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Relevant bibliographies by topics / Ribozym

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Academic literature on the topic 'Ribozym'

Author: Grafiati

Published: 4 June 2021

Last updated: 27 January 2023

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Journal articles on the topic "Ribozym"

1

Piganeau, Nicolas, Andreas Jenne, Vincent Thuillier, and Michael Famulok. "Ein durch Doxycyclin reguliertes allosterisches Ribozym." Angewandte Chemie 112, no. 23 (2000): 4538–42. http://dx.doi.org/10.1002/1521-3757(20001201)112:23<4538::aid-ange4538>3.0.co;2-2.

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Piganeau, Nicolas, Andreas Jenne, Vincent Thuillier, and Michael Famulok. "Ein durch Doxycyclin reguliertes allosterisches Ribozym." Angewandte Chemie 113, no. 19 (2001): 3612. http://dx.doi.org/10.1002/1521-3757(20011001)113:19<3612::aid-ange11113612>3.0.co;2-r.

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Ohkawa, J., N. Yuyama, Y. Takebe, S. Nishikawa, and K. Taira. "Importance of independence in ribozyme reactions: kinetic behavior of trimmed and of simply connected multiple ribozymes with potential activity against human immunodeficiency virus." Proceedings of the National Academy of Sciences 90, no. 23 (1993): 11302–6. http://dx.doi.org/10.1073/pnas.90.23.11302.

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The kinetic behavior of ribozymes derived from two types of multiple-ribozyme expression vector were examined. In some cases, multiple ribozymes were expressed as a single RNA molecule and all the ribozymes were simply connected in tandem (connected type). In other cases, multiple ribozymes were flanked by cis-acting ribozymes at both their 5' and 3' ends so that, upon transcription, multiple ribozymes were trimmed at both their 5' and 3' ends, with resultant liberation of multiple independent ribozymes (shotgun type). When levels of ribozyme expression were examined for the shotgun-type vecto

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Kisich, Kevin O., Robert W. Malone, Paul A. Feldstein та Kent L. Erickson. "Specific Inhibition of Macrophage TNF-α Expression by In Vivo Ribozyme Treatment". Journal of Immunology 163, № 4 (1999): 2008–16. http://dx.doi.org/10.4049/jimmunol.163.4.2008.

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Abstract The overproduction of the cytokine TNF-α is associated with inflammatory and autoimmune diseases. We have developed a means to block TNF-α production with ribozymes directed against TNF-α mRNA to selectively inhibit its production in vitro and in vivo. Following cationic lipid-mediated delivery to peritoneal murine macrophages in culture, anti-TNF-α ribozymes were more effective inhibitors of TNF-α secretion than catalytically inactive ribozyme controls. Inhibition of TNF-α secretion was proportional to the concentration of ribozyme administered, with an IC50 of ∼10 nM. After i.p. inj

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Wieland, Markus, and Jörg S. Hartig. "Vom Inhibitor zum Aktivator: ein Hammerhead-Ribozym unter der Kontrolle eines G-Quartetts." Angewandte Chemie 118, no. 35 (2006): 6007–10. http://dx.doi.org/10.1002/ange.200600909.

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Lieber, A., and M. Strauss. "Selection of efficient cleavage sites in target RNAs by using a ribozyme expression library." Molecular and Cellular Biology 15, no. 1 (1995): 540–51. http://dx.doi.org/10.1128/mcb.15.1.540.

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Inactivation of gene expression by antisense mechanisms in general and by ribozymes in particular is a powerful technique for studying the function of a gene product. We have designed a strategy for expression of ribozymes, for selection of accessible cleavage sites in target RNAs, and for isolation of ribozymes from a library of random sequences flanking the unique sequence of a hammerhead. The expression cassette for ribozyme genes is based on adenovirus-associated RNA. Alternatively, we used polymerase III or the T7 phage transcription machinery. The ribozyme sequences are positioned in the

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Castanotto, D., J. R. Li, A. Michienzi, et al. "Intracellular ribozyme applications." Biochemical Society Transactions 30, no. 6 (2002): 1140–45. http://dx.doi.org/10.1042/bst0301140.

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The exquisite target selectivity of trans-acting ribozymes has fostered their use as potential therapeutic agents and tools for down-regulating cellular transcripts. In living cells, free diffusion of RNAs is extremely limited, if it exists at all. Thus, getting ribozymes to base-pair with their cognate targets requires co-localizing the ribozyme transcript with the target RNA. In addition, not all sites along a given target RNA are equally accessible to ribozyme base pairing. Cellular proteins greatly influence the trafficking and structure of RNA, and therefore making ribozymes work effectiv

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Fiola, Karine, Jean-Pierre Perreault, and Benoit Cousineau. "Gene Targeting in the Gram-Positive Bacterium Lactococcus lactis, Using Various Delta Ribozymes." Applied and Environmental Microbiology 72, no. 1 (2006): 869–79. http://dx.doi.org/10.1128/aem.72.1.869-879.2006.

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ABSTRACT The trans-acting antigenomic delta ribozyme, isolated from the human hepatitis delta virus, was shown to be highly stable and active in vitro, as well as in mammalian cell lines. However, the stability and gene-targeting competence of this small ribozyme have not been studied previously in bacterial cells. In this paper we describe the use of two variants of the trans-acting antigenomic delta ribozyme targeting the abundant EF-Tu mRNA in the industrially important gram-positive bacterium Lactococcus lactis. These two delta ribozyme variants were expressed at significant levels and wer

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Aigner, A., and F. Czubayko. "Bioaktive Ribozym/Polyethylenimin-Komplexe: Ein neues Verfahren zum effizienten und spezifischen Targeting tumorrelevanter Genprodukte." Chemie Ingenieur Technik 74, no. 5 (2002): 714–15. http://dx.doi.org/10.1002/1522-2640(200205)74:5<714::aid-cite1111714>3.0.co;2-#.

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Lilley, David M. J. "Catalysis by the nucleolytic ribozymes." Biochemical Society Transactions 39, no. 2 (2011): 641–46. http://dx.doi.org/10.1042/bst0390641.

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The nucleolytic ribozymes use general acid–base catalysis to contribute significantly to their rate enhancement. The VS (Varkud satellite) ribozyme uses a guanine and an adenine nucleobase as general base and acid respectively in the cleavage reaction. The hairpin ribozyme is probably closely similar, while the remaining nucleolytic ribozymes provide some interesting contrasts.

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Dissertations / Theses on the topic "Ribozym"

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Frauendorf, Christian. "Entwicklung eines Selektionsschemas zur Isolierung katalytischer Ribonucleinsäuren und eines dynamischen Verfahrens zur Bestimmung von Konzentrationen kleiner organischer Moleküle." [S.l. : s.n.], 2000. http://www.diss.fu-berlin.de/2001/11/index.html.

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Schlatterer, Jörg Christian. "Funktionalisierte Nukleinsäuren Studien & Selektion von Ribozymen /." [S.l. : s.n.], 2003. http://deposit.ddb.de/cgi-bin/dokserv?idn=968649416.

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Lamberth, Stefanie. "Bestimmung konformationeller und struktureller Eigenschaften mit NMR-Spektroskopie Synthese von Dolastatin-10-Derivaten, Hammerhead-Ribozym und Phospholamban /." [S.l.] : [s.n.], 2001. http://zaurak.tm.informatik.uni-frankfurt.de/diss/data/src/00000175/00000175.ps.gz.

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Schultz, Martin. "Entwicklung eines metabolisch stabilen Ribozyms gegen die mRNA des Parathormon-verwandten Proteins (PTHrP)." Doctoral thesis, [S.l.] : [s.n.], 2001. http://deposit.ddb.de/cgi-bin/dokserv?idn=962880841.

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Welz, Rüdiger. "Entwicklung eines Twinribozyms für die RNA-Reparatur." Doctoral thesis, Humboldt-Universität zu Berlin, Mathematisch-Naturwissenschaftliche Fakultät I, 2003. http://dx.doi.org/10.18452/14943.

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Ziel dieser Arbeit war die Entwicklung eines Twinribozyms, das durch zweifache Spaltung und anschließende zweifache Ligation den Fragmentaustausch innerhalb einer RNA-Substratsequenz katalysiert. Als Basis für dieses Konzept diente das Hairpinribozym, das durch die Einführung einer zusätzlichen Helix derart verändert wurde, dass die Verknüpfung zweier Einheiten in einem Twinribozym möglich wurde. Weitere Sequenz- und Strukturoptimierung führte zu zwei Einzelmotiven mit hoher Substratselektivität und verbesserter Kofaktorakzeptanz. Durch die Verwendung von 5-Benzylmercapto-1H-tetrazol als Akti

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Lobitz, Stephan [Verfasser]. "Posttranskriptionelle Expressionshemmung von ETV6/RUNX1 durch lentivirale Transduktion mit dem Ribozym buRz28 / Stephan Lobitz." Berlin : Medizinische Fakultät Charité - Universitätsmedizin Berlin, 2012. http://d-nb.info/1030381100/34.

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Materna, Verena Waltraut. "Bedeutung des ABC-Transporters MRP2/cMOAT/ABCC2 bei der Cisplatinresistenz humaner Tumorzellen." Doctoral thesis, [S.l.] : [s.n.], 2002. http://deposit.ddb.de/cgi-bin/dokserv?idn=96607078X.

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Meyer, Mélanie. "Contributions to the study of the architecture and evolution of ribozymes." Phd thesis, Université de Strasbourg, 2013. http://tel.archives-ouvertes.fr/tel-01063838.

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NcRNA represent most of primary transcripts RNA in higher eukaryotes and tune gene expression via diverse mechanisms. They adopt 3D structures composed at 70% by WC bp forming A-form helices linked by RNA motifs. We identified the pk-turn, a new RNA motif related to k-turns that allow for the formation of a bend of 60° between stems P16 and P17 from the bacterial RNaseP. Yet it features different sequence and structural requirements than k-turns. The 2nd ribozyme which got my attention is the LCrz inserted in GIR2, a group I intron. This twintron is observed in the pre-rRNA 18S of the small su

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Wang, Ji. "Développement d'une méthode SELEX pour l'identification de ribozymes pour l'aminoacylation et analyse d’ARN aminoacylés dans le transcriptome d'Escherichia coli." Thesis, Université Paris-Saclay (ComUE), 2016. http://www.theses.fr/2016SACLS269/document.

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Les ribozymes sont des ARN naturels ou artificiels possédant une activité catalytique. Les ribozymes artificiels ont été identifiés in vitro par la méthode SELEX, et plusieurs d'entre eux ont été caractérisés par des études cinétiques. Ces molécules sont impliquées dans des réactions de clivage, de ligation, de modification d'extrémités d'ARN, de polymérisation, de phosphorylation et d'activation de groupements acyl. Parce qu'elle est nécessaire à la traduction, l'aminoacylation des ARN joue un rôle évolutif important dans la transition du monde de l'ARN vers le monde moderne de l'ADN et des p

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Roy, Snigdha. "Cleavage and Ligation Studies in Hairpin and Hammerhead Ribozymes Using Site Specific Nucleotide Modifications." ScholarWorks @ UVM, 2008. http://scholarworks.uvm.edu/graddis/203.

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RNA catalysis is of fundamental importance in many biological functions, such as the peptidyl transferase activity of the ribosome and genetic control by riboswitches, among others. Small ribozymes are a convenient system to increase our understanding about the structure, folding and catalytic mechanism of ribozymes. This dissertation includes analysis of certain aspects of the catalytic mechanism in the hairpin and hammerhead ribozyme. In the hairpin ribozyme, we studied the functional consequences of molecular substitutions at two conserved positions, A9 and A10. These nucleotides are

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Books on the topic "Ribozym"

1

1932-, Eckstein Fritz, and Lilley, David M. J. 1948-, eds. Catalytic RNA. Springer, 1997.

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2

Therapeutic applications of ribozymes and riboswitches: Methods and protocols. Humana Press, 2014.

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3

Turner, Philip C. Ribozyme Protocols. Humana Press, 1997. http://dx.doi.org/10.1385/0896033899.

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C, Turner Philip, ed. Ribozyme protocols. Humana Press, 1997.

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Scarborough, Robert J., and Anne Gatignol, eds. Ribozymes. Springer US, 2021. http://dx.doi.org/10.1007/978-1-0716-0716-9.

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Hartig, Jörg S., ed. Ribozymes. Humana Press, 2012. http://dx.doi.org/10.1007/978-1-61779-545-9.

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7

Gibson, Ian. Antisense and Ribozyme Methodology: Laboratory Companion. Wiley-VCH, 2003.

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8

Lilley, David M. J. 1948- and Eckstein Fritz 1932-, eds. Ribozymes and RNA catalysis. RSC Publishing, 2008.

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9

Lilley, David M. J., and Fritz Eckstein, eds. Ribozymes and RNA Catalysis. Royal Society of Chemistry, 2007. http://dx.doi.org/10.1039/9781847557988.

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10

Scanlon, Kevin J. Therapeutic Applications of Ribozymes. Humana Press, 1998. http://dx.doi.org/10.1385/0896034771.

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Book chapters on the topic "Ribozym"

1

Aigner, Achim. "Verminderung der Genexpression über Ribozym-Targeting." In Gentechnische Methoden. Spektrum Akademischer Verlag, 2012. http://dx.doi.org/10.1007/978-3-8274-2430-3_16.

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Juhl, H., F. Czubayko, and D. Henne-Bruns. "Ribozym-targeting als gentherapeutisches Verfahren zur Behandlung maligner Tumore." In Vielfalt und Einheit der Chirurgie Humanität und Wissenschaft. Springer Berlin Heidelberg, 1998. http://dx.doi.org/10.1007/978-3-642-45774-6_361.

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Juhl, Hartmut, S. Downing, S. Hssieh, A. Wellstein, and F. Czubayko. "Ribozym-targeting reduziert die erb-B2 Expression an SKOV3-Karzinomzellen und inhibiert das Tumorwachstum in vivo." In Chirurgisches Forum ’97 für experimentelle und klinische Forschung. Springer Berlin Heidelberg, 1997. http://dx.doi.org/10.1007/978-3-642-60717-2_9.

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Robertson, Michael P. "Ribozyme." In Encyclopedia of Astrobiology. Springer Berlin Heidelberg, 2011. http://dx.doi.org/10.1007/978-3-642-11274-4_1375.

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Nahler, Gerhard. "ribozyme." In Dictionary of Pharmaceutical Medicine. Springer Vienna, 2009. http://dx.doi.org/10.1007/978-3-211-89836-9_1242.

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Floresco, Stan, Robert Kessler, Ronald L. Cowan, et al. "Ribozyme." In Encyclopedia of Psychopharmacology. Springer Berlin Heidelberg, 2010. http://dx.doi.org/10.1007/978-3-540-68706-1_1064.

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Robertson, Michael P. "Ribozyme." In Encyclopedia of Astrobiology. Springer Berlin Heidelberg, 2015. http://dx.doi.org/10.1007/978-3-662-44185-5_1375.

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Robertson, Michael P. "Ribozyme." In Encyclopedia of Astrobiology. Springer Berlin Heidelberg, 2014. http://dx.doi.org/10.1007/978-3-642-27833-4_1375-2.

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Wang, Zhiguo, and Baofeng Yang. "Ribozyme Method." In MicroRNA Expression Detection Methods. Springer Berlin Heidelberg, 2009. http://dx.doi.org/10.1007/978-3-642-04928-6_25.

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Sandberg, Jennifer A., Patrice A. Lee, and Nassim Usman. "Ribozyme Therapy." In New Drugs for Asthma, Allergy and COPD. KARGER, 2001. http://dx.doi.org/10.1159/000062200.

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Conference papers on the topic "Ribozym"

1

Yang, Yu, Dimitrios Stathis, Prashant Sharma, et al. "RiBoSOM." In SAMOS XVIII: Architectures, Modeling, and Simulation. ACM, 2018. http://dx.doi.org/10.1145/3229631.3229650.

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Schmidt, Christian, Rüdiger Welz, and Sabine Müller. "Ribozyme mediated RNA double cleavage." In XIth Symposium on Chemistry of Nucleic Acid Components. Institute of Organic Chemistry and Biochemistry, Academy of Sciences of the Czech Republic, 1999. http://dx.doi.org/10.1135/css199902197.

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BREAKER, RONALD R. "PROSPECTS FOR RIBOZYME DISCOVERY AND ANALYSIS." In 24th International Solvay Conference on Chemistry. WORLD SCIENTIFIC, 2018. http://dx.doi.org/10.1142/9789813237179_0049.

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McDonald, Isabel K., Stephen C. Holmes, Karen J. Young, Joseph S. Vyle, Timothy J. Pickering, and Jane A. Grasby. "Functional group mutagenesis of the hairpin ribozyme." In XIth Symposium on Chemistry of Nucleic Acid Components. Institute of Organic Chemistry and Biochemistry, Academy of Sciences of the Czech Republic, 1999. http://dx.doi.org/10.1135/css199902306.

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Kovacheva, Yana S., Svetomir B. Tzokov, Iain A. Murray, and Jane A. Grasby. "Kinetic studies of the Neurospora VS ribozyme." In XIIth Symposium on Chemistry of Nucleic Acid Components. Institute of Organic Chemistry and Biochemistry, Academy of Sciences of the Czech Republic, 2002. http://dx.doi.org/10.1135/css200205352.

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Zhu, Xiao-Gang, Shi-ying Zheng, Dong Jiang, and Jin-feng Ge. "Cardiomyocyte Apoptosis Were Inhibited by Anti-Fas Ribozyme." In 2010 4th International Conference on Bioinformatics and Biomedical Engineering (iCBBE). IEEE, 2010. http://dx.doi.org/10.1109/icbbe.2010.5514718.

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Welz, Rüdiger, Beate Scholz, Christian Schmidt, and Sabine Müller. "The hairpin ribozyme as a three-way junction." In XIth Symposium on Chemistry of Nucleic Acid Components. Institute of Organic Chemistry and Biochemistry, Academy of Sciences of the Czech Republic, 1999. http://dx.doi.org/10.1135/css199902331.

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YORK, DARRIN M. "CATALYTIC STRATEGIES OF NUCLEOLYTIC RIBOZYMES." In 24th International Solvay Conference on Chemistry. WORLD SCIENTIFIC, 2018. http://dx.doi.org/10.1142/9789813237179_0047.

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BEVILACQUA, PHILIP C., JAMIE L. BINGAMAN, ERICA A. FRANKEL, KYLE J. MESSINA, and DANIEL D. SEITH. "KEY CATALYTIC STRATEGIES OF RIBOZYMES." In 24th International Solvay Conference on Chemistry. WORLD SCIENTIFIC, 2018. http://dx.doi.org/10.1142/9789813237179_0048.

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Wüthrich, Kurt, R. H. Grubbs, T. Visart de Bocarmé, and Anne De Wit. "Catalysis by Ribozymes in Molecular Machines." In 24th International Solvay Conference on Chemistry. WORLD SCIENTIFIC, 2018. http://dx.doi.org/10.1142/9789813237179_others06.

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Reports on the topic "Ribozym"

1

Pitha-Rowe, Paula Marie. Ribozyme-Mediated Breast Cancer Gene Therapy. Defense Technical Information Center, 2000. http://dx.doi.org/10.21236/ada394199.

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Pitha-Rowe, Paula M., Lesia Dropulic, and Boro Dropulic. Ribozyme-Mediated Breast Cancer Gene Therapy. Defense Technical Information Center, 2002. http://dx.doi.org/10.21236/ada407229.

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Tang, Careen K. Ribozyme Targeting the Novel Fusion Junction of EGFRvIII in Breast Cancer. Defense Technical Information Center, 2003. http://dx.doi.org/10.21236/ada418630.

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Tang, Careen. Ribozyme Targeting the Novel Fusion Junction of EGFRvIII in Breast Cancer. Defense Technical Information Center, 2000. http://dx.doi.org/10.21236/ada391016.

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Hnatyszyn, Harry, and Gunter K. Kraus. Design of a Ribozyme to Inactive Telomerase Activity in Breast Tumors. Defense Technical Information Center, 1999. http://dx.doi.org/10.21236/ada391356.

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Sullenger, Bruce A. Ribozyme-Mediated Repair of Mutant p53 Transcripts in Breast Cancer Cells. Defense Technical Information Center, 2000. http://dx.doi.org/10.21236/ada392417.

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Poletti, Patrick. The Effect of Dynamic Kinetic Selection on an Evolving Ribozyme Population. Portland State University Library, 2000. http://dx.doi.org/10.15760/etd.6689.

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Satterwhite, Elizabeth. Ribozyme/Duplex Binding Interactions as a Thermodynamic Basis for Chemical Game Theory. Portland State University Library, 2016. http://dx.doi.org/10.15760/honors.311.

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Hnatyszyn, Harry J., and Gunter Kraus. Design of a Ribozyme to Inactivate Telomerase Activity in Breast Cancer Tumors. Defense Technical Information Center, 2000. http://dx.doi.org/10.21236/ada392898.

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Diaz Arenas, Carolina. Evolutionary Dynamics in Molecular Populations of Ligase Ribozymes. Portland State University Library, 2000. http://dx.doi.org/10.15760/etd.44.

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