links to reef degradation. This study provides novel insights into the taxonomical diversity of cyanobacteria in tropical coral reefs. Metabarcoding is recommended as an effective tool for revealing cyanobacterial diversity patterns and thereby providing critical information for the effective management of coral reef ecosystems.
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Lirman, Diego, and Stephanie Schopmeyer. "Ecological solutions to reef degradation: optimizing coral reef restoration in the Caribbean and Western Atlantic." PeerJ 4 (October 20, 2016): e2597. http://dx.doi.org/10.7717/peerj.2597.
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Reef restoration activities have proliferated in response to the need to mitigate coral declines and recover lost reef structure, function, and ecosystem services. Here, we describe the recent shift from costly and complex engineering solutions to recover degraded reef structure to more economical and efficient ecological approaches that focus on recovering the living components of reef communities. We review the adoption and expansion of the coral gardening framework in the Caribbean and Western Atlantic where practitioners now grow and outplant 10,000’s of corals onto degraded reefs each year. We detail the steps for establishing a gardening program as well as long-term goals and direct and indirect benefits of this approach in our region. With a strong scientific basis, coral gardening activities now contribute significantly to reef and species recovery, provide important scientific, education, and outreach opportunities, and offer alternate livelihoods to local stakeholders. While challenges still remain, the transition from engineering to ecological solutions for reef degradation has opened the field of coral reef restoration to a wider audience poised to contribute to reef conservation and recovery in regions where coral losses and recruitment bottlenecks hinder natural recovery.
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Dee, Shannon, Thomas DeCarlo, Ivan Lozić, Jake Nilsen, and Nicola K. Browne. "Low Bioerosion Rates on Inshore Turbid Reefs of Western Australia." Diversity 15, no. 1 (January 4, 2023): 62. http://dx.doi.org/10.3390/d15010062.
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Bioerosion on inshore reefs is expected to increase with global climate change reducing reef stability and accretionary potential. Most studies investigating bioerosion have focused on external grazers, such as parrotfish and urchins, whose biomass is more easily measured. Yet, cryptic endolithic bioeroders such as macroboring (worms, sponges and bivalves) and microboring taxa (fungus and algae) have the potential to be the dominant source of reef erosion, especially among inshore reef systems exposed to increased nutrient supply. We measured bioerosion rates of bioeroder functional groups (microborers, macroborers, and grazers), and their response to environmental parameters (temperature, light, turbidity, chlorophyll a), as well as habitat variables (coral cover, turfing algae, macroalgae) across two inshore turbid reefs of north Western Australia. Total bioerosion rates were low (0.163 ± 0.012 kg m−2 year−1) likely due to low light and nutrient levels. Macroborers were the dominant source of bioerosion and were positively correlated with turfing algae cover, highlighting the role of turf-grazing fish on endolithic bioerosion rates. Overall low bioerosion rates suggest that despite the reduced coral cover and carbonate production, these reefs may still maintain positive reef accretion rates, at least under current environmental conditions. However, an improved understanding of relationships between environmental drivers, habitat and grazing pressure with bioeroding communities is needed to improve predictions of reef carbonate loss with future climate change.
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Silbiger, Nyssa J., Craig E. Nelson, Kristina Remple, Jessica K. Sevilla, Zachary A. Quinlan, Hollie M. Putnam, Michael D. Fox, and Megan J. Donahue. "Nutrient pollution disrupts key ecosystem functions on coral reefs." Proceedings of the Royal Society B: Biological Sciences 285, no. 1880 (June 6, 2018): 20172718. http://dx.doi.org/10.1098/rspb.2017.2718.
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There is a long history of examining the impacts of nutrient pollution and pH on coral reefs. However, little is known about how these two stressors interact and influence coral reef ecosystem functioning. Using a six-week nutrient addition experiment, we measured the impact of elevated nitrate (NO − 3 ) and phosphate (PO 3− 4 ) on net community calcification (NCC) and net community production (NCP) rates of individual taxa and combined reef communities. Our study had four major outcomes: (i) NCC rates declined in response to nutrient addition in all substrate types, (ii) the mixed community switched from net calcification to net dissolution under medium and high nutrient conditions, (iii) nutrients augmented pH variability through modified photosynthesis and respiration rates, and (iv) nutrients disrupted the relationship between NCC and aragonite saturation state documented in ambient conditions. These results indicate that the negative effect of NO − 3 and PO 3− 4 addition on reef calcification is likely both a direct physiological response to nutrients and also an indirect response to a shifting pH environment from altered NCP rates. Here, we show that nutrient pollution could make reefs more vulnerable to global changes associated with ocean acidification and accelerate the predicted shift from net accretion to net erosion.
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Hanke, Marc H., Haille Leija, Robert A. S. Laroche, Shailee Modi, Erin Culver-Miller, Rachel Sanchez, and Neha Bobby. "Localized Placement of Breakwater Reefs Influences Oyster Populations and Their Resilience after Hurricane Harvey." Ecologies 3, no. 3 (September 18, 2022): 422–34. http://dx.doi.org/10.3390/ecologies3030030.
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Populations of the eastern oyster (Crassostrea virginica) have been historically declining due to both natural and anthropogenic stressors. In response, oyster reefs have been created with many different approaches. This study utilized intertidal reefs constructed with oyster shells recycled from local restaurants to provide oyster settlement substrate, reef-associated faunal habitat, and a barrier to prevent marsh erosion. The objective of this study was to determine how oyster population characteristics changed over four years (2016–2019) on five different reefs within Sweetwater Lake, Galveston Bay, Texas, with a secondary objective to examine how oyster populations responded after Hurricane Harvey. Over the study period, five different reefs were sampled each summer by removing five bags per reef to determine oyster abundance and size demography. For the three years of the study (2017–2019), we also quantified oyster spat recruitment to the reefs. Oyster abundance and size (shell height) varied interactively by year and reef number, whereas oyster recruitment was significantly lower following Hurricane Harvey and then returned to pre-storm levels. Our results further highlight the importance of reef placement for breakwater-style reefs, as it appears the hydrodynamics within Sweetwater Lake influenced both oyster abundance and size among individual reefs. While the created reefs receive limited larval influx due to the narrow opening between Sweetwater Lake and Galveston Bay proper, this limited connectivity seemed to prevent mass mortality from the freshwater influx from Hurricane Harvey. Therefore, projects creating oyster reefs should consider local and regional landscape factors for the long-term success of oyster populations and robustness to natural disasters.
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Salles, Tristan, Jodie Pall, Jody M. Webster, and Belinda Dechnik. "Exploring coral reef responses to millennial-scale climatic forcings: insights from the 1-D numerical tool pyReef-Core v1.0." Geoscientific Model Development 11, no. 6 (June 8, 2018): 2093–110. http://dx.doi.org/10.5194/gmd-11-2093-2018.
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Abstract. Assemblages of corals characterise specific reef biozones and the environmental conditions that change spatially across a reef and with depth. Drill cores through fossil reefs record the time and depth distribution of assemblages, which captures a partial history of the vertical growth response of reefs to changing palaeoenvironmental conditions. The effects of environmental factors on reef growth are well understood on ecological timescales but are poorly constrained at centennial to geological timescales. pyReef-Core is a stratigraphic forward model designed to solve the problem of unobservable environmental processes controlling vertical reef development by simulating the physical, biological and sedimentological processes that determine vertical assemblage changes in drill cores. It models the stratigraphic development of coral reefs at centennial to millennial timescales under environmental forcing conditions including accommodation (relative sea-level upward growth), oceanic variability (flow speed, nutrients, pH and temperature), sediment input and tectonics. It also simulates competitive coral assemblage interactions using the generalised Lotka–Volterra system of equations (GLVEs) and can be used to infer the influence of environmental conditions on the zonation and vertical accretion and stratigraphic succession of coral assemblages over decadal timescales and greater. The tool can quantitatively test carbonate platform development under the influence of ecological and environmental processes and efficiently interpret vertical growth and karstification patterns observed in drill cores. We provide two realistic case studies illustrating the basic capabilities of the model and use it to reconstruct (1) the Holocene history (from 8500 years to present) of coral community responses to environmental changes and (2) the evolution of an idealised coral reef core since the last interglacial (from 140 000 years to present) under the influence of sea-level change, subsidence and karstification. We find that the model reproduces the details of the formation of existing coral reef stratigraphic sequences both in terms of assemblages succession, accretion rates and depositional thicknesses. It can be applied to estimate the impact of changing environmental conditions on growth rates and patterns under many different settings and initial conditions.
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El-Khaled, YC, F. Roth, A. Tilstra, N. Rädecker, DB Karcher, B. Kürten, BH Jones, CR Voolstra, and C. Wild. "In situ eutrophication stimulates dinitrogen fixation, denitrification, and productivity in Red Sea coral reefs." Marine Ecology Progress Series 645 (July 9, 2020): 55–66. http://dx.doi.org/10.3354/meps13352.
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Eutrophication (i.e. the increase of [in-]organic nutrients) may affect the functioning of coral reefs, but knowledge about the effects on nitrogen (N) cycling and its relationship to productivity within benthic reef communities is scarce. Thus, we investigated how in situ manipulated eutrophication impacted productivity along with 2 counteracting N-cycling pathways (dinitrogen [N2]-fixation, denitrification), using a combined acetylene assay. We hypothesised that N2-fixation would decrease and denitrification increase in response to eutrophication. N fluxes and productivity (measured as dark and light oxygen fluxes assessed in incubation experiments) were determined for 3 dominant coral reef functional groups (reef sediments, turf algae, and the scleractinian coral Pocillopora verrucosa) after 8 wk of in situ nutrient enrichment in the central Red Sea. Using slow-release fertiliser, we increased the dissolved inorganic N concentration by up to 7-fold compared to ambient concentrations. Experimental nutrient enrichment stimulated both N2-fixation and denitrification across all functional groups 2- to 7-fold and 2- to 4-fold, respectively. Productivity doubled in reef sediments and remained stable for turf algae and P. verrucosa. Our data therefore suggest that (1) turf algae are major N2-fixers in coral reefs, while denitrification is widespread among all investigated groups; (2) surprisingly, and contrary to our hypothesis, both N2-fixation and denitrification are involved in the response to moderate N eutrophication, and (3) stimulated N2-fixation and denitrification are not directly influenced by productivity. Our findings underline the importance and ubiquity of microbial N cycling in (Red Sea) coral reefs along with its sensitivity to eutrophication.
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Silbiger, N. J., and M. J. Donahue. "Secondary calcification and dissolution respond differently to future ocean conditions." Biogeosciences 12, no. 2 (January 29, 2015): 567–78. http://dx.doi.org/10.5194/bg-12-567-2015.
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Abstract. Climate change threatens both the accretion and erosion processes that sustain coral reefs. Secondary calcification, bioerosion, and reef dissolution are integral to the structural complexity and long-term persistence of coral reefs, yet these processes have received less research attention than reef accretion by corals. In this study, we use climate scenarios from RCP 8.5 to examine the combined effects of rising ocean acidity and sea surface temperature (SST) on both secondary calcification and dissolution rates of a natural coral rubble community using a flow-through aquarium system. We found that secondary reef calcification and dissolution responded differently to the combined effect of pCO2 and temperature. Calcification had a non-linear response to the combined effect of pCO2 and temperature: the highest calcification rate occurred slightly above ambient conditions and the lowest calcification rate was in the highest temperature–pCO2 condition. In contrast, dissolution increased linearly with temperature–pCO2 . The rubble community switched from net calcification to net dissolution at +271 μatm pCO2 and 0.75 °C above ambient conditions, suggesting that rubble reefs may shift from net calcification to net dissolution before the end of the century. Our results indicate that (i) dissolution may be more sensitive to climate change than calcification and (ii) that calcification and dissolution have different functional responses to climate stressors; this highlights the need to study the effects of climate stressors on both calcification and dissolution to predict future changes in coral reefs.
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Silbiger, N. J., and M. J. Donahue. "Secondary calcification and dissolution respond differently to future ocean conditions." Biogeosciences Discussions 11, no. 9 (September 2, 2014): 12799–831. http://dx.doi.org/10.5194/bgd-11-12799-2014.
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Abstract. Climate change threatens both the accretion and erosion processes that sustain coral reefs. Secondary calcification, bioerosion, and reef dissolution are integral to the structural complexity and long-term persistence of coral reefs, yet these processes have received less research attention than reef accretion by corals. In this study, we use climate scenarios from RCP8.5 to examine the combined effects of rising ocean acidity and SST on both secondary calcification and dissolution rates of a natural coral rubble community using a flow-through aquarium system. We found that secondary reef calcification and dissolution responded differently to the combined effect of pCO2 and temperature. Calcification had a non-linear response to the combined effect of pCO2-temperature: the highest calcification rate occurred slightly above ambient conditions and the lowest calcification rate was in the highest pCO2-temperature condition. In contrast, dissolution increased linearly with pCO2-temperature. The rubble community switched from net calcification to net dissolution at &plus;272 μatm pCO2 and 0.84 °C above ambient conditions, suggesting that rubble reefs may shift from net calcification to net dissolution before the end of the century. Our results indicate that dissolution may be more sensitive to climate change than calcification, and that calcification and dissolution have different functional responses to climate stressors, highlighting the need to study the effects of climate stressors on both calcification and dissolution to predict future changes in coral reefs.
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Wolanski, Eric, and Michael J. Kingsford. "Oceanographic and behavioural assumptions in models of the fate of coral and coral reef fish larvae." Journal of The Royal Society Interface 11, no. 98 (September 6, 2014): 20140209. http://dx.doi.org/10.1098/rsif.2014.0209.
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A predictive model of the fate of coral reef fish larvae in a reef system is proposed that combines the oceanographic processes of advection and turbulent diffusion with the biological process of horizontal swimming controlled by olfactory and auditory cues within the timescales of larval development. In the model, auditory cues resulted in swimming towards the reefs when within hearing distance of the reef, whereas olfactory cues resulted in the larvae swimming towards the natal reef in open waters by swimming against the concentration gradients in the smell plume emanating from the natal reef. The model suggested that the self-seeding rate may be quite large, at least 20% for the larvae of rapidly developing reef fish species, which contrasted with a self-seeding rate less than 2% for non-swimming coral larvae. The predicted self-recruitment rate of reefs was sensitive to a number of parameters, such as the time at which the fish larvae reach post-flexion, the pelagic larval duration of the larvae, the horizontal turbulent diffusion coefficient in reefal waters and the horizontal swimming behaviour of the fish larvae in response to auditory and olfactory cues, for which better field data are needed. Thus, the model suggested that high self-seeding rates for reef fish are possible, even in areas where the ‘sticky water’ effect is minimal and in the absence of long-term trapping in oceanic fronts and/or large-scale oceanic eddies or filaments that are often argued to facilitate the return of the larvae after long periods of drifting at sea.
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Uchoa, Marcella P., Craig P. O’Connell, and Thomas J. Goreau. "The effects of Biorock-associated electric fields on the Caribbean reef shark (Carcharhinus perezi) and the bull shark (Carcharhinus leucas)." Animal Biology 67, no. 3-4 (2017): 191–208. http://dx.doi.org/10.1163/15707563-00002531.
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Healthy coral reefs are biologically diverse and provide vital ecosystem services. However, decreasing water quality and global warming are key contributors to coral reef decline, which poses substantial environmental threats. In response to this degradation, an innovative coral reef restoration technology, called Biorock, utilizes weak direct current electric fields to cause limestone deposition on conductive materials, inevitably inducing prolific coral reef growth. Although expediting coral growth, research on how the associated electric fields may impact the behavioural patterns of teleosts and/or organisms (i.e. elasmobranchs) possessing electroreception capabilities is lacking. Therefore, we studied the behavioural responses of two shark species, the bull shark (Carcharhinus leucas) and the Caribbean reef shark (Carcharhinus perezi) and multiple teleost species towards weak direct current electric fields in Bimini, Bahamas. Generalized linear mixed model analyses based on 90 trials illustrate that both the feeding and avoidance behaviors of C. leucas and C. perezi were significantly associated with treatment type, with the weak experimental electrode treatments resulting in the greatest quantity of avoidances and fewest feedings for both species. However, data analyses illustrate that teleost feeding behavior was not observably impacted by experimental treatments. Although the Biorock technology exhibits promise in coral reef restoration, the findings from this study illustrate a need for future large-scale studies assessing shark behavioral patterns around these devices, since the deterrence of apex predators may impact ecosystem balance.
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McClure, Eva, Laura Richardson, Alexia Graba-Landry, Zoe Loffler, Garry Russ, and Andrew Hoey. "Cross-Shelf Differences in the Response of Herbivorous Fish Assemblages to Severe Environmental Disturbances." Diversity 11, no. 2 (February 13, 2019): 23. http://dx.doi.org/10.3390/d11020023.
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Cross-shelf differences in coral reef benthic and fish assemblages are common, yet it is unknown whether these assemblages respond uniformly to environmental disturbances or whether local conditions result in differential responses of assemblages at different shelf positions. Here, we compare changes in the taxonomic and functional composition, and associated traits, of herbivorous reef fish assemblages across a continental shelf, five years before and six months after two severe cyclones and a thermal bleaching event that resulted in substantial and widespread loss of live hard coral cover. Each shelf position maintained a distinct taxonomic assemblage of fishes after disturbances, but the assemblages shared fewer species among shelf positions. There was a substantial loss of species richness following disturbances within each shelf position. Total biomass of the herbivorous fish assemblage increased after disturbances on mid- and outer-shelf reefs, but not on inner-shelf reefs. Using trait-based analyses, we found there was a loss of trait richness at each shelf position, but trait specialisation and originality increased on inner-shelf reefs. This study highlights the pervasiveness of extreme environmental disturbances on ecological assemblages. Whilst distinct cross-shelf assemblages can remain following environmental disturbances, assemblages have reduced richness and are potentially more vulnerable to chronic localised stresses.
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Haslun, Joshua A., Briana Hauff-Salas, Kevin B. Strychar, James M. Cervino, and Nathaniel E. Ostrom. "Variation in Immune-Related Gene Expression Provides Evidence of Local Adaptation in Porites astreoides (Lamarck, 1816) between Inshore and Offshore Meta-Populations Inhabiting the Lower Florida Reef Tract, USA." Water 13, no. 15 (July 31, 2021): 2107. http://dx.doi.org/10.3390/w13152107.
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Coral communities of the Florida Reef Tract (FRT) have changed dramatically over the past 30 years. Coral cover throughout the FRT is disproportionately distributed; >70% of total coral cover is found within the inshore patch reef zone (<2 km from shore) compared to 30% found within the offshore bank reef zone (>5 km from shore). Coral mortality from disease has been differentially observed between inshore and offshore reefs along the FRT. Therefore, differences between the response of inshore and offshore coral populations to bacterial challenge may contribute to differences in coral cover. We examined immune system activation in Porites astreoides (Lamarck, 1816), a species common in both inshore and offshore reef environments in the FRT. Colonies from a representative inshore and offshore site were reciprocally transplanted and the expression of three genes monitored biannually for two years (two summer and two winter periods). Variation in the expression of eukaryotic translation initiation factor 3, subunit H (eIF3H), an indicator of cellular stress in Porites astreoides, did not follow annual patterns of seawater temperatures (SWT) indicating the contribution of other stressors (e.g., irradiance). Greater expression of tumor necrosis factor (TNF) receptor associated factor 3 (TRAF3), a signaling protein of the inflammatory response, was observed among corals transplanted to, or located within the offshore environment indicating that an increased immune response is associated with offshore coral more so than the inshore coral (p < 0.001). Corals collected from the offshore site also upregulated the expression of adenylyl cyclase associated protein 2 (ACAP2), increases which are associated with decreasing innate immune system inflammatory responses, indicating a counteractive response to increased stimulation of the innate immune system. Activation of the innate immune system is a metabolically costly survival strategy. Among the two reefs studied, the offshore population had a smaller mean colony size and decreased colony abundance compared to the inshore site. This correlation suggests that tradeoffs may exist between the activation of the innate immune system and survival and growth. Consequently, immune system activation may contribute to coral community dynamics and declines along the FRT.
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Comeau, S., R. C. Carpenter, C. A. Lantz, and P. J. Edmunds. "Ocean acidification accelerates dissolution of experimental coral reef communities." Biogeosciences 12, no. 2 (January 19, 2015): 365–72. http://dx.doi.org/10.5194/bg-12-365-2015.
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Abstract. Ocean acidification (OA) poses a severe threat to tropical coral reefs, yet much of what is know about these effects comes from individual corals and algae incubated in isolation under high pCO2. Studies of similar effects on coral reef communities are scarce. To investigate the response of coral reef communities to OA, we used large outdoor flumes in which communities composed of calcified algae, corals, and sediment were combined to match the percentage cover of benthic communities in the shallow back reef of Moorea, French Polynesia. Reef communities in the flumes were exposed to ambient (~ 400 μatm) and high pCO2 (~ 1300 μatm) for 8 weeks, and calcification rates measured for the constructed communities including the sediments. Community calcification was reduced by 59% under high pCO2, with sediment dissolution explaining ~ 50% of this decrease; net calcification of corals and calcified algae remained positive but was reduced by 29% under elevated pCO2. These results show that, despite the capacity of coral reef calcifiers to maintain positive net accretion of calcium carbonate under OA conditions, reef communities might transition to net dissolution as pCO2 increases, particularly at night, due to enhanced sediment dissolution.
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Comeau, S., R. C. Carpenter, C. A. Lantz, and P. J. Edmunds. "Ocean acidification accelerates dissolution of experimental coral reef communities." Biogeosciences Discussions 11, no. 8 (August 15, 2014): 12323–39. http://dx.doi.org/10.5194/bgd-11-12323-2014.
Full textAbstract:
Abstract. Ocean acidification (OA) poses a severe threat to tropical coral reefs, yet much of what is know about these effects comes from individual corals and algae incubated in isolation under high pCO2. Studies of similar effects on coral reef communities are scarce. To investigate the response of coral reef communities to OA, we used large outdoor flumes in which communities composed of calcified algae, corals, and sediment were combined to match the percentage cover of benthic communities in the shallow back reef of Moorea, French Polynesia. Reef communities in the flumes were exposed to ambient (~400 μatm) and high pCO2 (~1300 μatm) for 8 weeks, and calcification rates measured for the constructed communities including the sediments. Community calcification was depressed 59% under high pCO2, with sediment dissolution explaining ~50% of this decrease; net calcification of corals and calcified algae remained positive, but was reduced 29% under elevated pCO2. These results show that despite the capacity of coral reef calcifiers to maintain positive net accretion of calcium carbonate under OA conditions, reef communities might switch to net dissolution as pCO2 increases, particularly at night, due to enhanced sediment dissolution.
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Lantz, Coulson A., William Leggat, Jessica L. Bergman, Alexander Fordyce, Charlotte Page, Thomas Mesaglio, and Tracy D. Ainsworth. "Will daytime community calcification reflect reef accretion on future, degraded coral reefs?" Biogeosciences 19, no. 3 (February 14, 2022): 891–906. http://dx.doi.org/10.5194/bg-19-891-2022.
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Abstract. Coral bleaching events continue to drive the degradation of coral reefs worldwide, causing a shift in the benthic community from coral- to algae-dominated ecosystems. Critically, this shift may decrease the capacity of degraded coral reef communities to maintain net positive accretion during warming-driven stress events (e.g., reef-wide coral bleaching). Here we measured rates of net ecosystem calcification (NEC) and net ecosystem production (NEP) on a degraded coral reef lagoon community (coral cover < 10 % and algae cover > 20 %) during a reef-wide bleaching event in February 2020 at Heron Island on the Great Barrier Reef. We found that during this bleaching event, rates of NEP and NEC across replicate transects remained positive and did not change in response to bleaching. Repeated benthic surveys over a period of 20 d indicated an increase in the percent area of bleached coral tissue, corroborated by relatively low Symbiodiniaceae densities (∼ 0.6 × 106 cm−2) and dark-adapted photosynthetic yields in photosystem II of corals (∼ 0.5) sampled along each transect over this period. Given that a clear decline in coral health was not reflected in the overall NEC estimates, it is possible that elevated temperatures in the water column that compromise coral health enhanced the thermodynamic favorability for calcification in other ahermatypic benthic calcifiers. These data suggest that positive NEC on degraded reefs may not equate to the net positive accretion of a complex, three-dimensional reef structure in a future, warmer ocean. Critically, our study highlights that if coral cover continues to decline as predicted, NEC may no longer be an appropriate proxy for reef growth as the proportion of the NEC signal owed to ahermatypic calcification increases and coral dominance on the reef decreases.
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Fan, Tianlai, Kefu Yu, Jianxin Zhao, Wei Jiang, Shendong Xu, Yu Zhang, Rui Wang, et al. "Strontium isotope stratigraphy and paleomagnetic age constraints on the evolution history of coral reef islands, northern South China Sea." GSA Bulletin 132, no. 3-4 (August 14, 2019): 803–16. http://dx.doi.org/10.1130/b35088.1.
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Abstract Understanding the history of the response of coral reefs to past climate changes can provide valuable information for predicting the future response of modern reefs. However, dating such ancient biotic carbonate is still challenging because of its sensitivity to diagenetic alteration processes, scarcity of well-preserved fossils, and low magnetic mineral content. There have been a long debates about the origin and evolutionary history of coral reefs in the northern South China Sea, mainly due to the lack of direct and reliable age constraints. This provides us with a good opportunity to verify the practicability of different dating approaches, especially the strontium (Sr) isotope analysis of bulk carbonate. Here, we retrieved a 972.55-m-long core from the Xisha Islands to provide a credible chronologic constraint on the carbonate platform evolution. The lithostratigraphy, strontium isotope stratigraphy, and magnetostratigraphy were analyzed throughout the whole reef sequence. The lithostratigraphic results show that the 873.55 m reef sequence developed on an ancient volcaniclastic basement and experienced multiple evolutionary phases. The 87Sr/86Sr results of all 100 bulk carbonate samples vary from 0.708506 to 0.709168 and show a monotonic increase with decreasing depth, except for a few outliers. Trace-element criteria and stable isotope (δ18O and δ13C) methods were applied to these bulk carbonate samples, and results imply that the primary or near-primary seawater 87Sr/86Sr values were likely preserved, although different degrees of diagenetic alteration occurred. In addition, the paleomagnetic results indicate 10 normal polarity and eight reversed polarity magnetozones. Based on the 87Sr/86Sr ratios of the selected 58 samples and paleomagnetic reconstruction of polarity reversals, the bottom of the reef sequence is dated to 19.6 Ma, and the observed polarity chronozones extend from chron C6 (19.722–18.748 Ma) at 866.60 m to present at the top. Based on the new data, we propose a new chronologic framework for the evolutionary history of the reef islands, where: (1) the reefs initiated in the early Miocene (19.6 Ma) and were drowned until 16.26 Ma; (2) during 16.26–10.66 Ma, lagoon to lagoon slope environments prevailed; (3) the lagoon environment progressively transformed into a reef crest environment from 10.66 to 4.36 Ma and 4.36 to 1.59 Ma; and (4) the reef started to be drowned again during 1.59–0 Ma. Our study provides a new and reliable chronologic constraint on the general evolutionary history of the reef islands in the northern South China Sea. Furthermore, the 87Sr/86Sr results from bulk carbonate indicate that strontium isotope stratigraphy is a powerful dating tool only when rigid sample selection, sequential leaching procedures, and strict trace-element and isotopic criteria are applied.
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Fuller, Zachary L., Veronique J. L. Mocellin, Luke A. Morris, Neal Cantin, Jihanne Shepherd, Luke Sarre, Julie Peng, et al. "Population genetics of the coral Acropora millepora: Toward genomic prediction of bleaching." Science 369, no. 6501 (July 16, 2020): eaba4674. http://dx.doi.org/10.1126/science.aba4674.
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Although reef-building corals are declining worldwide, responses to bleaching vary within and across species and are partly heritable. Toward predicting bleaching response from genomic data, we generated a chromosome-scale genome assembly for the coral Acropora millepora. We obtained whole-genome sequences for 237 phenotyped samples collected at 12 reefs along the Great Barrier Reef, among which we inferred little population structure. Scanning the genome for evidence of local adaptation, we detected signatures of long-term balancing selection in the heat-shock co-chaperone sacsin. We conducted a genome-wide association study of visual bleaching score for 213 samples, incorporating the polygenic score derived from it into a predictive model for bleaching in the wild. These results set the stage for genomics-based approaches in conservation strategies.
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Lowe, Ryan J., James L. Falter, Stephen G. Monismith, and Marlin J. Atkinson. "Wave-Driven Circulation of a Coastal Reef–Lagoon System." Journal of Physical Oceanography 39, no. 4 (April 1, 2009): 873–93. http://dx.doi.org/10.1175/2008jpo3958.1.
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Abstract The response of the circulation of a coral reef system in Kaneohe Bay, Hawaii, to incident wave forcing was investigated using field data collected during a 10-month experiment. Results from the study revealed that wave forcing was the dominant mechanism driving the circulation over much of Kaneohe Bay. As predicted theoretically, wave setup generated near the reef crest resulting from wave breaking established a pressure gradient that drove flow over the reef and out of the two reef channels. Maximum reef setup was found to be roughly proportional to the offshore wave energy flux above a threshold root-mean-square wave height of 0.7 m (at which height setup was negligible). On the reef flat, the wave-driven currents increased approximately linearly with incident wave height; however, the magnitude of these currents was relatively weak (typically <20 cm s−1) because of (i) the mild fore-reef slope of Kaneohe Bay that reduced setup resulting from a combination of frictional wave damping and its relatively wide surf zone compared to steep-faced reefs, and (ii) the presence of significant wave setup inside its coastally bounded lagoon, resulting from frictional resistance on the lagoon–channel return flows, which reduced cross-reef setup gradients by 60%–80%. In general, the dynamics of these wave-driven currents roughly matched predictions derived from quasi-one-dimensional mass and momentum balances that incorporated radiation stresses, setup gradients, bottom friction, and the morphological properties of the reef–lagoon system.
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Bove, Colleen B., Sarah W. Davies, Justin B. Ries, James Umbanhowar, Bailey C. Thomasson, Elizabeth B. Farquhar, Jess A. McCoppin, and Karl D. Castillo. "Global change differentially modulates Caribbean coral physiology." PLOS ONE 17, no. 9 (September 2, 2022): e0273897. http://dx.doi.org/10.1371/journal.pone.0273897.
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Global change driven by anthropogenic carbon emissions is altering ecosystems at unprecedented rates, especially coral reefs, whose symbiosis with algal symbionts is particularly vulnerable to increasing ocean temperatures and altered carbonate chemistry. Here, we assess the physiological responses of three Caribbean coral (animal host + algal symbiont) species from an inshore and offshore reef environment after exposure to simulated ocean warming (28, 31°C), acidification (300–3290 μatm), and the combination of stressors for 93 days. We used multidimensional analyses to assess how a variety of coral physiological parameters respond to ocean acidification and warming. Our results demonstrate reductions in coral health in Siderastrea siderea and Porites astreoides in response to projected ocean acidification, while future warming elicited severe declines in Pseudodiploria strigosa. Offshore S. siderea fragments exhibited higher physiological plasticity than inshore counterparts, suggesting that this offshore population was more susceptible to changing conditions. There were no plasticity differences in P. strigosa and P. astreoides between natal reef environments, however, temperature evoked stronger responses in both species. Interestingly, while each species exhibited unique physiological responses to ocean acidification and warming, when data from all three species are modelled together, convergent stress responses to these conditions are observed, highlighting the overall sensitivities of tropical corals to these stressors. Our results demonstrate that while ocean warming is a severe acute stressor that will have dire consequences for coral reefs globally, chronic exposure to acidification may also impact coral physiology to a greater extent in some species than previously assumed. Further, our study identifies S. siderea and P. astreoides as potential ‘winners’ on future Caribbean coral reefs due to their resilience under projected global change stressors, while P. strigosa will likely be a ‘loser’ due to their sensitivity to thermal stress events. Together, these species-specific responses to global change we observe will likely manifest in altered Caribbean reef assemblages in the future.
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Masselink, Gerd, Eddie Beetham, and Paul Kench. "Coral reef islands can accrete vertically in response to sea level rise." Science Advances 6, no. 24 (June 2020): eaay3656. http://dx.doi.org/10.1126/sciadv.aay3656.
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Increased flooding due to sea level rise (SLR) is expected to render reef islands, defined as sandy or gravel islands on top of coral reef platforms, uninhabitable within decades. Such projections generally assume that reef islands are geologically inert landforms unable to adjust morphologically. We present numerical modeling results that show reef islands composed of gravel material are morphodynamically resilient landforms that evolve under SLR by accreting to maintain positive freeboard while retreating lagoonward. Such island adjustment is driven by wave overtopping processes transferring sediment from the beachface to the island surface. Our results indicate that such natural adaptation of reef islands may provide an alternative future trajectory that can potentially support near-term habitability on some islands, albeit with additional management challenges. Full characterization of SLR vulnerability at a given reef island should combine morphodynamic models with assessments of climate-related impacts on freshwater supplies, carbonate sediment supply, and future wave regimes.
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Chivers, D. P., M. I. McCormick, E. P. Fakan, R. P. Barry, J. W. Edmiston, and M. C. O. Ferrari. "Coral degradation alters predator odour signatures and influences prey learning and survival." Proceedings of the Royal Society B: Biological Sciences 286, no. 1903 (May 29, 2019): 20190562. http://dx.doi.org/10.1098/rspb.2019.0562.
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Habitat degradation is a key factor leading to the global loss of biodiversity. This problem is particularly acute in coral reef ecosystems. We investigated whether recognition of predator odours by damselfish was influenced by coral degradation and whether these changes altered survival in the wild. We taught whitespot damselfish to recognize the odour of a predator in the presence of live/healthy coral or dead/degraded coral. Fish were tested for a response to predator odours in environments that matched their conditioning environment or in environments that were mismatched. Next, we taught blue damselfish to recognize the odour of three common reef predators in live and degraded coral environments and then stocked them onto live or degraded patch reefs, where we monitored their subsequent response to predator odour along with their survival. Damselfish learned to recognize predator odours in both coral environments, but the intensity of their antipredator response was much greater when the conditioning and test environments matched. Fish released on degraded coral had about 50% higher survival if they had been trained in the presence of degraded coral rather than live coral. Altering the intensity of antipredator responses could have rather profound consequences on population growth.
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Kaergaard, Kasper, Simon Mortensen, Rolf Deigaard, Darrell Strauss, and Shannon Hunt. "DETAILED SHORELINE MODELLING OF NARROWNECK ARTIFICIAL REEF, QUEENSLAND, AUSTRALIA." Coastal Engineering Proceedings, no. 35 (June 23, 2017): 33. http://dx.doi.org/10.9753/icce.v35.sediment.33.
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The MIKE 21 FM Shoreline Model was applied to predict the coastal response of an artificial reef constructed in the surf-zone at Narrowneck, Queensland, Australia. The construction of the reef began in 1999 and completed in 2000; it was constructed from geotextile sand bag; a portion of which broke during construction and the following period. The reef was maintained by addition of new sand bags until 2006. The coastal response from the reef was analyzed by integrating the beach volume between the height of the dune and the depth of closure using measured coastal profiles. The analysis showed that in the early days of the reef a clear salient in the beach volume was observed in the lee of the reef. This salient was smaller in 2006 and in later years, 2012 and 2013 it was no longer visible in the data. The MIKE 21 FM shoreline model was applied to reproduce the observed coastal response. It was found that the position of the longshore bar relative to the position of the reef is important for the predicted coastal response. By running the model using a subset of the measured coastal profiles from the site, the envelope of the predicted coastal response matches reasonably well with the measured response.
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Austin Spiji, Davies, Mabel Manjaji-Matsumoto, and Zarinah Waheed. "Distribution of Mangrove Red Snapper Lutjanus argentimaculatus in response to hydrodynamic condition at the reef patches of Lankayan, Sugud Islands Marine Conservation Area, Sabah, Malaysia." Borneo Journal of Marine Science and Aquaculture (BJoMSA) 3, no. 2 (December 10, 2019): 68–71. http://dx.doi.org/10.51200/bjomsa.v3i2.1742.
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The species Lutjanus argentimaculatus is a prized food-fish in the tropical and subtropical fisheries, as well as the aquaculture industry. This study investigated the distribution of L. argentimaculatus at three patch reefs of Lankayan Island, within the Sugud Islands Marine Conservation Area. Fish surveys of this species were conducted 12 times at each of the selected patch reefs, from August 2016 until March 2017. In addition to taking underwater video footages, hydrodynamic parameters, i.e. water current direction and current speed were recorded during each survey. The distribution patterns of the fish were then plotted against these parameters to determine any correlation, in response to these parameters. As a result, we found a significant relationship between the current direction and the position of L. argentimaculatus at the reef where the schoolings were found to occur. We found that regardless of the current speed, the schools of L. argentimaculatus were always present at the reef slope facing the incoming current. This finding is important for the management and conservation of this species, which is a targeted species in the Live Reef Fish Food Trade (LRFFT), and is useful for the manager of a Marine Protected Area (MPA) in general. This finding is also important as it provides useful insights into the ecology of Lutjanus spp.
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Johansson, C. L., D. R. Bellwood, and M. Depczynski. "The importance of live coral for small-sized herbivorous reef fishes in physically challenging environments." Marine and Freshwater Research 63, no. 8 (2012): 672. http://dx.doi.org/10.1071/mf12011.
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Tropical coral reefs are facing increasing levels of disturbance, with predictions of ongoing reductions in live coral cover. The response of herbivorous fishes to loss of coral cover was investigated by analysing the relationship between the abundance of different sized herbivorous fishes and live coral cover, on a high flow reef slope and a sheltered back reef on Ningaloo Reef, Western Australia. We found positive relationships between coral cover and the abundance of small (10–20 cm) excavating and scraping parrotfishes on the slope, but a negative relationship between corals and small (10–15 cm) grazers. These relationships were not evident on back reefs. Generally, the abundance of large individuals were not correlated with live coral in either habitat. We suggest that in physically demanding environments small parrotfishes may utilise the structural complexity of corals to resist strong water flow and/or to reduce predation. Small acanthurid grazers may school to reduce energy costs and minimise predation risk. The loss of coral cover appears to be particularly important for small fishes in high energy habitats, especially non-schooling species.
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Perry, Chris T., Kyle M. Morgan, Ines D. Lange, and Robert T. Yarlett. "Bleaching-driven reef community shifts drive pulses of increased reef sediment generation." Royal Society Open Science 7, no. 4 (April 2020): 192153. http://dx.doi.org/10.1098/rsos.192153.
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The ecological impacts of coral bleaching on reef communities are well documented, but resultant impacts upon reef-derived sediment supply are poorly quantified. This is an important knowledge gap because these biogenic sediments underpin shoreline and reef island maintenance. Here, we explore the impacts of the 2016 bleaching event on sediment generation by two dominant sediment producers (parrotfish and Halimeda spp.) on southern Maldivian reefs. Our data identifies two pulses of increased sediment generation in the 3 years since bleaching. The first occurred within approximately six months after bleaching as parrotfish biomass and resultant erosion rates increased, probably in response to enhanced food availability. The second pulse occurred 1 to 3 years post-bleaching, after further increases in parrotfish biomass and a major (approx. fourfold) increase in Halimeda spp. abundance. Total estimated sediment generation from these two producers increased from approximately 0.5 kg CaCO 3 m −2 yr −1 (pre-bleaching; 2016) to approximately 3.7 kg CaCO 3 m −2 yr −1 (post-bleaching; 2019), highlighting the strong links between reef ecology and sediment generation. However, the relevance of this sediment for shoreline maintenance probably diverges with each producer group, with parrotfish-derived sediment a more appropriate size fraction to potentially contribute to local island shorelines.
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Pan, Yun, Huanhuan Tong, Yang Zhou, Can Liu, and Dawen Xue. "Numerical Simulation Study on Environment-Friendly Floating Reef in Offshore Ecological Belt under Wave Action." Water 13, no. 16 (August 18, 2021): 2257. http://dx.doi.org/10.3390/w13162257.
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An artificial floating reef is an important part of the coastal ecological corridor. The large-scale construction of floating reefs by optimizing mooring methods can effectively improve the ecological effects of coastal projects. The artificial floating reef belongs to coastal engineering, and wave resistance is fundamental to its structural design. In this paper, the method for processing coupling forces and motion, the method for judging the floating reef out of water surface, and the method for correcting velocity and acceleration of water mass points are elaborated in detail by using the finite element method and lumped-mass mooring model. By comparing and analyzing the results of physical experiment and numerical simulation, the correctness of the numerical model is verified. Finally, the diachronic variation of pitching angle of floating reef, the tension of the mooring rope, and the total tension of the fixed points of the fishing net were analyzed by the dynamic response numerical mode with a new type of mooring. The purpose of the current study was to provide a basis for the optimization of structure shape, the matching of floating body, and the counterweight of artificial floating reef.
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Mellin, Camille, Angus Thompson, Michelle J. Jonker, and Michael J. Emslie. "Cross-Shelf Variation in Coral Community Response to Disturbance on the Great Barrier Reef." Diversity 11, no. 3 (March 6, 2019): 38. http://dx.doi.org/10.3390/d11030038.
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Changes in coral reef health and status are commonly reported using hard coral cover, however such changes may also lead to substantial shifts in coral community composition. Here we assess the extent to which coral communities departed from their pre-disturbance composition following disturbance (disassembly), and reassembled during recovery (reassembly) along an environmental gradient across the continental shelf on Australia’s Great Barrier Reef. We show that for similar differences in coral cover, both disassembly and reassembly were greater on inshore reefs than mid- or outer-shelf reefs. This pattern was mostly explained by spatial variation in the pre-disturbance community composition, of which 28% was associated with chronic stressors related to water quality (e.g., light attenuation, concentrations of suspended sediments and chlorophyll). Tropical cyclones exacerbated the magnitude of community disassembly, but did not vary significantly among shelf positions. On the outer shelf, the main indicator taxa (tabulate Acropora) were mostly responsible for community dissimilarity, whereas contribution to dissimilarity was distributed across many taxa on the inner shelf. Our results highlight that community dynamics are not well captured by aggregated indices such as coral cover alone, and that the response of ecological communities to disturbance depends on their composition and exposure to chronic stressors.
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Liang, Christine Yiqing, Paul S. Kench, Murray R. Ford, and Holly K. East. "EVIDENCE OF RESILIENCE IN REEF ISLANDS IN RESPONSE TO RISING SEA LEVEL ON HUVADHOO ATOLL, MALDIVES." Coastal Engineering Proceedings, no. 36v (December 31, 2020): 43. http://dx.doi.org/10.9753/icce.v36v.papers.43.
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Reef islands are at the forefront of concern for future accelerating sea-level rise since their low-lying and isolated nature puts them at higher risk of marine inundation compared to continental coastlines. However, the perceived threat of complete submersion as implied by projected future sea-level rise and current island elevations do not consider the morphologically resilient nature of reef island systems. In particular, the role of sediment supply in the resilience of these islands is still relatively poorly studied. This study presents detailed descriptions of the sedimentary characteristics and stratigraphy of two lagoonal platform islands in Huvadhoo Atoll, Maldives, that formed during periods of Holocene sea-level rise. Island subsurface stratigraphy was reconstructed by analysing the skeletal composition and textural properties of 306 sediment samples from 37 cores extracted across the islands. Island sediments were dominated by coral sands with varied proportions of secondary constituents (molluscs, Halimeda, foraminifera, and crustose coralline algae). Downcore variations in composition show that the proportion of coral sands decrease with depth and the proportion of molluscs and Halimeda increase with depth (with the exception of cores that terminated on lagoon infill). The increased proportion of Halimeda and molluscs in these early island deposits may have resulted from the catch-up growth strategy of the reef during the mid-Holocene highstand as both organisms have high turnover rates and directly contribute to sediment production after death. The sedimentological response of increased Halimeda and molluscs highlights the resilient and dynamic nature of reef islands and the ability of reefs to adjust ecologically to changing sea levels.Recorded Presentation from the vICCE (YouTube Link): https://youtu.be/gy3zhqocMGw
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Harman, Tyler E., Briana Hauff-Salas, Joshua A. Haslun, James M. Cervino, and Kevin B. Strychar. "Decreased Photosynthetic Efficiency in Response to Site Translocation and Elevated Temperature Is Mitigated with LPS Exposure in Porites astreoides Symbionts." Water 14, no. 3 (January 26, 2022): 366. http://dx.doi.org/10.3390/w14030366.
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Coral reefs have been detrimentally impacted causing health issues due to elevated ocean temperatures as a result of increased greenhouse gases. Extreme temperatures have also exacerbated coral diseases in tropical reef environments. Numerous studies have outlined the impacts of thermal stress and disease on coral organisms, as well as understanding the influence of site-based characteristics on coral physiology. However, few have discussed the interaction of all three. Laboratory out-planting restoration projects have been of importance throughout impacted areas such as the Caribbean and southern Florida in order to increase coral cover in these areas. This study analyzes photosynthetic efficiency of Porites astreoides from the lower Florida Keys after a two-year reciprocal transplant study at inshore (Birthday reef) and offshore (Acer24 reef) sites to understand acclimation capacity of this species. Laboratory experiments subjected these colonies to one of three treatments: control conditions, increases in temperature, and increases in temperature plus exposure to an immune stimulant (lipopolysaccharide (LPS)) to determine their influence on photosynthetic efficiency and how stress events impact these measurements. In addition, this study is a continuation of previous studies from this group. Here, we aim to understand if these results are static or if an acclimation capacity could be found. Overall, we observed site-specific influences from the Acer24 reef site, which had significant decreases in photosynthetic efficiencies in 32 °C treatments compared to Birthday reef colonies. We suggest that high irradiance and lack of an annual recovery period from the Acer24 site exposes these colonies to significant photoinhibition. In addition, we observed significant increases in photosynthetic efficiencies from LPS exposure. We suggest host-derived antioxidants can mitigate the negative impacts of increased thermal stress. Further research is required to understand the full complexity of host immunity and symbiont photosynthetic interactions.
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Dixson, Danielle L., Geoffrey P. Jones, Philip L. Munday, Serge Planes, Morgan S. Pratchett, Maya Srinivasan, Craig Syms, and Simon R. Thorrold. "Coral reef fish smell leaves to find island homes." Proceedings of the Royal Society B: Biological Sciences 275, no. 1653 (August 26, 2008): 2831–39. http://dx.doi.org/10.1098/rspb.2008.0876.
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Recent studies have shown that some coral reef fish larvae return to natal reefs, while others disperse to distant reefs. However, the sensory mechanisms used to find settlement sites are poorly understood. One hypothesis is that larvae use olfactory cues to navigate home or find other suitable reef habitats. Here we show a strong association between the clownfish Amphiprion percula and coral reefs surrounding offshore islands in Papua New Guinea. Host anemones and A. percula are particularly abundant in shallow water beneath overhanging rainforest vegetation. A series of experiments were carried out using paired-choice flumes to evaluate the potential role of water-borne olfactory cues in finding islands. Recently settled A. percula exhibited strong preferences for: (i) water from reefs with islands over water from reefs without islands; (ii) water collected near islands over water collected offshore; and (iii) water treated with either anemones or leaves from rainforest vegetation. Laboratory reared-juveniles exhibited the same positive response to anemones and rainforest vegetation, suggesting that olfactory preferences are innate rather than learned. We hypothesize that A. percula use a suite of olfactory stimuli to locate vegetated islands, which may explain the high levels of self-recruitment on island reefs. This previously unrecognized link between coral reefs and island vegetation argues for the integrated management of these pristine tropical habitats.
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Plaisance, Laetitia, Kenan Matterson, Katharina Fabricius, Sergei Drovetski, Chris Meyer, and Nancy Knowlton. "Effects of low pH on the coral reef cryptic invertebrate communities near CO2 vents in Papua New Guinea." PLOS ONE 16, no. 12 (December 15, 2021): e0258725. http://dx.doi.org/10.1371/journal.pone.0258725.
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Small cryptic invertebrates (the cryptofauna) are extremely abundant, ecologically important, and species rich on coral reefs. Ongoing ocean acidification is likely to have both direct effects on the biology of these organisms, as well as indirect effects through cascading impacts on their habitats and trophic relationships. Naturally acidified habitats have been important model systems for studying these complex interactions because entire communities that are adapted to these environmental conditions can be analyzed. However, few studies have examined the cryptofauna because they are difficult to census quantitatively in topographically complex habitats and are challenging to identify. We addressed these challenges by using Autonomous Reef Monitoring Structures (ARMS) for sampling reef-dwelling invertebrates >2 mm in size and by using DNA barcoding for taxonomic identifications. The study took place in Papua New Guinea at two reef localities, each with three sites at varying distances from carbon dioxide seeps, thereby sampling across a natural gradient in acidification. We observed sharp overall declines in both the abundance (34–56%) and diversity (42–45%) of organisms in ARMS under the lowest pH conditions sampled (7.64–7.75). However, the overall abundance of gastropods increased slightly in lower pH conditions, and crustacean and gastropod families exhibited varying patterns. There was also variability in response between the two localities, despite their close proximity, as one control pH site displayed unusually low diversity and abundances for all invertebrate groups. The data illustrate the complexity of responses of the reef fauna to pH conditions, and the role of additional factors that influence the diversity and abundance of cryptic reef invertebrates.
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Xu, Bing, and Ying Zhang. "Spectral Discrimination of Coral Reef Benthic Substance and Implications for Environmental Protection." Advanced Materials Research 610-613 (December 2012): 3646–50. http://dx.doi.org/10.4028/www.scientific.net/amr.610-613.3646.
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Spectral reflectance of benthic substance is a fundamental parameter to coral reef environmental protection by remote sensing technology. It collected in situ a total of 44 spectral reflectance of healthy coral, fine sand, dead coral, sand mixed with coral rubble, and sea grass in Leizhou peninsula, China. Analyses of spectral reflectance revealed that there exist three distinct spectral zones, the high reflectance zone (400-580nm), the attenuation zone (580-720nm) and low reflectance zone (720-850nm). The reflectance between 400 to 580nm band range can be used to discriminate coral reefs and other substances efficiently. Meanwhile, water depth and quality has great influence on coral reef spectrum. By using spectral response function, analyses of simulated reflectance spectra for several remote sensors (ETM+, SPOT5, IKONOS, Quick bird) indicate that narrowband multispectral sensors have the ability to discriminate different benthic substances. The research demonstrates that basic reef benthic classes are spectrally identifiable and differentiable; it establishes the basis of utilizing remote sensing technology for environmental protection of coral reef ecosystem.
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Tortolero-Langarica, J. J. Adolfo, Alma P. Rodríguez-Troncoso, Amílcar L. Cupul-Magaña, and Baruch Rinkevich. "Micro-Fragmentation as an Effective and Applied Tool to Restore Remote Reefs in the Eastern Tropical Pacific." International Journal of Environmental Research and Public Health 17, no. 18 (September 9, 2020): 6574. http://dx.doi.org/10.3390/ijerph17186574.
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Coral reef ecosystems are continuously degraded by anthropogenic and climate change drivers, causing a widespread decline in reef biodiversity and associated goods and services. In response, active restoration methodologies and practices have been developed globally to compensate for losses due to reef degradation. Yet, most activities employ the gardening concept that uses coral nurseries, and are centered in easily-accessible reefs, with existing infrastructure, and impractical for coral reefs in remote locations. Here we evaluate the effectiveness of direct outplanting of coral micro-fragments (Pavona clavus and Pocillopora spp.) as a novel approach to restore remote reefs in the Islas Marías archipelago in the Eastern Tropical Pacific. Coral growth (height-width-tissue cover), survival percentage, extension rates (cm year−1), skeletal density (g cm−3) and calcification rates (g cm−2 year−1) were assessed over 13 months of restoration. In spite of detrimental effects of Hurricane Willa, transplants showed a greater-than-twofold increase in all growth metrics, with ~58–61% survival rate and fast self-attachment (within ~3.9 months) for studied species, with Pocilloporids exhibiting higher extension, skeletal density, and calcification rates than Pavona. While comprehensive long-term studies are required, direct transplantation methodologies of coral micro-fragments are emerging as time-effective and affordable restoration tools to mitigate anthropogenic and climate change impacts in remote and marginal reefs.
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Comeau, Steeve, Peter J. Edmunds, Coulson A. Lantz, and Robert C. Carpenter. "Daily variation in net primary production and net calcification in coral reef communities exposed to elevated <i>p</i>CO<sub>2</sub>." Biogeosciences 14, no. 14 (July 27, 2017): 3549–60. http://dx.doi.org/10.5194/bg-14-3549-2017.
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Abstract. The threat represented by ocean acidification (OA) for coral reefs has received considerable attention because of the sensitivity of calcifiers to changing seawater carbonate chemistry. However, most studies have focused on the organismic response of calcification to OA, and only a few have addressed community-level effects, or investigated parameters other than calcification, such as photosynthesis. Light (photosynthetically active radiation, PAR) is a driver of biological processes on coral reefs, and the possibility that these processes might be perturbed by OA has important implications for community function. Here we investigate how CO2 enrichment affects the relationships between PAR and community net O2 production (Pnet), and between PAR and community net calcification (Gnet), using experiments on three coral communities constructed to match (i) the back reef of Mo'orea, French Polynesia, (ii) the fore reef of Mo'orea, and (iii) the back reef of O'ahu, Hawaii. The results were used to test the hypothesis that OA affects the relationship between Pnet and Gnet. For the three communities tested, pCO2 did not affect the Pnet–PAR relationship, but it affected the intercept of the hyperbolic tangent curve fitting the Gnet–PAR relationship for both reef communities in Mo'orea (but not in O'ahu). For the three communities, the slopes of the linear relationships between Pnet and Gnet were not affected by OA, although the intercepts were depressed by the inhibitory effect of high pCO2 on Gnet. Our result indicates that OA can modify the balance between net calcification and net photosynthesis of reef communities by depressing community calcification, but without affecting community photosynthesis.
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Spreter, Philipp M., Markus Reuter, Regina Mertz-Kraus, Oliver Taylor, and Thomas C. Brachert. "Calcification response of reef corals to seasonal upwelling in the northern Arabian Sea (Masirah Island, Oman)." Biogeosciences 19, no. 15 (August 3, 2022): 3559–73. http://dx.doi.org/10.5194/bg-19-3559-2022.
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Abstract. Tropical shallow-water reefs are the most diverse ecosystems in the ocean. Their persistence rests upon adequate calcification rates of the reef building biota, such as reef corals. Coral calcification is favoured in oligotrophic environments with high seawater saturation states of aragonite (Ωsw), which leads to an increased vulnerability to anthropogenic ocean acidification and eutrophication. Here we present Porites calcification records from the northern Arabian Sea upwelling zone and investigate the coral calcification response to low Ωsw and high nutrient concentrations due to seasonal upwelling. The calcification rate was determined from the product of skeletal extension rate and bulk density. Skeletal Ba/Ca and Li/Mg proxy data were used to identify skeletal portions that calcified during upwelling and non-upwelling seasons, respectively, and to reconstruct growth temperatures. With regard to sub-annual calcification patterns, our results demonstrate compromised calcification rates during the upwelling season. This is due to declining extension rates, which we attribute to light dimming caused by high primary production. Interestingly, seasonal variations in skeletal density show no relationship with temporally low Ωsw during upwelling. This suggests relatively constant, year-round saturation states of aragonite at the site of calcification (Ωcf) independent of external variability in Ωsw. Although upwelling does not affect seasonal density variability, exceptionally low mean annual density implies permanent Ωcf adjustment to the lowest sub-annual Ωsw (e.g. upwelling). In the Arabian Sea upwelling zone, the mean annual calcification rate is similar to Porites from non-upwelling regions because low skeletal density is compensated by high extension growth. Variable responses of reef coral extension to nutrients, which either exacerbate or compensate negative effects of diminished skeletal density associated with ocean acidification, may therefore be critical to the maintenance of adequate carbonate accumulation rates in coral reefs under global change.