Relevant bibliographies by topics / Sequencing method

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  1. Journal articles
  2. Dissertations / Theses
  3. Books
  4. Book chapters
  5. Conference papers
  6. Reports

Academic literature on the topic 'Sequencing method'

Author: Grafiati
Published: 4 June 2021
Last updated: 9 February 2022

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Journal articles on the topic "Sequencing method"

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Ronaghi, M. "DNA SEQUENCING:A Sequencing Method Based on Real-Time Pyrophosphate." Science 281, no. 5375 (1998): 363–65. http://dx.doi.org/10.1126/science.281.5375.363.

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CRAXTON, M. "Linear amplification sequencing, a powerful method for sequencing DNA." Methods 3, no. 1 (1991): 20–26. http://dx.doi.org/10.1016/s1046-2023(05)80159-8.

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Huang, Zheng, Qibin Li, Wei Jin, Qijun Liao, and Xiao Sun. "A Novel Method for Detecting Contaminated Sample Based on Illumina Sequencing Data." International Journal of Bioscience, Biochemistry and Bioinformatics 4, no. 2 (2014): 116–20. http://dx.doi.org/10.7763/ijbbb.2014.v4.322.

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Nestorova, Gergana G., and Eric J. Guilbeau. "Thermoelectric method for sequencing DNA." Lab on a Chip 11, no. 10 (2011): 1761. http://dx.doi.org/10.1039/c0lc00733a.

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Gharizadeh, Baback, Mehran Ghaderi, Declan Donnelly, Bahram Amini, Keng-Ling Wallin, and Pål Nyrén. "Multiple-primer DNA sequencing method." ELECTROPHORESIS 24, no. 78 (2003): 1145–51. http://dx.doi.org/10.1002/elps.200390147.

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Esfandyarpour, Hesaam, R. Fabian W. Pease, and Ronald W. Davis. "Picocalorimetric method for DNA sequencing." Journal of Vacuum Science & Technology B: Microelectronics and Nanometer Structures 26, no. 2 (2008): 661. http://dx.doi.org/10.1116/1.2897322.

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Sasaki, N., M. Izawa, M. Watahiki, et al. "Transcriptional sequencing: A method for DNA sequencing using RNA polymerase." Proceedings of the National Academy of Sciences 95, no. 7 (1998): 3455–60. http://dx.doi.org/10.1073/pnas.95.7.3455.

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Obata, Hiroko, Tatsuya Tanaka, Tsuneko Fujii, Chikako Sasho, Yukihiro Yamaguchi, and Keiichiro Suzuki. "Dye Terminator Re-cycle-sequencing Method: Phage Plaque Direct Sequencing." Analytical Biochemistry 297, no. 1 (2001): 102–5. http://dx.doi.org/10.1006/abio.2001.5328.

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KRASNENKO, A. Y., I. F. STETSENKO, A. S. RAKITKO, A. V. CHUROV, and V. V. ILINSKII. "ULTRALOW COVERAGE SEQUENCING IS THE MOST ACCURATE LIBRARY QUANTIFICATION METHOD PRIOR TO EXOME SEQUENCING." Periódico Tchê Química 16, no. 32 (2019): 1010–16. http://dx.doi.org/10.52571/ptq.v16.n32.2019.1027_periodico32_pgs_1010_1016.pdf.

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Accurate DNA library quantification is very important in post-pooling captured exome sequencing. Underrepresented libraries will need additional sequencing, which takes extra time and money, whereas overexpressed DNA libraries can lead to the generation of more data than required, which leads to the waste of sequence capacity and a reduced number of samples per batch. There is a number of methods available to quantify DNA libraries prior to sequencings, such as UV absorption, use of intercalating dyes, capillary electrophoresis, 5’-hydrolysis probes (TaqMan©) coupled with quantitative PCR (qPC
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Kubát, Z. "Chromosome walking with BAC clones as a method of genome mapping." Plant, Soil and Environment 53, No. 10 (2008): 447–50. http://dx.doi.org/10.17221/2198-pse.

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Current sequencing projects are often based on random sequencing of genomic libraries followed by contig assembly by means of bioinformatics tools. This approach is convenient for whole genome sequencing projects. Chromosome walking described here is suitable for mapping and sequencing of short genomic regions in species where whole genome sequencing is not possible or for cloning gene from its closest known marker. This method is based on searching for overlapping BAC clones specific for the genomic region of interest.
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Dissertations / Theses on the topic "Sequencing method"

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Massaro, James. "A PCA based method for image and video pose sequencing /." Online version of thesis, 2010. http://hdl.handle.net/1850/11991.

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Guldbrand, Linnea. "Development of a massive parallel sequencing method for population genetics, for the sequencing of 1000 dog mitochondrial genomes per Miseq run." Thesis, KTH, Skolan för bioteknologi (BIO), 2016. http://urn.kb.se/resolve?urn=urn:nbn:se:kth:diva-190601.

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Bender, R. Hugh F. "A method for identifying ribosome pause sites in messenger RNA through new sequencing technology." Winston-Salem, NC : Wake Forest University, 2009. http://dspace.zsr.wfu.edu/jspui/handle/10339/44684.

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Calus, Szymon Tomasz. "Evaluation of nanopore-based sequencing technology for gene marker based analysis of complex microbial communities : method development for accurate 16S rRNA gene amplicon sequencing." Thesis, University of Glasgow, 2018. http://theses.gla.ac.uk/41086/.

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Nucleic acid sequencing can provide a detailed overview of microbial communities in comparison with standard plate-culture methods. Expansion of high-throughput sequencing (HTS) technologies and reduction in analysis costs has allowed for detailed exploration of various habitats with use of amplicon, metagenomics, and metatranscriptomics approaches. However, due to a capital cost of HTS platforms and requirements for batch analysis, genomics-based studies are still not being used as a standard method for the comprehensive examination of environmental or clinical samples for microbial character
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Gharizadeh, Baback. "Method development and applications of Pyrosequencing technology." Doctoral thesis, KTH, Biotechnology, 2003. http://urn.kb.se/resolve?urn=urn:nbn:se:kth:diva-3645.

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<p>The ability to determine nucleic acid sequences is one ofthe most important platforms for the detailed study ofbiological systems. Pyrosequencing technology is a relativelynovel DNA sequencing technique with multifaceted uniquecharacteristics, adjustable to different strategies, formatsand instrumentations. The aims of this thesis were to improvethe chemistry of the Pyrosequencing technique for increasedread-length, enhance the general sequence quality and improvethe sequencing performance for challenging templates. Improvedchemistry would enable Pyrosequencing technique to be used fornumer
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Fritsch, Leonie Verfasser], Rainer [Akademischer Betreuer] [Fischer, and Björn [Akademischer Betreuer] Usadel. "Next-generation sequencing-based amplicon sequencing is a novel method for the detection of breeding relevant traits in barley (Hordeum vulgare) / Leonie Fritsch ; Rainer Fischer, Björn Usadel." Aachen : Universitätsbibliothek der RWTH Aachen, 2016. http://d-nb.info/1156922313/34.

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Fritsch, Leonie [Verfasser], Rainer [Akademischer Betreuer] Fischer, and Björn [Akademischer Betreuer] Usadel. "Next-generation sequencing-based amplicon sequencing is a novel method for the detection of breeding relevant traits in barley (Hordeum vulgare) / Leonie Fritsch ; Rainer Fischer, Björn Usadel." Aachen : Universitätsbibliothek der RWTH Aachen, 2016. http://d-nb.info/1156922313/34.

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Burseth, Daniel. "A method for selecting and sequencing enterprise software to improve high-volume new product introduction performance." Thesis, Massachusetts Institute of Technology, 2015. http://hdl.handle.net/1721.1/98977.

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Thesis: M.B.A., Massachusetts Institute of Technology, Sloan School of Management, 2015. In conjunction with the Leaders for Global Operations Program at MIT.<br>Thesis: S.M., Massachusetts Institute of Technology, Engineering Systems Division, 2015. In conjunction with the Leaders for Global Operations Program at MIT.<br>Cataloged from PDF version of thesis.<br>Includes bibliographical references (pages 55-56).<br>Powerful software exists to help consumer electronics enterprises manage complex product lifecycles and improve the speed with which they introduce new products to the market. While
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Velikkakam, James Geo [Verfasser], and George [Akademischer Betreuer] Coupland. "Method development and application of Next Generation Sequencing in forward genetics / Geo Velikkakam James. Gutachter: George Coupland." Köln : Universitäts- und Stadtbibliothek Köln, 2014. http://d-nb.info/1066718970/34.

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Hedberg, Lilia. "Identification of obesity-associated SNPs in the human genome : Method development and implementation for SOLiD sequencing data analysis." Thesis, Linköpings universitet, Institutionen för klinisk och experimentell medicin, 2010. http://urn.kb.se/resolve?urn=urn:nbn:se:liu:diva-57932.

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Over the last few years, genome-wide association studies (GWAS) have been used to identify numerous obesity associated SNPs in the human genome. By using linkage studies, candidate obesity genes have been identified. When SNPs in the first intron of FTO were found to be associated to BMI, it became the first gene to be linked to common obesity. In order to look for causative explanations behind the associated SNPs, a re-sequencing of FTO had been performed on the SOLiD sequencing platform. In-house candidate gene, SLCX, was also sequenced in order to evaluate a potential obesity association. T
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Books on the topic "Sequencing method"

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Lindamood, Patricia C. The Lindamood phoneme sequencing program for reading, spelling, and speech: LiPS : teacher's manual for the classroom and clinic. 3rd ed. Pro-Ed, 1998.

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Munshi, Anjana. DNA sequencing: Methods and applications. InTech, 2012.

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Alphey, Luke. DNA sequencing from experimental methods to bioinformatics. Springer, 1997.

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Balancing and sequencing of assembly lines. 2nd ed. Physica-Verlag, 1999.

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High-throughput next generation sequencing: Methods and applications. Springer, 2011.

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Măndoiu, Ion, and Alexander Zelikovsky, eds. Computational Methods for Next Generation Sequencing Data Analysis. John Wiley & Sons, Inc., 2016. http://dx.doi.org/10.1002/9781119272182.

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Kahl, Günter, and Matthias Harbers. Tag-based next generation sequencing. Wiley-Blackwell, 2012.

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Neuman, Frank. Analysis of sequencing and scheduling methods for arrival traffic. National Aeronautics and Space Administration, Ames Research Center, 1990.

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Scholl, Armin. Balancing and sequencing of assembly lines. Physica-Verlag, 1995.

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Janitz, Michal. Next-generation genome sequencing: Towards personalized medicine. Wiley-VCH, 2008.

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Book chapters on the topic "Sequencing method"

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Dupont, David R., Sylvia W. Yuen, and Kenneth S. Graham. "Automated C-Terminal Protein Sequence Analysis Using the Alkylated-Thiohydantoin Method." In Protein Sequencing Protocols. Humana Press, 2003. http://dx.doi.org/10.1385/1-59259-342-9:319.

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Plessy, Charles. "RACE: New Applications of an Old Method to Connect Exons." In Tag-Based Next Generation Sequencing. Wiley-VCH Verlag GmbH & Co. KGaA, 2012. http://dx.doi.org/10.1002/9783527644582.ch4.

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Walker, John M. "The Dansyl-Edman Method for Peptide Sequencing." In Springer Protocols Handbooks. Humana Press, 1996. http://dx.doi.org/10.1007/978-1-60327-259-9_90.

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Walker, John M. "The Dansyl-Edman Method for Peptide Sequencing." In Springer Protocols Handbooks. Humana Press, 1986. http://dx.doi.org/10.1007/978-1-60327-405-0_19.

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Quispe-Tintaya, Wilber, Ryan R. White, Vasily N. Popov, Jan Vijg, and Alexander Y. Maslov. "Rapid Mitochondrial DNA Isolation Method for Direct Sequencing." In Methods in Molecular Biology. Springer New York, 2015. http://dx.doi.org/10.1007/978-1-4939-2257-4_9.

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Morf, Jörg, and Steven W. Wingett. "Proximity : A Sequencing Method to Identify Co-localization of." In Methods in Molecular Biology. Springer US, 2020. http://dx.doi.org/10.1007/978-1-0716-0680-3_13.

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Takamoto, K., M. Kamo, K. Satake, and A. Tsugita. "A C-Terminal Sequencing Method Using Perfluoroacyl Anhydrides Vapor." In Methods in Protein Structure Analysis. Springer US, 1995. http://dx.doi.org/10.1007/978-1-4899-1031-8_9.

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Wang, Xiao-yan, Guo-hui Wei, Zheng-wei Gu, Ming Li, and Jin-gang Ma. "Multiple Frame CT Image Sequencing Big Data Batch Clustering Method." In Lecture Notes of the Institute for Computer Sciences, Social Informatics and Telecommunications Engineering. Springer International Publishing, 2020. http://dx.doi.org/10.1007/978-3-030-51100-5_34.

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Griffiths, Gillian M., Claudia Berek, Matti Kaartinen, and Cesar Milstein. "Dideoxy mRNA Sequencing as a Method to Analyze Antibody Diversity." In Investigation and Exploitation of Antibody Combining Sites. Springer US, 1985. http://dx.doi.org/10.1007/978-1-4684-5006-4_17.

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Li, Jia Wen, Shovan Barma, Sio Hang Pun, et al. "Initial Study of Emotion Recognition Using Brain Rhythm Sequencing Method." In IFMBE Proceedings. Springer International Publishing, 2021. http://dx.doi.org/10.1007/978-3-030-66169-4_29.

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Conference papers on the topic "Sequencing method"

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Geng, Yu, Zhongmeng Zhao, Zhaofang Du, et al. "A crowdsourcing method for correcting sequencing errors for the third-generation sequencing data." In 2017 IEEE International Conference on Bioinformatics and Biomedicine (BIBM). IEEE, 2017. http://dx.doi.org/10.1109/bibm.2017.8217903.

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Sen, Chiradeep, Farhad Ameri, and Joshua D. Summers. "Entropic Method for Sequencing Discrete Design Decisions." In ASME 2009 International Design Engineering Technical Conferences and Computers and Information in Engineering Conference. ASMEDC, 2009. http://dx.doi.org/10.1115/detc2009-87600.

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Early stages of engineering design processes are characterized by high levels of uncertainty due to incomplete knowledge. As the design progresses, additional information is externally added or internally generated within the design process. As a result, the design solution becomes increasingly well-defined and the uncertainty of the problem reduces, diminishing to zero at the end of the process when the design is fully defined. In this research a measure of uncertainty is proposed for a class of engineering design problems called discrete design problems. Previously, three components of compl
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Putnam, Emily, Lam Nguyen, Hunter Chung, et al. "Abstract 2956: A targeted bisulfite sequencing method combining microfluidics-based PCR with Next-Gen sequencing." In Proceedings: AACR 106th Annual Meeting 2015; April 18-22, 2015; Philadelphia, PA. American Association for Cancer Research, 2015. http://dx.doi.org/10.1158/1538-7445.am2015-2956.

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de-Marcos, Luis, Jose J. Martinez, Jose A. Gutierrez, Roberto Barchino, and Jose M. Gutierrez. "A new sequencing method in Web-based education." In 2009 IEEE Congress on Evolutionary Computation (CEC). IEEE, 2009. http://dx.doi.org/10.1109/cec.2009.4983352.

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Shindyalov, I. N., V. B. Streletc, N. A. Kolchanov, et al. "A METHOD FOR JOINING CONTIGS IN AUTOMATIC DNA SEQUENCING." In Proceedings of the 2nd International Conference. WORLD SCIENTIFIC, 1993. http://dx.doi.org/10.1142/9789814503655_0033.

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Feng, Weixing, Dingkai Xue, Fengfei Song, Duojiao Chen, Ziwei Li, and Xueying Wang. "A method for homopolymer length discrimination in ion torrent sequencing." In 2015 34th Chinese Control Conference (CCC). IEEE, 2015. http://dx.doi.org/10.1109/chicc.2015.7260992.

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Liu, Xinhua, Zhuangzhi Sun, Chun-Fu Shao, Chun-Jiao Dong, and Chengxiang Zhuge. "Method and Practice about Sequencing the Urban Rail Transit Construction." In 2010 International Conference on Future Power and Energy Engineering (ICFPEE2010). IEEE, 2010. http://dx.doi.org/10.1109/icfpee.2010.20.

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Currie, William S. "GCODE: A method to exploit rapid sequencing of seismic sources." In SEG Technical Program Expanded Abstracts 1991. Society of Exploration Geophysicists, 1991. http://dx.doi.org/10.1190/1.1888903.

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Wang, Luotong, Li Qu, Longshu Yang, Yiying Wang, and Huaiqiu Zhu. "An Error Correction Method of Nanopore Sequencing Data Using Deep Learning." In 2020 13th International Congress on Image and Signal Processing, BioMedical Engineering and Informatics (CISP-BMEI). IEEE, 2020. http://dx.doi.org/10.1109/cisp-bmei51763.2020.9263622.

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Li Li, Pan Gu, Fei Qiao, and Ying Wu. "A TOC combining ACO sequencing method for the semiconductor manufacturing fabrication." In 2010 8th World Congress on Intelligent Control and Automation (WCICA 2010). IEEE, 2010. http://dx.doi.org/10.1109/wcica.2010.5554196.

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Reports on the topic "Sequencing method"

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Crkvenjakov, R., and R. Drmanac. Sequencing of megabase plus DNA by hybridization: Method development ENT. Final technical progress report. Office of Scientific and Technical Information (OSTI), 1991. http://dx.doi.org/10.2172/10143707.

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Libray, Spring. The Booming Field of Epitranscriptomics and its Role in Human Disease. Spring Library, 2021. http://dx.doi.org/10.47496/sl.blog.26.

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Currently, the detection techniques used for transcriptome-wide identification of chemical modifications mainly depend on chemical and antibody-based detection methods followed by sequencing analysis.
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Hicks, Julie, Laurin Yates, and Jackie Pettway. Mat Sinking Unit supply study : Mississippi River revetment. Engineer Research and Development Center (U.S.), 2021. http://dx.doi.org/10.21079/11681/41867.

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The Mississippi Valley Division (MVD) has maintained the Mississippi River banks for over 80 years. The Mat Sinking Unit (MSU), built in 1946, was considered state-of-the-art at the time. This system is still in operation today and has placed over 1,000 miles of Articulated Concrete Mats along the Mississippi River from Head of Passes, LA, to Cairo, IL. A new MSU has been designed and is expected to be fully mission capable and operational by the 2023 season, which is expected to increase the productivity from 2,000 squares/day up to 8,000 squares/day with double shifts and optimal conditions.
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Hart, Carl R., and Gregory W. Lyons. A Measurement System for the Study of Nonlinear Propagation Through Arrays of Scatterers. Engineer Research and Development Center (U.S.), 2020. http://dx.doi.org/10.21079/11681/38621.

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Various experimental challenges exist in measuring the spatial and temporal field of a nonlinear acoustic pulse propagating through an array of scatterers. Probe interference and undesirable high-frequency response plague typical approaches with acoustic microphones, which are also limited to resolving the pressure field at a single position. Measurements made with optical methods do not have such drawbacks, and schlieren measurements are particularly well suited to measuring both the spatial and temporal evolution of nonlinear pulse propagation in an array of scatterers. Herein, a measurement
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[Sequencing by hybridization methods to generate large arrays of oligonucleotides]. Final technical report. Office of Scientific and Technical Information (OSTI), 1996. http://dx.doi.org/10.2172/639709.

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