Relevant bibliographies by topics / Sire genetics

Contents

  1. Journal articles
  2. Dissertations / Theses
  3. Books
  4. Book chapters
  5. Conference papers
  6. Reports

Academic literature on the topic 'Sire genetics'

Author: Grafiati
Published: 2 June 2025
Last updated: 31 July 2025

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Journal articles on the topic "Sire genetics"

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Wall, E., M. P. Coffey, S. Brotherstone, J. A. Woolliams, and A. P. F. Flint. "Developing a UK Dairy Fertility Index." Proceedings of the British Society of Animal Science 2003 (2003): 47. http://dx.doi.org/10.1017/s1752756200012060.

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National dairy records have shown that correlations between production and fertility are generally unfavourable. There has therefore been a genetic downward trend for fertility due to the increase selection pressure on yield and as a genetic problem it requires a genetic solution. The effect of sire genetics on daughter fertility is included in many genetic indices around the world. As part of a DEFRA LINK project to produce an UK fertility index this study estimates genetic parameters and sire predicted transmitting ability (PTAs) for fertility traits in the UK.
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Vostrý, L., O. Kracíková, B. Hofmanová, V. Czerneková, T. Kott, and J. Přibyl. "Intra-line and inter-line genetic diversity in sire lines of the Old Kladruber horse based on microsatellite analysis of DNA." Czech Journal of Animal Science 56, No. 4 (2011): 163–75. http://dx.doi.org/10.17221/1437-cjas.

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The Old Kladruber horse is the oldest original Czech horse breed – gene resource, with pedigree records spanning three centuries. Because the population is closed, there is a concern about the loss of genetic variation. The genetic diversity within and amongst sire lines was evaluated using microsatellite markers and based on pedigree information. The DNA analysis, covering 16 microsatellite loci, revealed that the genetic diversity (observed heterozygosity = 0.637, genetic diversity = 0.678 and the mean number of alleles = 8.25) for the Old Kladruber horse is consistent with other p
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Rebbeck, Timothy R., Chanita Hughes Halbert, and Pamela Sankar. "Genetics, Epidemiology, and Cancer Disparities: Is it Black and White?" Journal of Clinical Oncology 24, no. 14 (2006): 2164–69. http://dx.doi.org/10.1200/jco.2005.05.1656.

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Epidemiologic studies attempt to understand the distribution and determinants of human disease. Epidemiologic research often incorporates information about race, ethnicity, or ancestry, usually as a self-identified race or ethnicity (SIRE) variable. Differences in the distribution and determinants of disease on the basis of SIRE may be identified in these studies. In addition, genetic and other biologic differences according to SIRE are frequently reported. If these differences are real and meaningful, they may have value in identifying disease-causative or -preventive factors, and thus may be
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de Villena, Fernando Pardo-Manuel, Elena de la Casa-Esperón, Jean W. Williams, Jan-Michel Malette, Michelle Rosa, and Carmen Sapienza. "Heritability of the Maternal Meiotic Drive System Linked toOmand High-Resolution Mapping of theResponderLocus in Mouse." Genetics 155, no. 1 (2000): 283–89. http://dx.doi.org/10.1093/genetics/155.1.283.

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AbstractABSTRACT Matings between (C57BL/6 × DDK)F1 females and C57BL/6 males result in a significant excess of offspring inheriting maternal DDK alleles in the central region of mouse chromosome 11 due to meiotic drive at the second meiotic division. We have shown previously that the locus subject to selection is in the vicinity of D11Mit66, a marker closely linked to the Om locus that controls the preimplantation embryolethal phenotype known as the “DDK syndrome.” We have also shown that observation of meiotic drive in this system depends upon the genotype of the sire. Here we show that femal
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Mosig, Mathias O., Ehud Lipkin, Galina Khutoreskaya, Elena Tchourzyna, Morris Soller, and Adam Friedmann. "A Whole Genome Scan for Quantitative Trait Loci Affecting Milk Protein Percentage in Israeli-Holstein Cattle, by Means of Selective Milk DNA Pooling in a Daughter Design, Using an Adjusted False Discovery Rate Criterion." Genetics 157, no. 4 (2001): 1683–98. http://dx.doi.org/10.1093/genetics/157.4.1683.

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Abstract Selective DNA pooling was employed in a daughter design to screen all bovine autosomes for quantitative trait loci (QTL) affecting estimated breeding value for milk protein percentage (EBVP%). Milk pools prepared from high and low daughters of each of seven sires were genotyped for 138 dinucleotide microsatellites. Shadow-corrected estimates of sire allele frequencies were compared between high and low pools. An adjusted false discovery rate (FDR) method was employed to calculate experimentwise significance levels and empirical power. Significant associations with milk protein percent
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McGREGOR, B. A., and K. L. BUTLER. "Variation of mohair staple length across Angora goat fleeces: implications for animal selection and fleece evaluation." Journal of Agricultural Science 147, no. 4 (2009): 493–501. http://dx.doi.org/10.1017/s0021859609008703.

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SUMMARYThe present study aimed to determine how the average mohair staple length (SL) differences between nine sampling sites vary between sex and flock, to identify differences in SL variability between sampling sites as a result of between-animal and between-sire variability and to determine SL correlations between sampling sites in between-animal and between-sire variability. Australian Angora goats (n=301) from two farms in southern Australia were sampled at 12 and 18 months of age at nine sites (mid side, belly, brisket, hind flank, hip, hock, mid back, neck and shoulder). Staples were ta
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Li, L., P. M. Gurman, A. A. Swan, and D. J. Brown. "Single-step genomic evaluation of lambing ease in Australian terminal sire breed sheep." Animal Production Science 61, no. 18 (2021): 1990. http://dx.doi.org/10.1071/an21257.

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Context Australian sheep breeding values (ASBVs) for the categorical trait of lambing ease are routinely estimated by Sheep Genetics via a threshold model. This has been pedigree-only, and has not utilised genomic information. Aim The present study aimed to update the genetic evaluation model and parameters for lambing ease for terminal sire sheep (dominated by White Suffolk and Poll Dorset breeds). The model includes correlations with birthweight and gestation length. Cross-validation was used to determine the value of the improved models and the inclusion of genomic information. Methods New
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Beaudry, T. F., B. G. Cassell, M. L. McGilliard, and G. Kroll. "Impact of Trait Maximized on Sire Averages from Computerized Sire Selection." Journal of Dairy Science 69, no. 6 (1986): 1686–92. http://dx.doi.org/10.3168/jds.s0022-0302(86)80587-2.

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Ron, Micha, David Kliger, Esther Feldmesser, Eyal Seroussi, Ephraim Ezra, and Joel Ira Weller. "Multiple Quantitative Trait Locus Analysis of Bovine Chromosome 6 in the Israeli Holstein Population by a Daughter Design." Genetics 159, no. 2 (2001): 727–35. http://dx.doi.org/10.1093/genetics/159.2.727.

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Abstract Nine Israeli Holstein sire families with 2978 daughters were analyzed for quantitative trait loci effects on chromosome 6 for five milk production traits by a daughter design. All animals were genotyped for 2 markers. The three families with significant effects were genotyped for up to 10 additional markers spanning positions 0–122 cM of BTA6. Two sires were segregating for a locus affecting protein and fat percentage near position 55 cM with an estimated substitution effect of 0.18% protein, which is equivalent to one phenotypic standard deviation. This locus was localized to a confi
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Earnhardt, Audrey L., Don A. Neuendorff, Charles R. Long, Thomas H. Welsh, and Ron D. Randel. "26 Evaluation of sire versus dam effect on age at first calving in Brahman heifers." Journal of Animal Science 98, Supplement_4 (2020): 23. http://dx.doi.org/10.1093/jas/skaa278.042.

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Abstract This study evaluated the possible effects of sire and dam on age at first calving in Brahman heifers. A total of 570 heifers born between the years 2001 and 2017 were exposed as yearlings to fertile bulls through time of pregnancy determination. A calving code was determined by calculating the mean (993 d) and standard deviation (187 d) of heifer age at first calving. Heifers considered to calve early (≤899 d; calving code = 1) or late (≥1087 d; calving code = 3) were at least half a standard deviation (94 d) away from the mean. All other heifers were considered to have a normal age a
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Dissertations / Theses on the topic "Sire genetics"

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Zishiri, Oliver Tendayi. "Genetic analyses of South African terminal sire sheep breeds." Thesis, Stellenbosch : University of Stellenbosch, 2009. http://hdl.handle.net/10019.1/4034.

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Thesis (MScAgric (Animal Sciences))--University of Stellenbosch, 2009.<br>ENGLISH ABSTRACT: Fluctuations and a general decline in the ratio between wool and meat prices resulted in marked changes in the South African sheep industry. Commercial producers now exploit other mechanisms such as terminal crossbreeding of Merino-type with meat type breeds or dual-purpose breeds to attain short-term benefits resulting from price fluctuations between wool and mutton without compromising the wool-producing capacities of ewe flocks. Most components of lamb production have low heritability. However, h
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Meinert, Todd Richard. "Factors affecting the accuracy and stability of sire proofs from progeny test herds." Diss., Virginia Tech, 1991. http://hdl.handle.net/10919/39701.

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Change in Modified Contemporary Comparison proofs during first and second crop period was computed from up to eight proofs during both periods for AI and non-AI sampled Holstein bulls with repeatability of last evaluation≥.90. Effect of proof number within testing period on the bull's milk or fat evaluation was estimated with bull absorbed. AI and non-AI sampled bulls' proofs increased from initial first crop proof and then remained fairly constant during the remainder of first crop period. With inclusion of second crop daughters, proofs dropped significantly more for non-AI than AI sampled bu
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Marquez, Betz Gabriela Carolina. "Index selection in terminal sire sheep: implications for genetic improvement in a crossbreeding system." Diss., Virginia Tech, 2013. http://hdl.handle.net/10919/24774.

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Using terminal sires for crossbreeding is standard practice in the UK sheep industry, where over 70% of market lambs have terminal sire breeding. Thus, selection focusing on terminal sires will translate to changes in the entire industry. Consumers perceive lamb meat as fatty and demand for it has decreased. A lean growth index was developed for terminal sire breeds to increase carcass lean content while keeping fat constant at a constant age end point. The purposes of this study were: to evaluate the effects of index selection of terminal sires on their crossbred offspring up to harvest; to e
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Asher, Allison Marie. "CONSERVATION GENETICS OF PADDLEFISH: GENETIC EFFECTIVE POPULATION SIZE AND RANGEWIDE GENETIC STRUCTURE." OpenSIUC, 2019. https://opensiuc.lib.siu.edu/dissertations/1693.

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Paddlefish (Polyodon spathula) is a commercially and recreationally important species, with a native range that extends over 22 US states. This is a large, long-lived, highly mobile riverine species that has been negatively impacted by habitat fragmentation, historic overharvest, and hatchery supplementation. Dams are the primary cause of habitat fragmentation, blocking migration routes, flooding spawning grounds, and isolating populations. A common management action to mitigate the impacts of habitat fragmentation and maintain harvestable populations is hatchery propagation and stocking. Redu
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Williamson, Phillip C. "A Novel Mechanism for Site-Directed Mutagenesis of Large Catabolic Plasmids Using Natural Transformation." Thesis, University of North Texas, 2001. https://digital.library.unt.edu/ark:/67531/metadc2828/.

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Natural transformation is the process by which cells take up DNA from the surrounding medium under physiological conditions, altering the genotype in a heritable fashion. This occurs without chemical or physical treatment of the cells. Certain Acinetobacter strains exhibit a strong tendency to incorporate homologous DNA into their chromosomes by natural transformation. Transformation in Acinetobacter exhibits several unique properties that indicate this system's superiority as a model for transformation studies or studies which benefit from the use of transformation as an experimental method
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Jonnalagadda, Madhuri. "Site Directed Mutagensis of Bacteriophage HK639 and Identification of Its Integration Site." TopSCHOLAR®, 2008. http://digitalcommons.wku.edu/theses/42.

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Bacteriophages affect bacterial evolution, pathogenesis and global nutrient cycling. They are also the most numerous and diverse group of biological entities on the planet [1, 2, 3, 4, 5, 6]. Members of the Lambda phage family share a similar genetic organization and control early gene expression by suppressing transcription, a process known as antitermination. Transcription antitermination in Lambda is mediated by a phage-encoded protein whereas in lambdoid phage HK022, antitermination is mediated by a phage-encoded RNA molecules. Recent results suggest that another bacteriophage called H
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Gattepaille, Lucie. "Population Genetic Methods and Applications to Human Genomes." Doctoral thesis, Uppsala universitet, Evolutionsbiologi, 2015. http://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-260998.

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Population Genetics has led to countless numbers of fruitful studies of evolution, due to its abilities for prediction and description of the most important evolutionary processes such as mutation, genetic drift and selection. The field is still growing today, with new methods and models being developed to answer questions of evolutionary relevance and to lift the veil on the past of all life forms. In this thesis, I present a modest contribution to the growth of population genetics. I investigate different questions related to the dynamics of populations, with particular focus on studying hum
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Eriksson, Jesper. "Structure-Function Studies of Bacteriophage P2 Integrase and Cox protein." Doctoral thesis, Stockholm University, Department of Genetics, Microbiology and Toxicology, 2005. http://urn.kb.se/resolve?urn=urn:nbn:se:su:diva-683.

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<p>Probably no group of organisms has been as important as bacteriophages when it comes to the understanding of fundamental biological processes like transcriptional control, DNA replication, site-specific recombination, e.t.c.</p><p>The work presented in this thesis is a contribution towards the complete understanding of these organisms. Two proteins, integrase, and Cox, which are important for the choice of the life mode of bacteriophage P2, are investigated. P2 is a temperate phage, i.e. it can either insert its DNA into the host chromosome (by site-specific recombination) and wait (lysogen
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Choo, Yen. "Design of site-specific DNA-binding proteins." Thesis, University of Cambridge, 1995. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.363127.

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Sundström, Hannah. "Mutation and Diversity in Avian Sex Chromosomes." Doctoral thesis, Uppsala University, Department of Evolutionary Biology, 2003. http://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-3732.

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<p>Sex chromosomes are useful for the study of how factors such as mutation, selection, recombination and effective population size affect diversity and divergence.</p><p>A comparison of gametologous introns in seven different bird species revealed a complete lack of diversity on the female-specific W chromosome. In contrast, Z had at least one segregating site in all examined species. This can be explained by the lower mutation rate and lower effective population size of W but also suggests that selection affects diversity levels on the non-recombining W chromosome.</p><p>In a diverse set of
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Books on the topic "Sire genetics"

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Frederick, Carson Alistair, Dawson Lynne Evelyn Rosemary, Gordon Frederick James, Northern Ireland Agricultural Research and Development Council., and Northern Ireland. Department of Agriculture and Rural Development., eds. The Influence of suckler cow genetics and terminal sire on performance of the suckler herd. AgriSearch, 2004.

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Afrooz, Afghani, ed. Family history of osteoporosis. Nova Science Publishers, 2009.

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Jipa, Dan. Analiza granulometrică a sedimentelor: Semnificații genetice. Editura Academiei Republicii Socialiste România, 1987.

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International Congress on Pharmacogenetics and Anaesthetics (1986 San Remo, Italy). Pharmacogenetics and anaesthetics: Proceedings of the International Congress held in Sanremo, Italy, November 7-8th, 1986. Edited by Cominetti Marco, De Bellis Pasquale, and Rasore Quartino Alberto. Silver Press, 1988.

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Beaton, Alan. Left side, right side: A review of laterality research. Yale University Press, 1986.

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Beaton, Alan. Left side, right side: A review of laterality research. Batsford Academic and Educational, 1985.

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Smoller, Jordan W. The other side of normal: How biology is providing the clues to unlock the secrets of normal and abnormal behavior. HarperLuxe, 2012.

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International Symposium on Site-Directed Mutagenesis and Protein Engineering (1990 Tromsø, Norway). Site-directed mutagenesis and protein engineering: Proceedings of the International Symposium on Site-Directed Mutagensis and Protein Engineering, Tromsø, 27-30 August 1990. Edited by el-Gewely M. Rafaat. Elsevier Science Publishers., 1991.

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International Symposium on Site-Directed Mutagenesis and Protein Engineering (1990 Tromsø, Norway). Site-directed mutagenesis and protein engineering: Proceedings of the International Symposium on Site-Directed Mutagenesis and Protein Engineering, Tromsø, 27-30 August 1990. Edited by El-Gewely M. Rafaat. Elsevier Science Publishers, 1991.

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Maria, Pacifici Gian, and Pelkonen R. O, eds. Interindividual varaiblity in human drug metabolism. Taylor & Francis, 2001.

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Book chapters on the topic "Sire genetics"

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Cantini, Fabrizio, and Carlotta Nannini. "Epidemiology and Genetics." In Large and Medium Size Vessel and Single Organ Vasculitis. Springer International Publishing, 2021. http://dx.doi.org/10.1007/978-3-030-67175-4_2.

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Simonton, Dean Keith. "The Genetic Side of Giftedness." In From Giftedness to Gifted Education Reflecting Theory in Practice. Routledge, 2021. http://dx.doi.org/10.4324/9781003235262-16.

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Fernando, R. L., and D. Gianola. "Optimal Designs for Sire Evaluation Schemes." In Advances in Statistical Methods for Genetic Improvement of Livestock. Springer Berlin Heidelberg, 1990. http://dx.doi.org/10.1007/978-3-642-74487-7_7.

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Piles, Miriam, Maria Antonia Santacreu, Agustin Blasco, and Jun Pablo Sanchez. "Genetics of reproduction in the rabbit." In The genetics and genomics of the rabbit. CABI, 2021. http://dx.doi.org/10.1079/9781780643342.0012.

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Abstract This chapter describes the genetic determinism of all traits involved in male and female reproductive performances in rabbits. All traits related to the underlying biological processes leading to the mating outcome, as well as some of its general features, such as the homogeneity of the reproductive performances, are considered (semen and ejaculate characteristics, ovulation rate, fertility, embryo survival, fetal survival and litter size). Different parameters of fertility and litter size are discussed, including the contribution of both sexes to each phase of the reproductive cycle.
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Lande, Russell. "Genetic and Evolutionary Aspects of Allometry." In Size and Scaling in Primate Biology. Springer US, 1985. http://dx.doi.org/10.1007/978-1-4899-3647-9_2.

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Lang, Kathrin, Lloyd Davis, and Jason W. Chin. "Genetic Encoding of Unnatural Amino Acids for Labeling Proteins." In Site-Specific Protein Labeling. Springer New York, 2014. http://dx.doi.org/10.1007/978-1-4939-2272-7_15.

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van der Nest, Magriet A., Brenda D. Wingfield, Michael J. Wingfield, Jan Stenlid, Rimvydas Vasaitis, and Bernard Slippers. "Genetics of Amylostereum Species Associated with Siricidae Woodwasps." In The Sirex Woodwasp and its Fungal Symbiont:. Springer Netherlands, 2011. http://dx.doi.org/10.1007/978-94-007-1960-6_6.

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Van Strien, Jan W. "Genetic, Intrauterine, and Cultural Origins of Human Handedness." In Side Bias: A Neuropsychological Perspective. Springer Netherlands, 2000. http://dx.doi.org/10.1007/0-306-46884-0_2.

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Kermani, Tanaz A., and Kenneth J. Warrington. "Classification Criteria, Epidemiology and Genetics; and Pathogenesis." In Large and Medium Size Vessel and Single Organ Vasculitis. Springer International Publishing, 2021. http://dx.doi.org/10.1007/978-3-030-67175-4_8.

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Ohno, Susumu, Nozomu Mori, and Takeshi Matsunaga. "Conditio Sine Qua Non for de Novo Emergence of New Genes and the Concept of Primordial Building Blocks." In Genetics, Development, and Evolution. Springer US, 1986. http://dx.doi.org/10.1007/978-1-4684-5137-5_7.

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Conference papers on the topic "Sire genetics"

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Zhang, Rui, Haosen Qin, and Ziyang Wu. "Mobile Communication Network Site Planning Based on Improved Genetic Algorithm." In 2024 IEEE 6th International Conference on Power, Intelligent Computing and Systems (ICPICS). IEEE, 2024. https://doi.org/10.1109/icpics62053.2024.10796385.

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Carthy, T. R., O. M. Keane, J. P. Hanrahan, et al. "681. Investigation of intestinal atresia in a Jersey sire family." In World Congress on Genetics Applied to Livestock Production. Wageningen Academic Publishers, 2022. http://dx.doi.org/10.3920/978-90-8686-940-4_681.

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"321. Variance component estimation for single-step genomic BLUP for Australian terminal sire sheep." In World Congress on Genetics Applied to Livestock Production. Wageningen Academic Publishers, 2022. http://dx.doi.org/10.3920/978-90-8686-940-4_321.

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Pooley, C. M., G. Marion, and A. Doeschl-Wilson. "352. SIRE 2.0: a novel software tool to estimate host genetic variation in infectious disease transmission." In World Congress on Genetics Applied to Livestock Production. Wageningen Academic Publishers, 2022. http://dx.doi.org/10.3920/978-90-8686-940-4_352.

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O’Connor, E., F. M. McGovern, E. Dunne, S. J. Morrison, T. M. Boland, and N. McHugh. "704. The impact of sire on variation in methane production and dry matter intake in sheep." In World Congress on Genetics Applied to Livestock Production. Wageningen Academic Publishers, 2022. http://dx.doi.org/10.3920/978-90-8686-940-4_704.

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Turner, Charles H. "How Microimaging Technology Is Transforming the Field of Skeletal Genetics." In ASME 2002 International Mechanical Engineering Congress and Exposition. ASMEDC, 2002. http://dx.doi.org/10.1115/imece2002-33057.

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Microcomputed tomography (microCT) is emerging as the technique of choice for skeletal genetics research. The goal of these studies is to identify genes that modulate bone strength and skeletal biomechanics. Many studies use animal models, namely rats and mice. To fully characterize the skeletal phenotype, one must determine the size, shape, and microstructure of the bones preferably in three dimensions. In what follows are three examples of how μCT has been used to illuminate genetic effects on bone structure.
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"Site-specific genetic engineering in cereals – principles and applications." In Plant Genetics, Genomics, Bioinformatics, and Biotechnology. Novosibirsk ICG SB RAS 2021, 2021. http://dx.doi.org/10.18699/plantgen2021-117.

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Vafaee, Fatemeh, Gyorgy Turan, Peter C. Nelson, and Tanya Y. Berger-Wolf. "Among-site rate variation." In GECCO '14: Genetic and Evolutionary Computation Conference. ACM, 2014. http://dx.doi.org/10.1145/2576768.2598216.

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Abdullah, Alyasa Gan, and Yap Bee Wah. "Genetic code for sine." In THE 2ND ISM INTERNATIONAL STATISTICAL CONFERENCE 2014 (ISM-II): Empowering the Applications of Statistical and Mathematical Sciences. AIP Publishing LLC, 2015. http://dx.doi.org/10.1063/1.4907519.

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"T-DNA site identification by Cas9-targeted and whole-genome Nanopore sequencing of Arabidopsis thaliana." In Plant Genetics, Genomics, Bioinformatics, and Biotechnology. Novosibirsk ICG SB RAS 2021, 2021. http://dx.doi.org/10.18699/plantgen2021-077.

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Reports on the topic "Sire genetics"

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Zhang, Hongbin B., David J. Bonfil, and Shahal Abbo. Genomics Tools for Legume Agronomic Gene Mapping and Cloning, and Genome Analysis: Chickpea as a Model. United States Department of Agriculture, 2003. http://dx.doi.org/10.32747/2003.7586464.bard.

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The goals of this project were to develop essential genomic tools for modern chickpea genetics and genomics research, map the genes and quantitative traits of importance to chickpea production and generate DNA markers that are well-suited for enhanced chickpea germplasm analysis and breeding. To achieve these research goals, we proposed the following research objectives in this period of the project: 1) Develop an ordered BAC library with an average insert size of 150 - 200 kb (USA); 2) Develop 300 simple sequence repeat (SSR) markers with an aid of the BAC library (USA); 3) Develop SSR marker
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Landqvist, Sara. Nordic Conference on Genetic Resources: Possibilities and Urgency: – Report from conference arranged by NordGen in Hyllie, Malmö. Nordic Genetic Resource Center (NordGen), 2025. https://doi.org/10.53780/kmsk4343.

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December 11, 2024, NordGen arranged a conference titled ‘Nordic Conference on Genetic Resources: Possibilities and Urgency’ in Malmö, Sweden. The conference was also streamed worldwide. This report contains summaries of the conference findings and recommendations. The conference was opened by the Swedish Minister of Rural Affairs, Peter Kullgren, and the Secretary General of the Nordic Council of Ministers, Karen Ellemann and featured 12 speakers from a wide range of areas connected to different fields of genetic resources. About 140 participants attended the conference on-site in Malmö and al
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Sherman, Amir, Rebecca Grumet, Ron Ophir, Nurit Katzir, and Yiqun Weng. Whole genome approach for genetic analysis in cucumber: Fruit size as a test case. United States Department of Agriculture, 2013. http://dx.doi.org/10.32747/2013.7594399.bard.

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The Cucurbitaceae family includes a broad array of economically and nutritionally important crop species that are consumed as vegetables, staple starches and desserts. Fruit of these species, and types within species, exhibit extensive diversity as evidenced by variation in size, shape, color, flavor, and others. Fruit size and shape are critical quality determinants that delineate uses and market classes and are key traits under selection in breeding programs. However, the underlying genetic bases for variation in fruit size remain to be determined. A few species the Cucurbitaceae family were
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Zhang, Hongbin, Shahal Abbo, Weidong Chen, Amir Sherman, Dani Shtienberg, and Frederick Muehlbauer. Integrative Physical and Genetic Mapping of the Chickpea Genome for Fine Mapping and Analysis of Agronomic Traits. United States Department of Agriculture, 2010. http://dx.doi.org/10.32747/2010.7592122.bard.

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Chickpea is the third most important pulse crop in the world and ranks first in the Middle East; however, it has been subjected to only limited research in modern genomics. In the first period of this project (US-3034-98R) we constructed two large-insert BAC and BIBAC libraries, developed 325 SSR markers and mapped QTLs controlling ascochyta blight resistance (ABR) and days to first flower (DTF). Nevertheless, the utilities of these tools and results in gene discovery and marker-assisted breeding are limited due to the absence of an essential platform. The goals of this period of the project w
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Maki, Ryan, Kristen Patterson, Joseph Amundson, et al. Little Shoepack Lake muskellunge (Esox masquinongy) population estimate and genetic evaluation of muskellunge from Shoepack and Little Shoepack lakes. National Park Service, 2024. http://dx.doi.org/10.36967/2305092.

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Little Shoepack and Shoepack lakes in Voyageurs National Park, Minnesota, are home to native populations of Muskellunge (Esox masquinongy). Due to the small size of these lakes, 20.8 ha and 123 ha, respectively, and the associated, predicted small size of these Muskellunge populations, resource managers are concerned about their persistence. A recent population assessment completed for Shoepack Lake Muskellunge indicated that the population may be below a threshold at which a genetic bottleneck could threaten its persistence. Since Little Shoepack Lake is approximately 20% of the size of Shoep
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Viskochil, David H., David Stevenson, and John Carey. The University of Utah Clinical Genetics Research Program as an NF1 Consortium Site. Defense Technical Information Center, 2007. http://dx.doi.org/10.21236/ada465227.

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Wisniewski, Michael, Samir Droby, John Norelli, Dov Prusky, and Vera Hershkovitz. Genetic and transcriptomic analysis of postharvest decay resistance in Malus sieversii and the identification of pathogenicity effectors in Penicillium expansum. United States Department of Agriculture, 2012. http://dx.doi.org/10.32747/2012.7597928.bard.

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Use of Lqh2 mutants (produced at TAU) and rNav1.2a mutants (produced at the US side) for identifying receptor site-3: Based on the fact that binding of scorpion alpha-toxins is voltage-dependent, which suggests toxin binding at the mobile voltage-sensing region, we analyzed which of the toxin bioactive domains (Core-domain or NC-domain) interacts with the DIV Gating-module of rNav1.2a. This analysis was based on the assumption that the dissociation of toxin mutants upon depolarization would vary from that of the unmodified toxin should the substitutions affect a site of interaction with the ch
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Buchanan, M. V. Monitoring Genetic and Metabolic Potential for In-Site Bioremediation: Mass Spectrometry. Office of Scientific and Technical Information (OSTI), 2000. http://dx.doi.org/10.2172/885583.

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Norelli, John L., Moshe Flaishman, Herb Aldwinckle, and David Gidoni. Regulated expression of site-specific DNA recombination for precision genetic engineering of apple. United States Department of Agriculture, 2005. http://dx.doi.org/10.32747/2005.7587214.bard.

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Objectives: The original objectives of this project were to: 1) evaluate inducible promoters for the expression of recombinase in apple (USDA-ARS); 2) develop alternative selectable markers for use in apple to facilitate the positive selection of gene excision by recombinase (Cornell University); 3) compare the activity of three different recombinase systems (Cre/lox, FLP/FRT, and R/RS)in apple using a rapid transient assay (ARO); and 4) evaluate the use of recombinase systems in apple using the best promoters, selectable markers and recombinase systems identified in 1, 2 and 3 above (Collabor
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Gutnick, David, and David L. Coplin. Role of Exopolysaccharides in the Survival and Pathogenesis of the Fire Blight Bacterium, Erwinia amylovora. United States Department of Agriculture, 1994. http://dx.doi.org/10.32747/1994.7568788.bard.

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Fireblight, a disease of apples and pears, is caused by Erwinia amylovora. Mutants of E. amylovora that do not produce the extreacellular polysaccharide (EPS), amylovoran, are avirulent. A similar EPS, stewartan, is produced by E. stewartii, which caused Stewart's wilt of corn, and which has also been implicated in the virulence of this strain. Both stewartan and amylovoran are type 1 capsular polysaccharides, typified by the colanic acid slime produced by Escherichia coli. Extracellular polysaccharide slime and capsules are important for the virulence of bacterial pathogens of plants and anim
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