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Journal articles on the topic 'Spirosomes'

Author: Grafiati

Published: 7 July 2024

Last updated: 31 July 2025

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1

Azmi, Liyana, Eilis C. Bragginton, Ian T. Cadby, et al. "High-resolution structure of the alcohol dehydrogenase domain of the bifunctional bacterial enzyme AdhE." Acta Crystallographica Section F Structural Biology Communications 76, no. 9 (2020): 414–21. http://dx.doi.org/10.1107/s2053230x20010237.

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The bifunctional alcohol/aldehyde dehydrogenase (AdhE) comprises both an N-terminal aldehyde dehydrogenase (AldDH) and a C-terminal alcohol dehydrogenase (ADH). In vivo, full-length AdhE oligomerizes into long oligomers known as spirosomes. However, structural analysis of AdhE is challenging owing to the heterogeneity of the spirosomes. Therefore, the domains of AdhE are best characterized separately. Here, the structure of ADH from the pathogenic Escherichia coli O157:H7 was determined to 1.65 Å resolution. The dimeric crystal structure was confirmed in solution by small-angle X-ray scatterin

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2

Cho, Saehyun, Gijeong Kim, Ji-Joon Song, and Carol Cho. "Cryo-EM structure of Vibrio cholerae aldehyde-alcohol dehydrogenase spirosomes." Biochemical and Biophysical Research Communications 536 (January 2021): 38–44. http://dx.doi.org/10.1016/j.bbrc.2020.12.040.

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3

Nomura, Shuichi, Kuniyoshi Masuda, and Tomio Kawata. "Comparative Characterization of Spirosomes Isolated fromLactobacillus brevis, Lactobacillus fermentum, andLactobacillus buchneri." Microbiology and Immunology 33, no. 1 (1989): 23–34. http://dx.doi.org/10.1111/j.1348-0421.1989.tb01494.x.

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4

Matayoshi, Seiken, and Hiroshi Oda. "Detection of Fine Spiral Structures (Spirosomes) by Weak Sonication in Some Bacterial Strains." Microbiology and Immunology 29, no. 1 (1985): 13–20. http://dx.doi.org/10.1111/j.1348-0421.1985.tb00798.x.

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5

Laurenceau, Raphaël, Petya V. Krasteva, Amy Diallo, et al. "Conserved Streptococcus pneumoniae Spirosomes Suggest a Single Type of Transformation Pilus in Competence." PLOS Pathogens 11, no. 4 (2015): e1004835. http://dx.doi.org/10.1371/journal.ppat.1004835.

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6

Matayoshi, S., H. Oda, and G. Sarwar. "Relationship between the Production of Spirosomes and Anaerobic Glycolysis Activity in Escherichia coli B." Microbiology 135, no. 3 (1989): 525–29. http://dx.doi.org/10.1099/00221287-135-3-525.

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7

Extance, Jonathan, Susan J. Crennell, Kirstin Eley, Roger Cripps, David W. Hough, and Michael J. Danson. "Structure of a bifunctional alcohol dehydrogenase involved in bioethanol generation inGeobacillus thermoglucosidasius." Acta Crystallographica Section D Biological Crystallography 69, no. 10 (2013): 2104–15. http://dx.doi.org/10.1107/s0907444913020349.

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Bifunctional alcohol/aldehyde dehydrogenase (ADHE) enzymes are found within many fermentative microorganisms. They catalyse the conversion of an acyl-coenzyme A to an alcoholviaan aldehyde intermediate; this is coupled to the oxidation of two NADH molecules to maintain the NAD+pool during fermentative metabolism. The structure of the alcohol dehydrogenase (ADH) domain of an ADHE protein from the ethanol-producing thermophileGeobacillus thermoglucosidasiushas been determined to 2.5 Å resolution. This is the first structure to be reported for such a domain.In silicomodelling has been carried out

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8

Ahn, Jae-Hyung, Hang-Yeon Weon, Soo-Jin Kim, Seung-Beom Hong, Soon-Ja Seok, and Soon-Wo Kwon. "Spirosoma oryzae sp. nov., isolated from rice soil and emended description of the genus Spirosoma." International Journal of Systematic and Evolutionary Microbiology 64, Pt_9 (2014): 3230–34. http://dx.doi.org/10.1099/ijs.0.062901-0.

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A bacterial strain, designated RHs22T, was isolated from a soil sample cultivated with rice in the Suwon region of South Korea. The cells were aerobic, Gram-stain-negative, non-spore-forming, non-flagellated rods or occasionally filaments. The strain grew at 10–37 °C (optimum, 28–30 °C), at pH 5.0–10.0 (optimum, 7.0) and in the presence of 0–1 % (w/v) NaCl (optimum, 0 %). Phylogenetically, the strain was closely related to members of the genus Spirosoma , as its 16S rRNA gene sequence had similarity of 90.3–92.1 % with respect to those of members of the genus Spirosoma , showing the highest se

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9

Fries, Julia, Stefan Pfeiffer, Melanie Kuffner, and Angela Sessitsch. "Spirosoma endophyticum sp. nov., isolated from Zn- and Cd-accumulating Salix caprea." International Journal of Systematic and Evolutionary Microbiology 63, Pt_12 (2013): 4586–90. http://dx.doi.org/10.1099/ijs.0.052654-0.

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A Gram-reaction-negative, yellow-pigmented strain, designated EX36T, was characterized using a polyphasic approach comprising phylogenetic, morphological and genotypic analyses. The endophytic strain was isolated from Zn/Cd-accumulating Salix caprea in Arnoldstein, Austria. Analysis of the 16S rRNA gene demonstrated that the novel strain is most closely related to members of the genus Spirosoma (95 % sequence similarity with Spirosoma linguale ). The genomic DNA G+C content was 47.2 mol%. The predominant quinone was and the major cellular fatty acids were summed feature 3 (iso-C15 : 0 2-OH and

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10

Hatayama, Kouta, and Teruaki Kuno. "Spirosoma fluviale sp. nov., isolated from river water." International Journal of Systematic and Evolutionary Microbiology 65, Pt_10 (2015): 3447–50. http://dx.doi.org/10.1099/ijsem.0.000433.

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A bacterial strain, designated MSd3T, was isolated from a freshwater sample collected from the Hosoda River in Japan. The cells of strain MSd3T were Gram-stain-negative, non-spore-forming, aerobic, non-motile, curved rods forming rings, coils and undulating filaments. The 16S rRNA gene sequence of strain MSd3T showed closest similarity to that of Spirosoma linguale DSM 74T (97.6 % similarity) and similarity to other members of the genus Spirosoma ranged from 90.3 to 95.9 %. Strain MSd3T contained menaquinone 7 as the sole respiratory quinone. The major cellular fatty acids were summed feature

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11

Kim, Dong-Uk, Hyosun Lee, Song-Gun Kim, Jae-Hyung Ahn, So Yoon Park, and Jong-Ok Ka. "Spirosoma aerolatum sp. nov., isolated from a motor car air conditioning system." International Journal of Systematic and Evolutionary Microbiology 65, Pt_11 (2015): 4003–7. http://dx.doi.org/10.1099/ijsem.0.000528.

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A Gram-stain-negative, yellow-pigmented bacterial strain, designated PR1012KT, was isolated from a motor car evaporator core collected in Korea. Cells of the strain were facultatively anaerobic, non-spore-forming and rod-shaped. The strain grew at 10–40 °C (optimum, 25 °C), at pH 6.5–8.0 (optimum, pH 7.0–8.0) and in the presence of 0–1 % (w/v) NaCl. Phylogenetically, the strain was closely related to members of the genus Spirosoma (97.50–90.74 % 16S rRNA gene sequence similarities) and showed highest sequence similarity to Spirosoma panaciterrae DSM 21099T (97.50 %). Its predominant fatty acid

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12

Kang, Heeyoung, Inseong Cha, Haneul Kim, and Kiseong Joh. "Spirosoma telluris sp. nov. and Spirosoma arboris sp. nov. isolated from soil and tree bark, respectively." International Journal of Systematic and Evolutionary Microbiology 70, no. 10 (2020): 5355–62. http://dx.doi.org/10.1099/ijsem.0.004418.

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Two novel strains (HMF3257T and HMF4905T), isolated from freshwater and bark samples, were investigated to determine their relationships within and between species of the genus Spirosoma by using a polyphasic approach. They were aerobic, Gram-stain-negative, non-motile and rod-shaped bacteria. The major fatty acids (>10%) in both strains were identified as summed feature 3 (C16 : 1 ω7c and/or C16 : 1 ω6c) and C16 : 1 ω5c, while strains HMF3257T and HMF4905T contained a moderately high amount of C16 : 0 and iso-C15 : 0, respectively. The predominant respiratory quinone was MK-7 for both stra

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13

Baik, Keun Sik, Mi Sun Kim, Seong Chan Park, et al. "Spirosoma rigui sp. nov., isolated from fresh water." International Journal of Systematic and Evolutionary Microbiology 57, no. 12 (2007): 2870–73. http://dx.doi.org/10.1099/ijs.0.65302-0.

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A Gram-negative, yellow-pigmented bacterium capable of gliding motility, designated strain WPCB118T, was isolated from fresh water collected from the Woopo wetland (Republic of Korea). Cells were rod-shaped and sometimes filamentous. The major fatty acids were iso-C15 : 0 2-OH and/or C16 : 1 ω7c (45.6 %), C16 : 1 ω5c (18.5 %), iso-C15 : 0 (9.5 %) and C16 : 0 (8.8 %). The predominant menaquinone and polar lipid were MK-7 and phosphatidylethanolamine, respectively. The DNA G+C content was 53.3 mol%. A phylogenetic tree based on 16S rRNA gene sequences showed that strain WPCB118T had an evolution

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14

Chang, Xulu, Fan Jiang, Tao Wang, et al. "Spirosoma arcticum sp. nov., isolated from high Arctic glacial till." International Journal of Systematic and Evolutionary Microbiology 64, Pt_7 (2014): 2233–37. http://dx.doi.org/10.1099/ijs.0.061853-0.

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A novel orange-pigmented strain, designated R2-35T, was isolated from a glacier till near Ny-Alesund, Svalbard Archipelago, Norway. The cells were aerobic, Gram-negative, rod-shaped and sometimes filamentous. Growth occurred at 4–28 °C (optimum, 20 °C), at pH 7.0–9.0 (optimum, pH 8.0) and with 0–1 % NaCl. Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain R2-35T belonged to the genus Spirosoma with sequence similarity to related species ranging from 91.65 to 95.19 %. Strain R2-35T contained C16 : 0 (10.7 %), C18 : 0 (9.2 %), C16 : 1ω5c (16.5 %) and summed feature 3 (C

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15

Finster, K. W., R. A. Herbert, and B. A. Lomstein. "Spirosoma spitsbergense sp. nov. and Spirosoma luteum sp. nov., isolated from a high Arctic permafrost soil, and emended description of the genus Spirosoma." INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY 59, no. 4 (2009): 839–44. http://dx.doi.org/10.1099/ijs.0.002725-0.

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16

MATAYOSHI, Seiken. "Studies on the locality and the function of spirosome in bacterial cells: relationship between the production of spirosome and anaerobic glycolysis." Nippon Saikingaku Zasshi 48, no. 2 (1993): 417–27. http://dx.doi.org/10.3412/jsb.48.417.

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17

Ten, L. N., J. L. Xu, F. X. Jin, W. T. Im, H. M. Oh, and S. T. Lee. "Spirosoma panaciterrae sp. nov., isolated from soil." INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY 59, no. 2 (2009): 331–35. http://dx.doi.org/10.1099/ijs.0.002436-0.

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18

Jang, Jun Hyeong, Seho Cha, Dongwook Lee, et al. "Spirosoma areae sp. nov., Isolated from Soil." Current Microbiology 74, no. 10 (2017): 1148–52. http://dx.doi.org/10.1007/s00284-017-1297-8.

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19

Li, Weilan, Leonid N. Ten, Seung-Yeol Lee, Dong Hoon Lee, and Hee-Young Jung. "Spirosoma jeollabukense sp. nov., isolated from soil." Archives of Microbiology 200, no. 3 (2017): 431–38. http://dx.doi.org/10.1007/s00203-017-1453-3.

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20

Lee, Jae-Jin, Su-Jin Park, Yeon-Hee Lee, et al. "Spirosoma luteolum sp. nov. isolated from water." Journal of Microbiology 55, no. 4 (2017): 247–52. http://dx.doi.org/10.1007/s12275-017-6455-y.

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21

Li, Weilan, Seung-Yeol Lee, Sangkyu Park, Byung-Oh Kim, Leonid N. Ten, and Hee-Young Jung. "Spirosoma lituiforme sp. nov., isolated from soil." Journal of Microbiology 55, no. 11 (2017): 856–61. http://dx.doi.org/10.1007/s12275-017-7255-0.

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22

Okiria, Joseph, Leonid N. Ten, Su-Jin Park, et al. "Spirosoma migulaei sp. nov., isolated from soil." Journal of Microbiology 55, no. 12 (2017): 927–32. http://dx.doi.org/10.1007/s12275-017-7377-4.

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23

Park, Yuna, Soohyun Maeng, Tuvshinzaya Damdintogtokh, et al. "Spirosoma profusum sp. nov., and Spirosoma validum sp. nov., radiation-resistant bacteria isolated from soil in South Korea." Antonie van Leeuwenhoek 114, no. 7 (2021): 1155–64. http://dx.doi.org/10.1007/s10482-021-01585-9.

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24

Filippini, Manuela, Miroslav Svercel, Endre Laczko, Andres Kaech, Urs Ziegler, and Homayoun C. Bagheri. "Fibrella aestuarina gen. nov., sp. nov., a filamentous bacterium of the family Cytophagaceae isolated from a tidal flat, and emended description of the genus Rudanella Weon et al. 2008." International Journal of Systematic and Evolutionary Microbiology 61, no. 1 (2011): 184–89. http://dx.doi.org/10.1099/ijs.0.020503-0.

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A Gram-staining-negative, pink bacterium, designated strain BUZ 2T, was isolated from coastal mud from the North Sea (Fedderwardersiel, Germany). Cells were rod-shaped and able to form multicellular filaments. Growth after 7 days was observed at 10–40 °C, at pH 6–8 and with 0–0.5 % NaCl. The phylogenetic tree based on 16S rRNA gene sequences indicated that strain BUZ 2T is a member of the family Cytophagaceae, its closest neighbours being Rudanella lutea 5715S-11T, Spirosoma linguale LMG 10896T and Spirosoma panaciterrae Gsoil 1519T (87.8, 86.4 and 86.1 % sequence similarity, respectively). Th

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25

Joo, Eun Sun, Eun Bit Kim, Seon Hwa Jeon, Sathiyaraj Srinivasan, and Myung Kyum Kim. "Spirosoma swuense sp. nov., isolated from wet soil." International Journal of Systematic and Evolutionary Microbiology 67, no. 3 (2017): 532–36. http://dx.doi.org/10.1099/ijsem.0.001592.

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26

Lee, Jae-Jin, Nabil Elderiny, Seung-Yeol Lee, et al. "Spirosoma gilvum sp. nov., Isolated from Beach Soil." Current Microbiology 74, no. 12 (2017): 1425–31. http://dx.doi.org/10.1007/s00284-017-1336-5.

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27

Elderiny, Nabil, Leonid N. Ten, Jae-Jin Lee, et al. "Spirosoma daeguensis sp. nov., isolated from beach soil." Journal of Microbiology 55, no. 9 (2017): 678–83. http://dx.doi.org/10.1007/s12275-017-7211-z.

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28

Park, Yuna, Soohyun Maeng, Tuvshinzaya Damdintogtokh, et al. "Correction to: Spirosoma profusum sp. nov., and Spirosoma validum sp. nov., radiation-resistant bacteria isolated from soil in South Korea." Antonie van Leeuwenhoek 114, no. 9 (2021): 1481. http://dx.doi.org/10.1007/s10482-021-01613-8.

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29

Srinivasan, Sathiyaraj, Myung-Suk Kang, and Myung Kyum Kim. "Complete genome sequence of Spirosoma montaniterrae DY10T isolated from gamma-ray irradiated soil." Korean Journal of Microbiology 53, no. 1 (2017): 61–63. http://dx.doi.org/10.7845/kjm.2017.7006.

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30

Lail, Kathleen, Johannes Sikorski, Elizabeth Saunders, et al. "Complete genome sequence of Spirosoma linguale type strain (1T)." Standards in Genomic Sciences 2, no. 2 (2010): 176–84. http://dx.doi.org/10.4056/sigs.741334.

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31

Kim, Soo-Jin, Jae-Hyung Ahn, Hang-Yeon Weon, et al. "Spirosoma aerophilum sp. nov., isolated from an air sample." International Journal of Systematic and Evolutionary Microbiology 66, no. 6 (2016): 2342–46. http://dx.doi.org/10.1099/ijsem.0.001037.

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32

Yang, Shan Shan, Kai Tang, Xiaojie Zhang, et al. "Spirosoma soli sp. nov., isolated from biological soil crusts." International Journal of Systematic and Evolutionary Microbiology 66, no. 12 (2016): 5568–74. http://dx.doi.org/10.1099/ijsem.0.001558.

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33

Zou, Rui, Yumin Zhang, Xueyin Zhou, Yang Wang, and Fang Peng. "Spirosoma flavum sp. nov., isolated from Arctic tundra soil." International Journal of Systematic and Evolutionary Microbiology 67, no. 12 (2017): 4911–16. http://dx.doi.org/10.1099/ijsem.0.002238.

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34

Li, Weilan, Leonid N. Ten, Seung-Yeol Lee, In-Kyu Kang, and Hee-Young Jung. "Spirosoma horti sp. nov., isolated from apple orchard soil." International Journal of Systematic and Evolutionary Microbiology 68, no. 3 (2018): 930–35. http://dx.doi.org/10.1099/ijsem.0.002614.

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35

Li, Weilan, Seung-Yeol Lee, In-Kyu Kang, Leonid N. Ten, and Hee-Young Jung. "Spirosoma agri sp. nov., Isolated from Apple Orchard Soil." Current Microbiology 75, no. 6 (2018): 694–700. http://dx.doi.org/10.1007/s00284-018-1434-z.

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36

Li, Weilan, Seung-Yeol Lee, In-Kyu Kang, Leonid N. Ten, and Hee-Young Jung. "Spirosoma pomorum sp. nov., isolated from apple orchard soil." Journal of Microbiology 56, no. 2 (2018): 90–96. http://dx.doi.org/10.1007/s12275-018-7430-y.

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37

Malinski, Thomas J., та Harkewal Singh. "Enzymatic Conversion of RBCs by α-N-Acetylgalactosaminidase from Spirosoma linguale". Enzyme Research 2019 (2 травня 2019): 1–27. http://dx.doi.org/10.1155/2019/6972835.

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Spirosoma linguale is a free-living nonpathogenic organism. Like many other bacteria, S. linguale produces a cell-associated α-N-acetylgalactosaminidase. This work was undertaken to elucidate the nature of this activity. The recombinant enzyme was produced, purified, and examined for biochemical attributes. The purified enzyme was ~50 kDa active as a homodimer in solution. It catalyzed hydrolysis of α-N-acetylgalactosamine at pH 7. Calculated KM was 1.1 mM with kcat of 173 s−1. The described enzyme belongs to the GH109 family.

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38

Okiria, Joseph, Leonid N. Ten, Jae-Jin Lee, et al. "Spirosoma litoris sp. nov., a bacterium isolated from beach soil." International Journal of Systematic and Evolutionary Microbiology 67, no. 12 (2017): 4986–91. http://dx.doi.org/10.1099/ijsem.0.002394.

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39

Weilan, Li, Jae-Jin Lee, Seung-Yeol Lee, Sangkyu Park, Leonid N. Ten, and Hee-Young Jung. "Spirosoma humi sp. nov., Isolated from Soil in South Korea." Current Microbiology 75, no. 3 (2017): 328–35. http://dx.doi.org/10.1007/s00284-017-1384-x.

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40

Зайчикова, М. В., Ю. Ю. Берестовская, Б. Б. Кузнецов та Л. В. Васильева. "Spirosoma xylofagasp. nov.– олиготрофная плеоморфная бактерия мико-бактериального сообщества пресноводных экосистем". Микробиология 82, № 4 (2013): 448–55. http://dx.doi.org/10.7868/s0026365613040150.

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41

Kim, Dong-Uk, Hyosun Lee, Suyeon Lee, et al. "Spirosoma carri sp. nov., isolated from an automobile air conditioning system." International Journal of Systematic and Evolutionary Microbiology 67, no. 10 (2017): 4195–99. http://dx.doi.org/10.1099/ijsem.0.002276.

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42

Kim, Dong-Uk, Hyosun Lee, Suyeon Lee, Sooyeon Park, Jung-Hoon Yoon, and Jong-Ok Ka. "Spirosoma metallilatum sp. nov., isolated from an automotive air conditioning system." International Journal of Systematic and Evolutionary Microbiology 68, no. 2 (2018): 523–28. http://dx.doi.org/10.1099/ijsem.0.002533.

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43

Ten, Leonid N., Nabil Elderiny, Jae-Jin Lee, et al. "Spirosoma harenae sp. nov., a Bacterium Isolated from a Sandy Beach." Current Microbiology 75, no. 2 (2017): 179–85. http://dx.doi.org/10.1007/s00284-017-1363-2.

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44

Ten, Leonid N., Joseph Okiria, Jae-Jin Lee, et al. "Spirosoma terrae sp. nov., Isolated from Soil from Jeju Island, Korea." Current Microbiology 75, no. 4 (2017): 492–98. http://dx.doi.org/10.1007/s00284-017-1408-6.

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45

Kim, Dong-Uk, Hyosun Lee, Suyeon Lee, et al. "Spirosoma metallum sp. nov., isolated from an automobile air conditioning system." Archives of Microbiology 200, no. 1 (2017): 91–96. http://dx.doi.org/10.1007/s00203-017-1424-8.

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46

Lee, Hyosun, Dong-Uk Kim, Suyeon Lee, et al. "Spirosoma metallicus sp. nov., isolated from an automobile air conditioning system." Journal of Microbiology 55, no. 9 (2017): 673–77. http://dx.doi.org/10.1007/s12275-017-7162-4.

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47

Yamato, Masayuki, Yuko Takahashi, Hiroyuki Tomotake, Fusao Ota, Katsuhiko Hirota, and Kazuo Yamaguchi. "Monoclonal Antibodies to Spirosin ofYersinia enterocoliticaand Analysis of the Localization of Spirosome by Use of Them." Microbiology and Immunology 38, no. 3 (1994): 177–82. http://dx.doi.org/10.1111/j.1348-0421.1994.tb01762.x.

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48

Elderiny, Nabil, Seung-Yeol Lee, Sangkyu Park, et al. "Spirosoma flavus sp. nov., a novel bacterium from soil of Jeju Island." Journal of Microbiology 55, no. 11 (2017): 850–55. http://dx.doi.org/10.1007/s12275-017-7360-0.

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49

Ambika Manirajan, Binoy, Christian Suarez, Stefan Ratering, et al. "Spirosoma pollinicola sp. nov., isolated from pollen of common hazel (Corylus avellana L.)." International Journal of Systematic and Evolutionary Microbiology 68, no. 10 (2018): 3248–54. http://dx.doi.org/10.1099/ijsem.0.002973.

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50

Li, Yong, Meng-Jie Ai, Ye Sun, Yu-Qin Zhang, and Jian-Qiang Zhang. "Spirosoma lacussanchae sp. nov., a phosphate-solubilizing bacterium isolated from a freshwater reservoir." International Journal of Systematic and Evolutionary Microbiology 67, no. 9 (2017): 3144–49. http://dx.doi.org/10.1099/ijsem.0.001778.

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