Relevant bibliographies by topics / RNA: DNA hybrides

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Academic literature on the topic 'RNA: DNA hybrides'

Author: Grafiati
Published: 25 May 2024

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Journal articles on the topic "RNA: DNA hybrides"

1

Yang, Xuan, Binyuan Zhai, Shunxin Wang, et al. "RNA-DNA hybrids regulate meiotic recombination." Cell Reports 37, no. 10 (2021): 110097. http://dx.doi.org/10.1016/j.celrep.2021.110097.

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2

Kamath-Loeb, Ashwini S., Amnon Hizi, John Tabone, Marjorie S. Solomon, and Lawrence A. Loeb. "Inefficient Repair of RNA . DNA Hybrids." European Journal of Biochemistry 250, no. 2 (1997): 492–501. http://dx.doi.org/10.1111/j.1432-1033.1997.0492a.x.

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3

Waldron, Denise. "RNA–DNA hybrids: double-edged swords." Nature Reviews Genetics 18, no. 1 (2016): 3. http://dx.doi.org/10.1038/nrg.2016.153.

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4

Hall, Kathleen B. "NMR spectroscopy of DNA/RNA hybrids." Current Opinion in Structural Biology 3, no. 3 (1993): 336–39. http://dx.doi.org/10.1016/s0959-440x(05)80103-4.

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5

Kim, Joung Sug, Junghyun Park, Jang Hyeon Choi, Seungjae Kang, and Nokyoung Park. "RNA–DNA hybrid nano-materials for highly efficient and long lasting RNA interference effect." RSC Advances 13, no. 5 (2023): 3139–46. http://dx.doi.org/10.1039/d2ra06249f.

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A new RNAi approach was developed using an X-RDNA and Ri-Dgel. The nanostructured materials of dsRNA–DNA hybrids showed higher efficient and longer lasting RNA interference effect compared with conventional dsRNA.
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6

Di, Lin, Yusi Fu, Yue Sun, et al. "RNA sequencing by direct tagmentation of RNA/DNA hybrids." Proceedings of the National Academy of Sciences 117, no. 6 (2020): 2886–93. http://dx.doi.org/10.1073/pnas.1919800117.

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Transcriptome profiling by RNA sequencing (RNA-seq) has been widely used to characterize cellular status, but it relies on second-strand complementary DNA (cDNA) synthesis to generate initial material for library preparation. Here we use bacterial transposase Tn5, which has been increasingly used in various high-throughput DNA analyses, to construct RNA-seq libraries without second-strand synthesis. We show that Tn5 transposome can randomly bind RNA/DNA heteroduplexes and add sequencing adapters onto RNA directly after reverse transcription. This method, Sequencing HEteRo RNA-DNA-hYbrid (SHERRY), is versatile and scalable. SHERRY accepts a wide range of starting materials, from bulk RNA to single cells. SHERRY offers a greatly simplified protocol and produces results with higher reproducibility and GC uniformity compared with prevailing RNA-seq methods.
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7

Paull, Tanya T. "RNA–DNA hybrids and the convergence with DNA repair." Critical Reviews in Biochemistry and Molecular Biology 54, no. 4 (2019): 371–84. http://dx.doi.org/10.1080/10409238.2019.1670131.

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8

Huang, Yuegao, Congju Chen, and Irina M. Russu. "Structural Energetics of Two RNA-DNA Hybrids." Biophysical Journal 96, no. 3 (2009): 578a. http://dx.doi.org/10.1016/j.bpj.2008.12.3022.

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9

Vydzhak, Olga, Brian Luke, and Natalie Schindler. "Non-coding RNAs at the Eukaryotic rDNA Locus: RNA–DNA Hybrids and Beyond." Journal of Molecular Biology 432, no. 15 (2020): 4287–304. http://dx.doi.org/10.1016/j.jmb.2020.05.011.

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10

Aguilera, Andrés, and Belén Gómez-González. "DNA–RNA hybrids: the risks of DNA breakage during transcription." Nature Structural & Molecular Biology 24, no. 5 (2017): 439–43. http://dx.doi.org/10.1038/nsmb.3395.

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