Log in

Relevant bibliographies by topics / Rhizobiome / Journal articles

To see the other types of publications on this topic, follow the link: Rhizobiome.

Journal articles on the topic 'Rhizobiome'

Author: Grafiati

Published: 7 September 2021

Last updated: 21 June 2025

Create a spot-on reference in APA, MLA, Chicago, Harvard, and other styles

Select a source type:

Consult the top 50 journal articles for your research on the topic 'Rhizobiome.'

Next to every source in the list of references, there is an 'Add to bibliography' button. Press on it, and we will generate automatically the bibliographic reference to the chosen work in the citation style you need: APA, MLA, Harvard, Chicago, Vancouver, etc.

You can also download the full text of the academic publication as pdf and read online its abstract whenever available in the metadata.

Browse journal articles on a wide variety of disciplines and organise your bibliography correctly.

1

Ariza-Mejía, Daniella, Guadalupe Oyoque-Salcedo, Valentina Angóa-Pérez, Hortencia G. Mena-Violante, Dioselina Álvarez-Bernal, and Jesús R. Torres-García. "Diversity and Potential Function of the Bacterial Rhizobiome Associated to Physalis Ixocarpa Broth. in a Milpa System, in Michoacan, Mexico." Agronomy 12, no. 8 (2022): 1780. http://dx.doi.org/10.3390/agronomy12081780.

Full text

Abstract:

Michoacan state has a long history in plant domestication’s. Physalis ixocarpa is a native plant that growth associated to maize crops from this region. Due to the domestication process includes the adaptation to environmental factors, we ask if (1) Does P. ixocarpa has the capacity of association with bacterial communities of the zone where it was domesticated? and (2) Does the rhizobiome of this plant can increase the potential functions in the soil? An experiment was established in a traditional milpa system. Samples of rhizobiome from corn, P. ixocarpa, P. philadelphica, and soil were sequ

APA, Harvard, Vancouver, ISO, and other styles

2

Orozco-Mosqueda, Ma del Carmen, Ajay Kumar, Olubukola Oluranti Babalola, and Gustavo Santoyo. "Rhizobiome Transplantation: A Novel Strategy beyond Single-Strain/Consortium Inoculation for Crop Improvement." Plants 12, no. 18 (2023): 3226. http://dx.doi.org/10.3390/plants12183226.

Full text

Abstract:

The growing human population has a greater demand for food; however, the care and preservation of nature as well as its resources must be considered when fulfilling this demand. An alternative employed in recent decades is the use and application of microbial inoculants, either individually or in consortium. The transplantation of rhizospheric microbiomes (rhizobiome) recently emerged as an additional proposal to protect crops from pathogens. In this review, rhizobiome transplantation was analyzed as an ecological alternative for increasing plant protection and crop production. The differences

APA, Harvard, Vancouver, ISO, and other styles

3

Pollak, Shaul, and Otto X. Cordero. "Rhizobiome shields plants from infection." Nature Microbiology 5, no. 8 (2020): 978–79. http://dx.doi.org/10.1038/s41564-020-0766-1.

Full text

APA, Harvard, Vancouver, ISO, and other styles

4

Prabha, Ratna, Dhananjaya P. Singh, Shailendra Gupta, Vijai Kumar Gupta, Hesham A. El-Enshasy, and Mukesh K. Verma. "Rhizosphere Metagenomics of Paspalum scrobiculatum L. (Kodo Millet) Reveals Rhizobiome Multifunctionalities." Microorganisms 7, no. 12 (2019): 608. http://dx.doi.org/10.3390/microorganisms7120608.

Full text

Abstract:

Multifunctionalities linked with the microbial communities associated with the millet crop rhizosphere has remained unexplored. In this study, we are analyzing microbial communities inhabiting rhizosphere of kodo millet and their associated functions and its impact over plant growth and survival. Metagenomics of Paspalum scrobiculatum L.(kodo millet) rhizopshere revealed taxonomic communities with functional capabilities linked to support growth and development of the plants under nutrient-deprived, semi-arid and dry biotic conditions. Among 65 taxonomically diverse phyla identified in the rhi

APA, Harvard, Vancouver, ISO, and other styles

5

Cotton, T. E. Anne, Pierre Pétriacq, Duncan D. Cameron, et al. "Metabolic regulation of the maize rhizobiome by benzoxazinoids." ISME Journal 13, no. 7 (2019): 1647–58. http://dx.doi.org/10.1038/s41396-019-0375-2.

Full text

APA, Harvard, Vancouver, ISO, and other styles

6

Somera, Tracey, Mark Mazzola, and Chris Cook. "Directing the Apple Rhizobiome toward Resiliency Post-Fumigation." Agriculture 13, no. 11 (2023): 2104. http://dx.doi.org/10.3390/agriculture13112104.

Full text

Abstract:

Currently, there are no standard management practices to counteract the adverse effects of fumigation on the soil microbiome. In this study, a variety of pre-plant soil amendments were examined for their ability to recruit and maintain apple rhizosphere microbiomes that are suppressive to pathogen re-infestation of fumigated orchard soils. The capacity of these amendments to improve other characteristics of soil productivity was also evaluated. Results suggest that composted chicken manure and liquid chitin are likely to be detrimental to plant and soil health when used as a post-fumigation so

APA, Harvard, Vancouver, ISO, and other styles

7

Engel, Annette, Mireille Steck, Audrey Paterson, Gieson Amir Van, Megan Porter, and Rebecca Chong. "Rhizobiome of 'Ōhi'a Lehua (Metrosideros polymorpha) Offers Insight into Plant-Microbe-Invertebrate Interactions in the Subsurface." ARPHA Conference Abstracts 6 (October 17, 2023): e108263. https://doi.org/10.3897/aca.6.e108263.

Full text

Abstract:

Roots are common features in basaltic lava tube caves on the island of Hawai'i. For the past 50 years, new species of cave-adapted invertebrates, including cixiid planthoppers, crickets, thread-legged bugs, and spiders, have been discovered from root patches in lava tubes on different volcanoes and across variable climatic conditions. Assessing vegetation on the surface above lava tube passages, as well as genetic characterization of roots from within lava tubes, suggest that most roots belong to the native pioneer tree, 'ōhi'a lehua (<em>Metrosideros polymorpha</em>). Planthoppers are the pri

APA, Harvard, Vancouver, ISO, and other styles

8

Vieira, Selma, Johannes Sikorski, Sophie Dietz, et al. "Drivers of the composition of active rhizosphere bacterial communities in temperate grasslands." ISME Journal 14, no. 2 (2019): 463–75. http://dx.doi.org/10.1038/s41396-019-0543-4.

Full text

Abstract:

Abstract The active bacterial rhizobiomes and root exudate profiles of phytometers of six plant species growing in central European temperate grassland communities were investigated in three regions located up to 700 km apart, across diverse edaphic conditions and along a strong land use gradient. The recruitment process from bulk soil communities was identified as the major direct driver of the composition of active rhizosphere bacterial communities. Unexpectedly, the effect of soil properties, particularly soil texture, water content, and soil type, strongly dominated over plant properties a

APA, Harvard, Vancouver, ISO, and other styles

9

Przemieniecki, Sebastian Wojciech, Marta Damszel, and Olga Kosewska. "The Impact of Nanoparticles and Molecular Forms of TiO2 on the Rhizosphere of Plants in the Example of Common Wheat (Triticum aestivum L.)—Shifts in Microbiome Structure and Predicted Microbial Metabolic Functions." International Journal of Molecular Sciences 26, no. 2 (2025): 685. https://doi.org/10.3390/ijms26020685.

Full text

Abstract:

This study investigated the effects of various titanium nanoparticles (TiO2NPs) on the structure, function, and trophic levels of the wheat rhizobiome. In contrast to the typically toxic effects of small nanoparticles (~10 nm), this research focused on molecular TiO2 and larger nanoparticles, as follows: medium-sized (68 nm, NPs1) and large (>100 nm, NPs2). The results demonstrated significant yet diverse impacts of different TiO2 forms on the rhizosphere microbiota. Large TiO2NPs2 and molecular TiO2 adversely affected the bacteriobiome and mycobiome, leading to an increase in autotrophic m

APA, Harvard, Vancouver, ISO, and other styles

10

Olanrewaju, Oluwaseyi Samuel, Ayansina Segun Ayangbenro, Bernard R. Glick, and Olubukola Oluranti Babalola. "Plant health: feedback effect of root exudates-rhizobiome interactions." Applied Microbiology and Biotechnology 103, no. 3 (2018): 1155–66. http://dx.doi.org/10.1007/s00253-018-9556-6.

Full text

APA, Harvard, Vancouver, ISO, and other styles

11

Lee, Bo-Young, Nikki Andresen, Phil Sheridan, and Bonnie L. Brown. "Characterization of the Rhizobiome of the Yellow Pitcher Plant (Sarracenia flava) in Wild and Restored Habitats of Virginia." International Journal of Plant Biology 15, no. 4 (2024): 1405–17. https://doi.org/10.3390/ijpb15040097.

Full text

Abstract:

The yellow pitcher plant, Sarracenia flava, is an insectivorous perennial distributed extensively in southeastern North America. In Virginia, it is restricted to a few wetland ecosystems, with only one natural site known to remain. To uncover whether there were microbial differences in the rhizospheres across natural and reintroduced sites of pitcher plant restoration, shotgun metagenome sequencing was undertaken to characterize the microbiomes of the healthy rhizosphere in the last remaining natural stand in Virginia compared to rhizospheres sampled in two restored habitats where pitcher plan

APA, Harvard, Vancouver, ISO, and other styles

12

Rojas-Sánchez, Blanca, Hugo Castelán-Sánchez, Esmeralda Y. Garfias-Zamora, and Gustavo Santoyo. "Diversity of the Maize Root Endosphere and Rhizosphere Microbiomes Modulated by the Inoculation with Pseudomonas fluorescens UM270 in a Milpa System." Plants 13, no. 7 (2024): 954. http://dx.doi.org/10.3390/plants13070954.

Full text

Abstract:

Milpa is an agroecological production system based on the polyculture of plant species, with corn featuring as a central component. Traditionally, the milpa system does not require the application of chemicals, and so pest attacks and poor growth in poor soils can have adverse effects on its production. Therefore, the application of bioinoculants could be a strategy for improving crop growth and health; however, the effect of external inoculant agents on the endemic microbiota associated with corn has not been extensively studied. Here, the objective of this work was to fertilize a maize crop

APA, Harvard, Vancouver, ISO, and other styles

13

Kindtler, Nikolaj L., Sanea Sheikh, Jesper Richardy, et al. "Fertilizer regime and cultivar affect barley growth and rhizobiome composition." Applied Soil Ecology 198 (June 2024): 105384. http://dx.doi.org/10.1016/j.apsoil.2024.105384.

Full text

APA, Harvard, Vancouver, ISO, and other styles

14

Quattrone, Amanda, Yuguo Yang, Pooja Yadav, Karrie A. Weber, and Sabrina E. Russo. "Nutrient and Microbiome-Mediated Plant–Soil Feedback in Domesticated and Wild Andropogoneae: Implications for Agroecosystems." Microorganisms 11, no. 12 (2023): 2978. http://dx.doi.org/10.3390/microorganisms11122978.

Full text

Abstract:

Plants influence the abiotic and biotic environment of the rhizosphere, affecting plant performance through plant–soil feedback (PSF). We compared the strength of nutrient and microbe-mediated PSF and its implications for plant performance in domesticated and wild grasses with a fully crossed greenhouse PSF experiment using four inbred maize genotypes (Zea mays ssp. mays b58, B73-wt, B73-rth3, and HP301), teosinte (Z. mays ssp. parviglumis), and two wild prairie grasses (Andropogon gerardii and Tripsacum dactyloides) to condition soils for three feedback species (maize B73-wt, teosinte, Androp

APA, Harvard, Vancouver, ISO, and other styles

15

Pronovich, Nataliya, Polina Kuryntseva, and Polina Galitskaya. "Methods of increasing the microbial diversity of agricultural soils and plant protection." BIO Web of Conferences 118 (2024): 01035. http://dx.doi.org/10.1051/bioconf/202411801035.

Full text

Abstract:

The paper analyzes an array of scientific literature data in the field of studying methods for increasing microbial diversity of agricultural soils. The variety of biological products used in agriculture has been studied. Some biological products approved for use in the Russian Federation are given. The importance of hub species for the biodiversity of the rhizobiome of plants has been revealed. Approaches to obtaining of high-efficiency bioproducts are considered. The necessity of creating biological products to restore the microbial diversity of agricultural soils using hub species is substa

APA, Harvard, Vancouver, ISO, and other styles

16

Schmidt, Jennifer E., Jorge L. Mazza Rodrigues, Vanessa L. Brisson, Angela Kent, and Amélie C. M. Gaudin. "Impacts of directed evolution and soil management legacy on the maize rhizobiome." Soil Biology and Biochemistry 145 (June 2020): 107794. http://dx.doi.org/10.1016/j.soilbio.2020.107794.

Full text

APA, Harvard, Vancouver, ISO, and other styles

17

Liao, Hui-Ling, Gregory Bonito, J. Alejandro Rojas, et al. "Fungal Endophytes of Populus trichocarpa Alter Host Phenotype, Gene Expression, and Rhizobiome Composition." Molecular Plant-Microbe Interactions® 32, no. 7 (2019): 853–64. http://dx.doi.org/10.1094/mpmi-05-18-0133-r.

Full text

Abstract:

Mortierella and Ilyonectria genera include common species of soil fungi that are frequently detected as root endophytes in many plants, including Populus spp. However, the ecological roles of these and other endophytic fungi with respect to plant growth and function are still not well understood. The functional ecology of two key taxa from the P. trichocarpa rhizobiome, M. elongata PMI93 and I. europaea PMI82, was studied by coupling forest soil bioassays with environmental metatranscriptomics. Using soil bioassay experiments amended with fungal inoculants, M. elongata was observed to promote

APA, Harvard, Vancouver, ISO, and other styles

18

Leitão, Frederico, Glória Pinto, and Isabel Henriques. "Pinus radiata seedlings rhizobiome shifts in response to foliar and root phosphite application." European Journal of Soil Biology 123 (December 2024): 103688. http://dx.doi.org/10.1016/j.ejsobi.2024.103688.

Full text

APA, Harvard, Vancouver, ISO, and other styles

19

Ortiz, Yakshi, Carla Restrepo, Brayan Vilanova-Cuevas, Eugenio Santiago-Valentin, Susannah G. Tringe, and Filipa Godoy-Vitorino. "Geology and climate influence rhizobiome composition of the phenotypically diverse tropical tree Tabebuia heterophylla." PLOS ONE 15, no. 4 (2020): e0231083. http://dx.doi.org/10.1371/journal.pone.0231083.

Full text

APA, Harvard, Vancouver, ISO, and other styles

20

Refai, Mohammed Y., Aala A. Abulfaraj, Israa J. Hakeem, et al. "Rhizobiome Signature and Its Alteration Due to Watering in the Wild Plant Moringa oleifera." Sustainability 15, no. 3 (2023): 2745. http://dx.doi.org/10.3390/su15032745.

Full text

Abstract:

Metagenomic approach was used to detect microbial gene abundance and relative abundance in the rhizosphere of Moringa oleifera and surrounding bulk soil and to detect the response of soil microbes to watering. Expectedly, the number and abundance of non-redundant genes were extremely higher in bacteria followed by archaea, eukaryota and viruses. Results demonstrated unexpected high abundance of some microbes (ex., endophyte genus Nocardioides) in the rhizosphere that are supposed to exist mainly in other rhizocompartments. We suggest this differential distribution of microbes is due to the spe

APA, Harvard, Vancouver, ISO, and other styles

21

Acuña, Jacquelinne J., Luis G. Marileo, Macarena A. Araya, et al. "In Situ Cultivation Approach to Increase the Culturable Bacterial Diversity in the Rhizobiome of Plants." Journal of Soil Science and Plant Nutrition 20, no. 3 (2020): 1411–26. http://dx.doi.org/10.1007/s42729-020-00222-0.

Full text

APA, Harvard, Vancouver, ISO, and other styles

22

García-Gonzalo, P., A. E. Pradas del Real, M. Pirredda, M. J. Gismera, M. C. Lobo, and A. Pérez-Sanz. "Phytoavailability of Cr in Silene vulgaris: The role of soil, plant genotype and bacterial rhizobiome." Ecotoxicology and Environmental Safety 144 (October 2017): 283–90. http://dx.doi.org/10.1016/j.ecoenv.2017.06.043.

Full text

APA, Harvard, Vancouver, ISO, and other styles

23

Zhang, Baogang, Shuo Jiao, Gaodi Zhu, Huai Chen, Yanjiang Cai, and Scott X. Chang. "Neighboring plant community attributes drive rhizobiome assemblages of a focal plant in a Kobresia meadow." Geoderma 432 (April 2023): 116409. http://dx.doi.org/10.1016/j.geoderma.2023.116409.

Full text

APA, Harvard, Vancouver, ISO, and other styles

24

Kuramae, Eiko E., Stan Derksen, Thiago R. Schlemper, Maurício R. Dimitrov, Ohana Y. A. Costa, and Adriana P. D. da Silveira. "Sorghum Growth Promotion by Paraburkholderia tropica and Herbaspirillum frisingense: Putative Mechanisms Revealed by Genomics and Metagenomics." Microorganisms 8, no. 5 (2020): 725. http://dx.doi.org/10.3390/microorganisms8050725.

Full text

Abstract:

Bacteria from the genera Paraburkholderia and Herbaspirillum can promote the growth of Sorghum bicolor, but the underlying mechanisms are not yet known. In a pot experiment, sorghum plants grown on sterilized substrate were inoculated with Paraburkholderia tropica strain IAC/BECa 135 and Herbaspirillum frisingense strain IAC/BECa 152 under phosphate-deficient conditions. These strains significantly increased Sorghum bicolor cultivar SRN-39 root and shoot biomass. Shotgun metagenomic analysis of the rhizosphere revealed successful colonization by both strains; however, the incidence of coloniza

APA, Harvard, Vancouver, ISO, and other styles

25

Jamil, Fatima, Hamid Mukhtar, Mireille Fouillaud, and Laurent Dufossé. "Rhizosphere Signaling: Insights into Plant–Rhizomicrobiome Interactions for Sustainable Agronomy." Microorganisms 10, no. 5 (2022): 899. http://dx.doi.org/10.3390/microorganisms10050899.

Full text

Abstract:

Rhizospheric plant–microbe interactions have dynamic importance in sustainable agriculture systems that have a reduced reliance on agrochemicals. Rhizosphere signaling focuses on the interactions between plants and the surrounding symbiotic microorganisms that facilitate the development of rhizobiome diversity, which is beneficial for plant productivity. Plant–microbe communication comprises intricate systems that modulate local and systemic defense mechanisms to mitigate environmental stresses. This review deciphers insights into how the exudation of plant secondary metabolites can shape the

APA, Harvard, Vancouver, ISO, and other styles

26

Jamil, Fatima, Hamid Mukhtar, Mireille Fouillaud, and Laurent Dufossé. "Rhizosphere Signaling: Insights into Plant–Rhizomicrobiome Interactions for Sustainable Agronomy." Microorganisms 10, no. 5 (2022): 899. http://dx.doi.org/10.3390/microorganisms10050899.

Full text

Abstract:

Rhizospheric plant–microbe interactions have dynamic importance in sustainable agriculture systems that have a reduced reliance on agrochemicals. Rhizosphere signaling focuses on the interactions between plants and the surrounding symbiotic microorganisms that facilitate the development of rhizobiome diversity, which is beneficial for plant productivity. Plant–microbe communication comprises intricate systems that modulate local and systemic defense mechanisms to mitigate environmental stresses. This review deciphers insights into how the exudation of plant secondary metabolites can shape the

APA, Harvard, Vancouver, ISO, and other styles

27

Anggrainy, Eka Dewi, Arifah Hidayati, Roby Ibnu Syarifain, Muhammad Faizal Rezha Zulkarnain, and Tualar Simarmata. "Superior Nitrogen Fixing Bacteria Screening from Various Rhizobiome in Palm Oil Plantion, North Sangatta, East Kalimantan." IOP Conference Series: Earth and Environmental Science 748, no. 1 (2021): 012007. http://dx.doi.org/10.1088/1755-1315/748/1/012007.

Full text

Abstract:

Abstract Nitrogen fixing bacteria (NFB) plays an important role in increasing N availability for plants. Research to examine the ability of nitrogen fixing bacteria isolates to produce nitrogenase, phytohormone and the ability of nitrogen fixing bacteria isolates in the biological test process using the corn plant indicator as an indicator has been carried out from September 2018 to February 2019 in laboratories and greenhouses. The ability of nitrogen fixing bacteria was tested by the ARA method, while the phytohormone testing of nitrogen fixing bacteria was tested using the HPLC method. Bioa

APA, Harvard, Vancouver, ISO, and other styles

28

Lupwayi, Newton Z., Myriam Fernandez, Renee M. Petri, Andrea H. Brown, and Derrick A. Kanashiro. "Alteration of the organic wheat rhizobiome and enzyme activities by reduced tillage and diversified crop rotation." European Journal of Agronomy 144 (March 2023): 126726. http://dx.doi.org/10.1016/j.eja.2022.126726.

Full text

APA, Harvard, Vancouver, ISO, and other styles

29

Tang, Lu, Yimeng Shi, Yilu Zhang, Dihe Yang, and Changhong Guo. "Effects of Plant-Growth-Promoting Rhizobacteria on Soil Bacterial Community, Soil Physicochemical Properties, and Soil Enzyme Activities in the Rhizosphere of Alfalfa under Field Conditions." Diversity 15, no. 4 (2023): 537. http://dx.doi.org/10.3390/d15040537.

Full text

Abstract:

Background: Inoculation with plant-growth-promoting rhizobacteria (PGPR) effectively increases plant growth in agriculture. However, the role of the rhizobiome in plant growth remains unclear. Methods: Biolog Ecoplate and 16S rRNA gene high-throughput sequencing techniques were used to analyze the changes in microbial community diversity, composition, and function after PGPR inoculation. Soil physicochemical and enzyme activities were also measured. Results: PGPR inoculation significantly promoted the growth of alfalfa. Using a Biolog Ecoplate, inoculation improved the metabolic activity and c

APA, Harvard, Vancouver, ISO, and other styles

30

De Zutter, Noémie, Maarten Ameye, Jane Debode, et al. "Shifts in the rhizobiome during consecutive in planta enrichment for phosphate‐solubilizing bacteria differentially affect maize P status." Microbial Biotechnology 14, no. 4 (2021): 1594–612. http://dx.doi.org/10.1111/1751-7915.13824.

Full text

APA, Harvard, Vancouver, ISO, and other styles

31

Abán, Carla L., Giovanni Larama, Antonella Ducci, et al. "Soil Properties and Bacterial Communities Associated with the Rhizosphere of the Common Bean after Using Brachiaria brizantha as a Service Crop: A 10-Year Field Experiment." Sustainability 15, no. 1 (2022): 488. http://dx.doi.org/10.3390/su15010488.

Full text

Abstract:

Intensive agricultural farming practices, such as monoculture, require long bare fallow periods and the overuse of agrochemicals, which compromise soil health over time. Increasing plant diversity in agroecosystems with service crops represents a promising alternative to achieving sustainability goals. However, how specific cover crop species influence the abundance and structure of soil bacterial communities remains to be solved. In this study, we assessed the effects of B. brizantha in two different agricultural cycles for 10 years in a common bean monoculture system in the northwestern regi

APA, Harvard, Vancouver, ISO, and other styles

32

Przemieniecki, Sebastian Wojciech, Marta Damszel, Olga Kosewska, et al. "The Effects of Frass and Vermicompost Fertilization on the Biometrical Parameters of Plant and Soil Quality, and the Rhizobiome, in Red Beet (Beta vulgaris L.) Cultivation." Applied Sciences 14, no. 13 (2024): 5539. http://dx.doi.org/10.3390/app14135539.

Full text

Abstract:

Insect frass and vermicompost hold potential applications as fertilizers, with their abilities to improve plant resilience against unfavorable environmental conditions and increase their resistance to pests and diseases. In this study, we explored the effects of vermicompost fertilization, mealworm frass, and superworm frass as potential plant fertilizers for red beet cultivation. We analyzed the connections among chemical parameters, rhizobiome structure and function, and the biometrics of fertilizer-treated plants. In general, soils enriched with vermicompost and superworm frass exhibited th

APA, Harvard, Vancouver, ISO, and other styles

33

Cochran, Alyssa T., Jemma Bauer, Jessica L. Metcalf, et al. "Plant Selenium Hyperaccumulation Affects Rhizosphere: Enhanced Species Richness and Altered Species Composition." Phytobiomes Journal 2, no. 2 (2018): 82–91. http://dx.doi.org/10.1094/pbiomes-12-17-0051-r.

Full text

Abstract:

Little is known about the microbiomes associated with plants with unusual properties, including plants that hyperaccumulate toxic elements such as selenium (Se). Se hyperaccumulators contain up to 1.5% of their dry weight in Se, concentrations shown to affect ecological interactions with herbivores, fungal pathogens and neighboring plants. Hyperaccumulators also enrich their surrounding soil with Se, which may alter the rhizobiome. To investigate whether plant Se affects rhizobacterial diversity and composition, we used a combination of culture-independent and culture-based approaches. Sequenc

APA, Harvard, Vancouver, ISO, and other styles

34

Somera, Tracey S., Shiri Freilich, and Mark Mazzola. "Comprehensive analysis of the apple rhizobiome as influenced by different Brassica seed meals and rootstocks in the same soil/plant system." Applied Soil Ecology 157 (January 2021): 103766. http://dx.doi.org/10.1016/j.apsoil.2020.103766.

Full text

APA, Harvard, Vancouver, ISO, and other styles

35

Fazal, Aliya, Zhong-Ling Wen, Yun-Ting Lu, et al. "Assembly and shifts of the bacterial rhizobiome of field grown transgenic maize line carrying mcry1Ab and mcry2Ab genes at different developmental stages." Plant Growth Regulation 91, no. 1 (2020): 113–26. http://dx.doi.org/10.1007/s10725-020-00591-7.

Full text

APA, Harvard, Vancouver, ISO, and other styles

36

Zhang, Qian, Macarena M. Araya, Marcia Astorga-Eló, et al. "Composition and Potential Functions of Rhizobacterial Communities in a Pioneer Plant from Andean Altiplano." Diversity 14, no. 1 (2021): 14. http://dx.doi.org/10.3390/d14010014.

Full text

Abstract:

Plant microbiota that associate with pioneer plants are essential to their growth and adaptation to harsh conditions found in the Central Volcanic Zone of the Andes. In this sense, the rhizosphere of pioneer species represents a unique opportunity to examine how bacterial communities are recruited and support the growth of plants under abiotic stress conditions, such low nutrient availability, high solar irradiation, water scarcity, soil salinity, etc. In this study, we explored the community composition and potential functions of rhizobacteria obtained from specimens of Parastrephia quadrangu

APA, Harvard, Vancouver, ISO, and other styles

37

Esiobu, Nwadiuto, Karim Dawkins, Yasmine Sanhaji, et al. "Rhizosphere Microbiomes of Citrus Plants in Historically Undisturbed 100-Year-Old Groves Appear to Mitigate Susceptibility to Citrus Greening Disease." Microorganisms 13, no. 4 (2025): 763. https://doi.org/10.3390/microorganisms13040763.

Full text

Abstract:

Microbiome studies aimed at combating the citrus greening devastation caused by Liberibacter asiaticus abound. However, the role of farming practices, such as the massive use of herbicides, pesticides, and inorganic fertilizers on specific taxa and plant population immunity remains an important inquiry. To test our hypothesis that agricultural practices in managed Citrus groves induce root microbiome dysbiosis, potentially rendering citrus readily susceptible to citrus greening disease (CGD), we compared the CGD and root microbiome status of citrus plants in a rare > 130-year-old grove (no

APA, Harvard, Vancouver, ISO, and other styles

38

Hou, Dandi, Zhi Lin, Runze Wang, et al. "Cadmium Exposure-Sedum alfrediiPlanting Interactions Shape the Bacterial Community in the Hyperaccumulator Plant Rhizosphere." Applied and Environmental Microbiology 84, no. 12 (2018): e02797-17. http://dx.doi.org/10.1128/aem.02797-17.

Full text

Abstract:

ABSTRACTRhizospheric bacteria play important roles in plant tolerance and activation of heavy metals. Understanding the bacterial rhizobiome of hyperaccumulators may contribute to the development of optimized phytoextraction for metal-polluted soils. We used 16S rRNA gene amplicon sequencing to investigate the rhizospheric bacterial communities of the cadmium (Cd) hyperaccumulating ecotype (HE)Sedum alfrediiin comparison to its nonhyperaccumulating ecotype (NHE). Both planting of two ecotypes ofS. alfrediiand elevated Cd levels significantly decreased bacterial alpha-diversity and altered bact

APA, Harvard, Vancouver, ISO, and other styles

39

Leitão, Frederico, Glória Pinto, Joana Amaral, Pedro Monteiro, and Isabel Henriques. "New insights into the role of constitutive bacterial rhizobiome and phenolic compounds in two Pinus spp. with contrasting susceptibility to pine pitch canker." Tree Physiology, September 11, 2021. http://dx.doi.org/10.1093/treephys/tpab119.

Full text

Abstract:

Abstract The rhizobiome is being increasingly acknowledged as a key player in plant health and breeding strategies. The pine pitch canker (PPC), caused by the fungus Fusarium circinatum, affects pine species with varying susceptibility degrees. Our aims were to explore the bacterial rhizobiome of a susceptible (Pinus radiata) and a resistant (Pinus pinea) species together with other physiological traits, and to analyze shifts upon F. circinatum inoculation. Pinus seedlings were stem inoculated with F. circinatum spores and needle gas exchange and antioxidant-related parameters were analyzed in

APA, Harvard, Vancouver, ISO, and other styles

40

Goemann, Hannah M., Danielle E. M. Ulrich, Brent M. Peyton, La Verne Gallegos-Graves, and Rebecca C. Mueller. "Severe and mild drought cause distinct phylogenetically linked shifts in the blue grama (Bouteloua gracilis) rhizobiome." Frontiers in Microbiomes 2 (January 11, 2024). http://dx.doi.org/10.3389/frmbi.2023.1310790.

Full text

Abstract:

Plants rely on a diverse rhizobiome to regulate nutrient acquisition and plant health. With increasing severity and frequency of droughts worldwide due to climate change, untangling the relationships between plants and their rhizobiomes is vital to maintaining agricultural productivity and protecting ecosystem diversity. While some plant physiological responses to drought are generally conserved, patterns of root exudation (release of small metabolites shown to influence microbes) and the consequential effects on the plant rhizobiome can differ widely across plant species under drought. To add

APA, Harvard, Vancouver, ISO, and other styles

41

Bandopadhyay, Sreejata, Xingxing Li, Alan W. Bowsher, Robert L. Last, and Ashley Shade. "Disentangling plant- and environment-mediated drivers of active rhizosphere bacterial community dynamics during short-term drought." Nature Communications 15, no. 1 (2024). http://dx.doi.org/10.1038/s41467-024-50463-1.

Full text

Abstract:

AbstractMitigating the effects of climate stress on crops is important for global food security. The microbiome associated with plant roots, the rhizobiome, can harbor beneficial microbes that alleviate stress, but the factors influencing their recruitment are unclear. We conducted a greenhouse experiment using field soil with a legacy of growing switchgrass and common bean to investigate the impact of short-term drought severity on the recruitment of active bacterial rhizobiome members. We applied 16S rRNA and 16S rRNA gene sequencing for both crops and metabolite profiling for switchgrass. W

APA, Harvard, Vancouver, ISO, and other styles

42

Abulfaraj, Aala A., Ashwag Y. Shami, Nahaa M. Alotaibi, et al. "Exploration of genes encoding KEGG pathway enzymes in rhizospheric microbiome of the wild plant Abutilon fruticosum." AMB Express 14, no. 1 (2024). http://dx.doi.org/10.1186/s13568-024-01678-4.

Full text

Abstract:

AbstractThe operative mechanisms and advantageous synergies existing between the rhizobiome and the wild plant species Abutilon fruticosum were studied. Within the purview of this scientific study, the reservoir of genes in the rhizobiome, encoding the most highly enriched enzymes, was dominantly constituted by members of phylum Thaumarchaeota within the archaeal kingdom, phylum Proteobacteria within the bacterial kingdom, and the phylum Streptophyta within the eukaryotic kingdom. The ensemble of enzymes encoded through plant exudation exhibited affiliations with 15 crosstalking KEGG (Kyoto En

APA, Harvard, Vancouver, ISO, and other styles

43

Castellano-Hinojosa, Antonio, Ute Albrecht, and Sarah L. Strauss. "Interactions between rootstocks and compost influence the active rhizosphere bacterial communities in citrus." Microbiome 11, no. 1 (2023). http://dx.doi.org/10.1186/s40168-023-01524-y.

Full text

Abstract:

Abstract Background While the rootstock genotype (belowground part of a plant) can impact rhizosphere microbial communities, few studies have examined the relationships between rootstock genotype-based recruitment of active rhizosphere bacterial communities and the availability of root nutrients for plant uptake. Rootstocks are developed to provide resistance to disease or tolerance of abiotic stresses, and compost application is a common practice to also control biotic and abiotic stresses in crops. In this field study, we examined: (i) the effect of four citrus rootstocks and/or compost appl

APA, Harvard, Vancouver, ISO, and other styles

44

Singh, Arjun, Murugan Kumar, Hillol Chakdar, et al. "Influence of host genotype in establishing root associated microbiome of indica rice cultivars for plant growth promotion." Frontiers in Microbiology 13 (November 14, 2022). http://dx.doi.org/10.3389/fmicb.2022.1033158.

Full text

Abstract:

Rice plants display a unique root ecosystem comprising oxic-anoxic zones, harboring a plethora of metabolic interactions mediated by its root microbiome. Since agricultural land is limited, an increase in rice production will rely on novel methods of yield enhancement. The nascent concept of tailoring plant phenotype through the intervention of synthetic microbial communities (SynComs) is inspired by the genetics and ecology of core rhizobiome. In this direction, we have studied structural and functional variations in the root microbiome of 10 indica rice varieties. The studies on α and β-dive

APA, Harvard, Vancouver, ISO, and other styles

45

Sarkar, Soumyadev, Abigail Kamke, Kaitlyn Ward, et al. "Pseudomonas cultivated from Andropogon gerardii rhizosphere show functional potential for promoting plant host growth and drought resilience." BMC Genomics 23, no. 1 (2022). http://dx.doi.org/10.1186/s12864-022-09019-0.

Full text

Abstract:

Abstract Background Climate change will result in more frequent droughts that can impact soil-inhabiting microbiomes (rhizobiomes) in the agriculturally vital North American perennial grasslands. Rhizobiomes have contributed to enhancing drought resilience and stress resistance properties in plant hosts. In the predicted events of more future droughts, how the changing rhizobiome under environmental stress can impact the plant host resilience needs to be deciphered. There is also an urgent need to identify and recover candidate microorganisms along with their functions, involved in enhancing p

APA, Harvard, Vancouver, ISO, and other styles

46

Hima Parvathy, A., R. Santhoshkumar, and E. V. Soniya. "Next-generation sequencing-based comparative mapping and culture-based screening of bacterial rhizobiome in Phytophthora capsici-resistant and susceptible Piper species." Frontiers in Microbiology 15 (September 25, 2024). http://dx.doi.org/10.3389/fmicb.2024.1458454.

Full text

Abstract:

Black pepper (Piper nigrum L.), a highly valued spice crop, is economically significant as one of the most widely traded spices in the world. The global yield and quality of black pepper (Piper nigrum L.) are affected by foot rot-causing soil-borne oomycete pathogen Phytophthora capsici. To gain initial insights toward developing an approach that utilizes microbial genetic resources for controlling foot rot disease in black pepper, we mapped the rhizobiome communities in susceptible Piper nigrum L. and wild-resistant Piper colubrinum. The analysis showed compositional differences in the rhizob

APA, Harvard, Vancouver, ISO, and other styles

47

Meier, Michael A., Gen Xu, Martha G. Lopez-Guerrero, et al. "Association analyses of host genetics, root-colonizing microbes, and plant phenotypes under different nitrogen conditions in maize." eLife 11 (July 27, 2022). http://dx.doi.org/10.7554/elife.75790.

Full text

Abstract:

The root-associated microbiome (rhizobiome) affects plant health, stress tolerance, and nutrient use efficiency. However, it remains unclear to what extent the composition of the rhizobiome is governed by intraspecific variation in host plant genetics in the field and the degree to which host plant selection can reshape the composition of the rhizobiome. Here we quantify the rhizosphere microbial communities associated with a replicated diversity panel of 230 maize (Zea mays L.) genotypes grown in agronomically relevant conditions under high N (+N) and low N (-N) treatments. We analyze the mai

APA, Harvard, Vancouver, ISO, and other styles

48

Ferrarezi, Jessica Aparecida. "Metagenome-Assembled Genomes from maize rhizobiome contribute to unraveling of potential plant growth promoting bacteria." January 17, 2023. https://doi.org/10.5281/zenodo.7545503.

Full text

Abstract:

<strong>The rhizosphere microbiome (rhizobiome) comprises a reservoir of ecological traits that contributes to plant nutrition, health and defense, responding in different ways to plant growth-promoting bacteria (PGPB) inoculation. PGPB are capable of nutrient cycling, modulation of phytohormones, production of secondary metabolites, suppression of disease-causing agents, pests and weeds. Metagenome-assembled genomes (MAGs) are important tools to dissect the potential of particular microbes present in the rhizobiome. Our objective was to obtain high-quality MAGs (HQM) with PGPB potential from

APA, Harvard, Vancouver, ISO, and other styles

49

Schmidt, Jennifer E., Ashley DuVal, Alina Puig, Alexandra Tempeleu, and Taylor Crow. "Interactive and Dynamic Effects of Rootstock and Rhizobiome on Scion Nutrition in Cacao Seedlings." Frontiers in Agronomy 3 (November 18, 2021). http://dx.doi.org/10.3389/fagro.2021.754646.

Full text

Abstract:

Perennial agroecosystems often seek to optimize productivity by breeding nutrient-efficient, disease-resistant rootstocks. In cacao (Theobroma cacao L.), however, rootstock selection has traditionally relied on locally available open pollinated populations with limited data on performance. Furthermore, rootstock associations with the rhizobiome, or rhizosphere microbiome, have been neglected. Better understanding of rootstock and scion effects on cacao-specific traits, particularly those involved in root-microbe interactions and nutrient acquisition, could contribute to more efficient rootstoc

APA, Harvard, Vancouver, ISO, and other styles

50

Yadav, Pooja, Amanda Quattrone, Yuguo Yang, et al. "Zea mays genotype influences microbial and viral rhizobiome community structure." ISME Communications 3, no. 1 (2023). http://dx.doi.org/10.1038/s43705-023-00335-4.

Full text

Abstract:

AbstractPlant genotype is recognized to contribute to variations in microbial community structure in the rhizosphere, soil adherent to roots. However, the extent to which the viral community varies has remained poorly understood and has the potential to contribute to variation in soil microbial communities. Here we cultivated replicates of two Zea mays genotypes, parviglumis and B73, in a greenhouse and harvested the rhizobiome (rhizoplane and rhizosphere) to identify the abundance of cells and viruses as well as rhizobiome microbial and viral community using 16S rRNA gene amplicon sequencing

APA, Harvard, Vancouver, ISO, and other styles

We offer discounts on all premium plans for authors whose works are included in thematic literature selections. Contact us to get a unique promo code!