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Journal articles on the topic 'Simiiformes'

Author: Grafiati

Published: 5 June 2025

Last updated: 15 July 2025

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1

Shao, Yong, Long Zhou, Fang Li, et al. "Phylogenomic analyses provide insights into primate evolution." Science 380, no. 6648 (2023): 913–24. http://dx.doi.org/10.1126/science.abn6919.

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Comparative analysis of primate genomes within a phylogenetic context is essential for understanding the evolution of human genetic architecture and primate diversity. We present such a study of 50 primate species spanning 38 genera and 14 families, including 27 genomes first reported here, with many from previously less well represented groups, the New World monkeys and the Strepsirrhini. Our analyses reveal heterogeneous rates of genomic rearrangement and gene evolution across primate lineages. Thousands of genes under positive selection in different lineages play roles in the nervous, skele

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2

Duque Osorio, Juan Fernando. "DESCRIPCIÓN DE LA ESTRUCTURA INTERNA DEL MESENCÉFALO DE AOTUS (PRIMATES: SIMIIFORMES: AOTIDAE) CON REFERENCIA A HOMO (PRIMATES: SIMIIFORMES: HOMINIDAE): POSIBLES IMPLICACIONES EN LA EVOLUCIÓN DE LOS CICLOS CIRCADIANOS DE MAMÍFEROS." Revista de la Academia Colombiana de Ciencias Exactas, Físicas y Naturales 33, no. 128 (2023): 425–44. http://dx.doi.org/10.18257/raccefyn.33(128).2009.2374.

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No se cuenta con descripciones de la estructura interna del MC del único primate simiiforme (antropoideo) nocturno, Aotus. Dado que el MC es importante en la regulación del sueño, se evaluó esta estructura en Aotus, con una técnica histológica y otra Inmunohistoquímica. El MC de Aotus y Homo contienen esencialmente los mismos elementos grises y blancos. Con la técnica Inmunohistoquímica para Serotonina, se encontró un posible núcleo serotoninérgico nuevo (NN?) para el MC de Aotus, que no ha sido descrito en el MC humano. Teniendo en cuenta las relaciones que tendría el NN? con estructuras comp

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3

Matsuzawa, Ayumi, Jiyoung Lee, So Nakagawa, et al. "HERV-Derived Ervpb1 Is Conserved in Simiiformes, Exhibiting Expression in Hematopoietic Cell Lineages Including Macrophages." International Journal of Molecular Sciences 22, no. 9 (2021): 4504. http://dx.doi.org/10.3390/ijms22094504.

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(1) Background: The ERVPb1 gene in humans is derived from an envelope (Env) gene of a human endogenous retrovirus group, HERV-P(b). The ERVPb1 gene reportedly has a conserved open reading frame (ORF) in Old World monkeys. Although its forced expression led to cell-fusion in an ex vivo cell culture system, like other Env-derived genes such as syncytin-1 and -2, its mRNA expression is not placenta-specific, but almost ubiquitous, albeit being quite low in human tissues and organs, implying a distinct role for ERVPb1. (2) Methods: To elucidate the cell lineage(s) in which the ERVPb1 protein is tr

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4

Rosenberger, Alfred L. "Protoanthropoidea (Primates, Simiiformes): A New Primate Higher Taxon and a Solution to the Rooneyia Problem." Journal of Mammalian Evolution 13, no. 2 (2006): 139–46. http://dx.doi.org/10.1007/s10914-006-9009-3.

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5

Hasanah, Rizka, Titin Purnaningsih, Rahayu Opi Anggoro, Decenly, and Randy Syafutra. "Long-tailed Macaques Macaca fascicularis (Simiiformes: Cercopithecidae) Coexistence with Settlements in the Nyaru Menteng Arboretum Area, Central Kalimantan." BIO PALEMBANICA 2, no. 1 (2025): 66–71. https://doi.org/10.36982/bio.v2i1.5529.

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The Nyaru Menteng Arboretum area in Central Kalimantan serves as a habitat for approximately 200 Long-Tailed Macaques Macaca fascicularis within its 65.2-hectare area, as recorded in 2024. A lack of food causes presumed M. fascicularis to descend to settlements in search of food, resulting in losses for the people of Nyaru Menteng Arboretum which leads to coexistence. This study aims to identify the types of coexistences that occur between M. fascicularis and villagers. The method used to identify coexistences is a survey method. The survey results explain that the types of coexistences that o

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6

Heymann, Eckhard W. "On the identity of the tamarin AMNH 98303 (“<i>Saguinus fuscicollis tripartitus</i>”; Primates: Haplorrhini: Simiiformes: Platyrrhini: Callitrichidae)." Primate Biology 9, no. 1 (2022): 1–4. http://dx.doi.org/10.5194/pb-9-1-2022.

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Abstract. The American Museum of Natural History houses the skin of a tamarin (AMNH 98303) labelled as Saguinus fuscicollis tripartitus. However, the specimen does not match the phenotype of this taxon, now named Leontocebus tripartitus, nor that of any other known species or subspecies of Leontocebus. In this note, we review past taxonomic revisions of the genus Saguinus – revisions that were largely driven by the contentious species or subspecies status of the golden-mantled saddleback tamarin S. fuscicollis tripartitus – and compare the phenotype of AMNH 98303 with those of other tamarins i

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7

Widyastuti, Salmah, Dyah Perwitasari-Farajallah, Entang Iskandar, et al. "Population of the Javan Gibbon (Hylobates moloch) in the Dieng Mountains, Indonesia: An updated estimation from a new approach." Biodiversity Data Journal 11 (July 4, 2023): e100805. https://doi.org/10.3897/BDJ.11.e100805.

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The Javan gibbon (<i>Hylobates moloch</i>) is endemic to the island of Java and its distribution is restricted from the western tip of Java to the Dieng Mountains in Central Java. Unlike the other known habitats that hold a large population of Javan gibbons, the Dieng Mountains have not been protected and experience various threats. This study, which was conducted in 2018 and 2021, aimed to provide an update of the current density and population size of Javan gibbons in Dieng after the most recent study in 2010 and to investigate their relationships with habitat characteristics (vegetation and

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8

Gani, Millawati, Jeffrine J. Rovie-Ryan, Frankie Thomas Sitam, et al. "Taxonomic and genetic assessment of captive White-Handed Gibbons (Hylobates lar) in Peninsular Malaysia with implications towards conservation translocation and reintroduction programmes." ZooKeys 1076 (December 8, 2021): 25–41. https://doi.org/10.3897/zookeys.1076.73262.

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Conservation translocation and reintroduction for the purpose of repopulating and reinforcing extirpated or depleted populations has been recognised as an important conservation tool, particularly for gibbon conservation in the immediate future. Feasibility assessments involving multiple factors, including taxonomic and genetic assessment of rescued and captive gibbons, are imperative prior to translocation and reintroduction programmes. In this study, we attempt to determine the subspecies and origin of captive Hylobates lar, White-handed gibbons, from Peninsular Malaysia to assist in future

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9

Sariyati, Nur Hartini, Muhammad Abu Bakar Abdul-Latiff, Nor Rahman Aifat, et al. "Molecular phylogeny confirms the subspecies delineation of the Malayan Siamang (Symphalangus syndactylus continentis) and the Sumatran Siamang (Symphalangus syndactylus syndactylus) based on the hypervariable region of mitochondrial DNA." Biodiversity Data Journal 12 (April 25, 2024): e120314. https://doi.org/10.3897/BDJ.12.e120314.

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Siamangs (<i>Symphalangus syndactylus</i>) are native to Peninsular Malaysia, Sumatra and southern Thailand and their taxonomical classification at subspecies level remains unclear. Morphologically, two subspecies were proposed as early as 1908 by Thomas namely <i>Symphalangus</i> <i>s. syndactylus</i> and <i>Symphalangus s. continentis.</i> Thus, this study aims to clarify the Siamang subspecies status, based on mtDNA <i>D</i>-loop sequences. Faecal samples were collected from wild Siamang populations at different localities in Peninsular Malaysia. A 600-bp sequence of the mitochondrial <i>D<

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10

Leyva-Hernández, Sandra, Ricardo Fong-Zazueta, Luis Medrano-González, and Ana Julia Aguirre-Samudio. "The evolution of brain size among the Homininae and selection at ASPM and MCPH1 genes." Biosis: Biological Systems 2, no. 2 (2021): 293–310. http://dx.doi.org/10.37819/biosis.002.02.0104.

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We examined the evolutionary relationship of the ASPM (abnormal spindle-like microcephaly associated) and MCPH1 (microcephalin-1) genes with brain volume among humans and other primates. We obtained sequences of these genes from 14 simiiform species including hominins. Two phylogenetic analyses of ASPM exon 3 and MCPH1 exons 8 and 11 were performed to maximize taxon sampling or sequence extension to compare the nucleotide substitution and encephalization rates, and examine signals of selection. Further assessment of selection among humans was done through the analysis of non-synonymous and syn

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11

Marivaux, Laurent, El Mabrouk Essid, Wissem Marzougui, et al. "A morphological intermediate between eosimiiform and simiiform primates from the late middle Eocene of Tunisia: Macroevolutionary and paleobiogeographic implications of early anthropoids." American Journal of Physical Anthropology 154, no. 3 (2014): 387–401. http://dx.doi.org/10.1002/ajpa.22523.

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12

Nur-Aizatul, Tukiman, Abd Rahman Mohd-Ridwan, Mohammad Noor-Faezah, et al. "Preliminary assessment of group composition and activity pattern of the critically endangered Bornean Banded Langur Presbytis chrysomelas chrysomelas in Tanjung Datu National Park." Biodiversity Data Journal 12 (June 24, 2024): e124196. https://doi.org/10.3897/BDJ.12.e124196.

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The Bornean banded langur (<i>Presbytis chrysomelas chrysomelas</i>) is critically endangered species primarily found in Sarawak, Malaysia. Albeit this species is in peril, the ecology knowledge of this endemic species of Borneo is still scarce. Thus, a rapid survey employing total count and scan sampling method was conducted between July to August 2023 at Tanjung Datu National Park (TDNP), Sarawak to observe the social interaction of species with the environment. The behaviour of langur was recorded by employing scanning sampling method at 10 minutes intervals. This study sought to provide pr

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13

Osman, Nur Azimah, Muhammad Abu Bakar Abdul-Latiff, Abd Rahman Mohd-Ridwan, Salmah Yaakop, Kayal Vizi Karuppannan, and Badrul Munir Md-Zain. "Metabarcoding data analysis revealed the plant dietary variation of long-tailed macaque Macaca fascicularis (Cercopithecidae, Cercopithecinae) living in disturbed habitats in Peninsular Malaysia." Biodiversity Data Journal 10 (September 27, 2022): e89617. https://doi.org/10.3897/BDJ.10.e89617.

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The long-tailed macaque (<i>Macaca fascicularis</i>) has a wide range in both Peninsular Malaysia and Borneo. Although the primates are especially vulnerable to habitat alterations, this primate lives in disturbed habitats due to human-induced land-use. Thus, this study presents a faecal metabarcoding approach to clarify the plant diet of long-tailed macaques from five locations in Peninsular Malaysia to represent fragmented forest, forest edge, island and recreational park habitats. We extracted genomic DNA from 53 long-tailed macaque faecal samples. We found 47 orders, 126 families, 609 gene

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14

Van, Phung Khoa, Tran Dung Van, Dong Hai Thanh, Luu Vinh Quang, Bui Van Bac, and Vu Thinh Tien. "Changes in suitable habitat for the critically endangered Northern white-cheeked gibbon (Nomascus leucogenys) in the Western Nghe An Biosphere Reserve, Vietnam: Implication for conservation." Nature Conservation 51 (February 21, 2023): 167–88. https://doi.org/10.3897/natureconservation.51.90373.

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Several recent studies have highlighted that change in land use and land cover (LULC) is the main threat causing the decline and extinction of certain species. Gibbons (Hylobatidae) could be excellent examples, on account of their potential for extinction in the near future under the effects of LULC changes due to their particular ecological traits. This study aims to model the current suitable habitat of the Northern white-cheeked gibbon (Nomascus leucogenys (Ogilby, 1840)) in the Western Nghe An Biosphere Reserve (BR), Vietnam and assess the changes in its suitable habitat following the chan

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15

Tingga, Roberta Chaya Tawie, Jack Liam, Bilhan Deli, Mohd Luqman Anuar, Ahmad Ampeng, and Badrul Munir Md-Zain. "First DNA metabarcoding diet assessment on the critically endangered Tricolour Langur, Presbytis chrysomelas cruciger." Biodiversity Data Journal 12 (July 8, 2024): e124990. https://doi.org/10.3897/BDJ.12.e124990.

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<i>Presbytis chrysomelas cruciger</i> or also known as the Tricolour langur—is rare, endemic to Sarawak and Kalimantan in Borneo and classified as a critically endangered subspecies. The current <i>P. c. cruciger</i> population size is uncertain because the numbers are continuously decreasing. At present, there is no comprehensive scientific report on <i>P. c. cruciger</i> in Sarawak, although this subspecies is known to inhabit Maludam area. Recent first sighting of <i>P. c. cruciger</i> in Jemoreng Sarawak presents a research opportunity to study its feeding from a molecular ecology perspect

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16

Tingga, Roberta Chaya Tawie, Millawati Gani, Nur Azimah Osman, et al. "Interspecific variation in the diet of Symphalangus syndactylus and Macaca nemestrina at Genting Highlands, Pahang, Peninsular Malaysia." Biodiversity Data Journal 12 (May 22, 2024): e122453. https://doi.org/10.3897/BDJ.12.e122453.

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Primate communities in the Genting Highlands consist of a single species of Hylobatidae and four species of Cercopithecidae, which are known to exhibit social interaction behaviour. Thus, a study on the diets of <i>Symphalangus syndactylus</i> (siamang; family Hylobatidae) and <i>Macaca nemestrina</i> (pig-tailed macaque; family Cercopithecidae) was carried out at Genting Highlands, in order to compare the dietary preferences and interspecific competition between the two primate families. A DNA metabarcoding approach was used to analyse diet intake using non-invasive samples based on the trnL

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17

Craig, Jack M., Grace L. Bamba, Jose Barba-Montoya, S. Blair Hedges, and Sudhir Kumar. "Completing a molecular timetree of apes and monkeys." Frontiers in Bioinformatics 3 (December 15, 2023). http://dx.doi.org/10.3389/fbinf.2023.1284744.

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The primate infraorder Simiiformes, comprising Old and New World monkeys and apes, includes the most well-studied species on earth. Their most comprehensive molecular timetree, assembled from thousands of published studies, is found in the TimeTree database and contains 268 simiiform species. It is, however, missing 38 out of 306 named species in the NCBI taxonomy for which at least one molecular sequence exists in the NCBI GenBank. We developed a three-pronged approach to expanding the timetree of Simiiformes to contain 306 species. First, molecular divergence times were searched and found fo

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18

Zhuang, Xiao-Lin, Jin-Jin Zhang, Yong Shao, et al. "Integrative omics reveals rapidly evolving regulatory sequences driving primate brain evolution." Molecular Biology and Evolution, July 26, 2023. http://dx.doi.org/10.1093/molbev/msad173.

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Abstract Although continual expansion of the brain during primate evolution accounts for our enhanced cognitive capabilities, the drivers of brain evolution have scarcely been explored in these ancestral nodes. Here we performed large-scale comparative genomic, transcriptomic and epigenomic analyses to investigate the evolutionary alterations acquired by brain genes, and provide comprehensive listings of innovatory genetic elements along the evolutionary path from ancestral primates to human. The regulatory sequences associated with brain-expressed genes experienced rapid change, particularly

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19

Clemente, I. C., M. Pons�, M. Garc�a, and J. Egozcue. "Evolution of the Simiiformes and the phylogeny of human chromosomes." Human Genetics 84, no. 6 (1990). http://dx.doi.org/10.1007/bf00210798.

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20

Hu, Benxia, Xiao-Lin Zhuang, Long Zhou, Guojie Zhang, David N. Cooper, and Dong-Dong Wu. "Deciphering the role of rapidly evolving conserved elements in primate brain development and exploring their potential involvement in Alzheimer’s disease." Molecular Biology and Evolution, January 4, 2024. http://dx.doi.org/10.1093/molbev/msae001.

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Abstract Although previous studies have identified human-specific accelerated regions as playing a key role in the recent evolution of the human brain, the characteristics and cellular functions of rapidly evolving conserved elements (RECEs) in ancestral primate lineages remain largely unexplored. Here, based on large-scale primate genome assemblies, we identify 888 RECEs that have been highly conserved in primates that exhibit significantly accelerated substitution rates in the ancestor of the Simiiformes. This primate lineage exhibits remarkable morphological innovations, including an expand

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21

Vračko, Marjan, Subhash C. Basak, Dwaipayan Sen, and Ashesh Nandy. "Clustering of Zika viruses originating from different geographical regions using computational sequence descriptors." Current Computer-Aided Drug Design 16 (December 26, 2019). http://dx.doi.org/10.2174/1573409916666191226110936.

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: In this report we consider a data set, which consists of 310 Zika virus genome sequences taken from different continents, Africa, Asia and South America. The sequences, which were compiled from GenBank, were derived from the host cells of different mammalian species (Simiiformes, Aedes opok, Aedes africanus, Aedes luteocephalus, Aedes dalzieli, Aedes aegypti, and Homo sapiens). For chemometrical treatment the sequences have been represented by sequence descriptors derived from their graphs or neighborhood matrices. The set was analyzed with three chemometrical methods: Mahalanobis distances,

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22

Rojo, Daniela, Clara E. Hael, Agustina Soria, et al. "A mammalian tripartite enhancer cluster controls hypothalamic Pomc expression, food intake, and body weight." Proceedings of the National Academy of Sciences 121, no. 18 (2024). http://dx.doi.org/10.1073/pnas.2322692121.

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Food intake and energy balance are tightly regulated by a group of hypothalamic arcuate neurons expressing the proopiomelanocortin ( POMC) gene. In mammals, arcuate-specific POMC expression is driven by two cis -acting transcriptional enhancers known as nPE1 and nPE2. Because mutant mice lacking these two enhancers still showed hypothalamic Pomc mRNA, we searched for additional elements contributing to arcuate Pomc expression. By combining molecular evolution with reporter gene expression in transgenic zebrafish and mice, here, we identified a mammalian arcuate-specific Pomc enhancer that we n

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23

Recharte, Maribel, Phyllis C. Lee, Sarah‐Jane Vick, and Mark Bowler. "Polling the Public to Select Flagship Species for Tourism and Conservation—A ‘Big Five’ for the Peruvian Amazon?" Ecology and Evolution 15, no. 2 (2025). https://doi.org/10.1002/ece3.70983.

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ABSTRACTFlagship species are used to promote conservation and tourism. Africa's famous ‘Big five’ have become marketing flagships that fundraisers and tourism promoters emulate globally. Species can be selected systematically for marketing using characteristics such as colour, size or behaviour, but this approach can overlook unique animals or homogenise selections. Alternatively, polling the public can reveal existing preferences for animals directly. We used questionnaires with tourists in the Peruvian Amazon to identify existing biases for species and rank them for suitability for tourism a

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