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Journal articles on the topic 'SyRS'

Author: Grafiati

Published: 4 June 2021

Last updated: 10 February 2022

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1

Lu, Shi-En, Brenda K. Scholz-Schroeder, and Dennis C. Gross. "Characterization of the salA, syrF, and syrG Regulatory Genes Located at the Right Border of the Syringomycin Gene Cluster of Pseudomonas syringae pv. syringae." Molecular Plant-Microbe Interactions® 15, no. 1 (2002): 43–53. http://dx.doi.org/10.1094/mpmi.2002.15.1.43.

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Sequence analysis of the right border of the syr gene cluster of Pseudomonas syringae pv. syringae strain B301D revealed the presence of the salA gene 8,113 bp downstream of syrE. The predicted SalA protein of strain B301D differs by one amino acid from that of strain B728a. Two homologs of salA, designated syrF and syrG, were identified between syrE and salA. All three proteins contain helix-turn-helix DNA-binding motifs at their C termini and exhibit homology to regulatory proteins of the LuxR family. A salA mutant failed to produce syringomycin, whereas syrF and syrG mutants produced 12 and

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2

Barnett, Melanie J., and Sharon R. Long. "Identification and Characterization of a Gene on Rhizobium meliloti pSyma, syrB, That Negatively Affects syrM Expression." Molecular Plant-Microbe Interactions® 10, no. 5 (1997): 550–59. http://dx.doi.org/10.1094/mpmi.1997.10.5.550.

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The Rhizobium meliloti SyrM protein activates transcription of nodD3 and syrA. Regulation of syrM is complex and may involve as yet undiscovered genes. Here we report the isolation of insertion mutants showing increased expression of a syrM-gusA gene fusion. Characterization of one mutant strain, designated SYR-B, revealed a mutation consisting of a transposon insertion linked to a large deletion. The corresponding wild-type DNA was cloned as a 5.3-kb BamHI fragment. Genetic and physical analysis of this DNA demonstrated that an open reading frame (ORF) near one end of the fragment, encoding t

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3

Ghimire, Bina, Nikita Maharjan, and Jagdish Dotel. "Drought assessment on barley and millet production in Karnali Province, Nepal." Nepal Journal of Environmental Science 8 (December 31, 2020): 53–67. http://dx.doi.org/10.3126/njes.v8i1.35729.

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Spatio-temporal characteristics of agricultural drought and its impact on the yield of winter barley and summer millet crops in Karnali Province of Nepal were evaluated. For this purpose, precipitation data from 1988 to 2018 of 18 stations and agricultural data from 2003 to 2018 were used for the analysis. Standardized Precipitation Indices (SPI-3 and SPI-4) were used for measuring drought intensity. Based on drought intensity, SPI<-1 was considered for drought occurrence. Similarly, Standardized Residual Yield Series (SYRS) was also calculated for crop yield change, eliminating other facto

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4

Wang, Nian, Shi-En Lu, Qingwu Yang, Sing-Hoi Sze, and Dennis C. Gross. "Identification of the syr-syp Box in the Promoter Regions of Genes Dedicated to Syringomycin and Syringopeptin Production by Pseudomonas syringae pv. syringae B301D." Journal of Bacteriology 188, no. 1 (2006): 160–68. http://dx.doi.org/10.1128/jb.188.1.160-168.2006.

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ABSTRACT The phytotoxins syringopeptin and syringomycin are synthesized by nonribosomal peptide synthetases which are encoded by the syringomycin (syr) and syringopeptin (syp) genomic island of Pseudomonas syringae pv. syringae. Previous studies demonstrated that expression of the syr-syp genes was controlled by the salA-syrF regulatory pathway, which in turn was induced by plant signal molecules. In this study, the 132-kb syr-syp genomic island was found to be organized into five polycistronic operons along with eight individual genes based on reverse transcriptional PCR and bioinformatic ana

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5

Scheck, Heather J., Marilyn L. Canfield, Jay W. Pscheidt, and Larry W. Moore. "Rapid Evaluation of Pathogenicity in Pseudomonas syringae pv. syringae with a Lilac Tissue Culture Bioassay and Syringomycin DNA Probes." Plant Disease 81, no. 8 (1997): 905–10. http://dx.doi.org/10.1094/pdis.1997.81.8.905.

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Losses from diseases caused by Pseudomonas syringae pv. syringae occur on a large number of deciduous woody plants in commercial nurseries in the Pacific Northwest. Bioassays for pathogenicity are one step in the identification of P. syringae pv. syringae and are usually performed on the host of isolation; however, woody plants can take months to develop symptoms. A bioassay with highly susceptible lilac (Syringa vulgaris ‘Sensation’) tissue culture plantlets evaluated pathogenicity in strains of P. syringae pv. syringae isolated from 25 species of deciduous woody plants. DNA colony hybridizat

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6

Barnett, Melanie J., and Sharon R. Long. "The Sinorhizobium meliloti SyrM Regulon: Effects on Global Gene Expression Are Mediated bysyrAandnodD3." Journal of Bacteriology 197, no. 10 (2015): 1792–806. http://dx.doi.org/10.1128/jb.02626-14.

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ABSTRACTInSinorhizobium meliloti, three NodD transcriptional regulators activate bacterial nodulation (nod) gene expression. NodD1 and NodD2 require plant compounds to activatenodgenes. The NodD3 protein does not require exogenous compounds to activatenodgene expression; instead, another transcriptional regulator, SyrM, activatesnodD3expression. In addition, NodD3 can activatesyrMexpression. SyrM also activates expression of another gene,syrA, which when overexpressed causes a dramatic increase in exopolysaccharide production. In a previous study, we identified more than 200 genes with altered

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7

Wang, Nian, Shi-En Lu, Angela R. Records, and Dennis C. Gross. "Characterization of the Transcriptional Activators SalA and SyrF, Which Are Required for Syringomycin and Syringopeptin Production by Pseudomonas syringae pv. syringae." Journal of Bacteriology 188, no. 9 (2006): 3290–98. http://dx.doi.org/10.1128/jb.188.9.3290-3298.2006.

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ABSTRACT Production of the phytotoxins syringomycin and syringopeptin by Pseudomonas syringae pv. syringae is controlled by the regulatory genes salA and syrF. Analysis with 70-mer oligonucleotide microarrays established that the syr-syp genes responsible for synthesis and secretion of syringomycin and syringopeptin belong to the SyrF regulon. Vector pMEKm12 was successfully used to express both SalA and SyrF proteins fused to a maltose-binding protein (MBP) in Escherichia coli and P. syringae pv. syringae. Both the MBP-SalA and MBP-SyrF fusion proteins were purified by maltose affinity chroma

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8

Mulligan, J. T., and S. R. Long. "A family of activator genes regulates expression of Rhizobium meliloti nodulation genes." Genetics 122, no. 1 (1989): 7–18. http://dx.doi.org/10.1093/genetics/122.1.7.

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Abstract Nodulation (nod) gene expression in Rhizobium meliloti requires plant inducers and the activating protein product of the nodD gene. We have examined three genes in R. meliloti which have nodD activity and sequence homology. These three nodD genes are designated nodD1, nodD2 and nodD3, and have distinctive properties. The nodD1 gene product activates expression of the nodABC operon, as measured by a nodC-lacZ fusion or by transcript analysis, in the presence of crude seed or plant wash or the inducer, luteolin. The nodD3 gene product can cause a high basal (uninduced) level of nodC-lac

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9

Barnett, Melanie J., Jean A. Swanson, and Sharon R. Long. "Multiple Genetic Controls on Rhizobium meliloti syrA, a Regulator of Exopolysaccharide Abundance." Genetics 148, no. 1 (1998): 19–32. http://dx.doi.org/10.1093/genetics/148.1.19.

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Abstract Exopolysaccharides (EPS) are produced by a wide assortment of bacteria including plant pathogens and rhizobial symbionts. Rhizobium meliloti mutants defective in EPS production fail to invade alfalfa nodules. Production of EPS in R. meliloti is likely controlled at several levels. We have characterized a new gene of this regulatory circuit. syrA was identified by its ability to confer mucoid colony morphology and by its ability to suppress the colonial phenotype of an exoD mutant. Here we show that syrA encodes a 9-kD hydrophobic protein that has sequence similarity to two other EPS r

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10

Sorensen, Kevin N., Kwang-Hee Kim, and Jon Y. Takemoto. "PCR Detection of Cyclic Lipodepsinonapeptide-Producing Pseudomonas syringae pv. syringae and Similarity of Strains." Applied and Environmental Microbiology 64, no. 1 (1998): 226–30. http://dx.doi.org/10.1128/aem.64.1.226-230.1998.

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ABSTRACT Many strains of Pseudomonas syringae pv. syringae produce one of four classes of small cyclic lipodepsinonapeptides: syringomycins, syringostatins, syringotoxins, or pseudomycins. These metabolites are phytotoxic and growth inhibitory against a broad spectrum of fungi. Their production is dependent upon the expression of conserved biosynthesis and export genes syrB andsyrD, respectively. PCR and oligonucleotide primers specific for a 752-bp fragment of syrB were used to identify cyclic lipodepsinonapeptide-producing strains of P. syringae pv. syringae. In contrast, PCR amplification w

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11

Wang, Nian, Shi-En Lu, Jianlin Wang, Z. Jeffrey Chen, and Dennis C. Gross. "The Expression of Genes Encoding Lipodepsipeptide Phytotoxins by Pseudomonas syringae pv. syringae Is Coordinated in Response to Plant Signal Molecules." Molecular Plant-Microbe Interactions® 19, no. 3 (2006): 257–69. http://dx.doi.org/10.1094/mpmi-19-0257.

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Specific plant signal molecules are known to induce syringomycin production and expression of syrB1, a syringomycin synthetase gene, in Pseudomonas syringae pv. syringae. This report demonstrates that syringopeptin production likewise is activated by plant signal molecules and that the GacS, SalA, and SyrF regulatory pathway mediates transmission of plant signal molecules to the syr-syp biosynthesis apparatus. Syringopeptin production by BR132 was increased twofold by addition of arbutin (100 μM) and D-fructose (0.1%) to syringomycin minimal medium (SRM). Among 10 plant phenolic compounds test

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12

Stock, Stephen D., Hiroko Hama, Jeffrey A. Radding, Debra A. Young, and Jon Y. Takemoto. "Syringomycin E Inhibition of Saccharomyces cerevisiae: Requirement for Biosynthesis of Sphingolipids with Very-Long-Chain Fatty Acids and Mannose- and Phosphoinositol-Containing Head Groups." Antimicrobial Agents and Chemotherapy 44, no. 5 (2000): 1174–80. http://dx.doi.org/10.1128/aac.44.5.1174-1180.2000.

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ABSTRACT Syringomycin E is an antifungal cyclic lipodepsinonapeptide that inhibits the growth of Saccharomyces cerevisiae by interaction with the plasma membrane. A screen conducted to find the yeast genes necessary for its fungicidal action identified two novel syringomycin E response genes, SYR3 and SYR4. Asyr3 mutant allele was complemented by ELO2 andELO3. These genes encode enzymes that catalyze the elongation of sphingolipid very long chain fatty acids. Tetrad analysis showed that SYR3 was ELO2. Strains with deletions of SYR3/ELO2 and ELO3 were resistant to syringomycin E, and lipid anal

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13

Molisso, Donata, Mariangela Coppola, Anna Maria Aprile, et al. "Colonization of Solanum melongena and Vitis vinifera Plants by Botrytis cinerea Is Strongly Reduced by the Exogenous Application of Tomato Systemin." Journal of Fungi 7, no. 1 (2020): 15. http://dx.doi.org/10.3390/jof7010015.

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Plant defense peptides are able to control immune barriers and represent a potential novel resource for crop protection. One of the best-characterized plant peptides is tomato Systemin (Sys) an octadecapeptide synthesized as part of a larger precursor protein. Upon pest attack, Sys interacts with a leucine-rich repeat receptor kinase, systemin receptor SYR, activating a complex intracellular signaling pathway that leads to the wound response. Here, we demonstrated, for the first time, that the direct delivery of the peptide to Solanum melongena and Vitis vinifera plants protects from the agent

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14

Gage, Daniel J., та Sharon R. Long. "α-Galactoside Uptake in Rhizobium meliloti: Isolation and Characterization of agpA, a Gene Encoding a Periplasmic Binding Protein Required for Melibiose and Raffinose Utilization". Journal of Bacteriology 180, № 21 (1998): 5739–48. http://dx.doi.org/10.1128/jb.180.21.5739-5748.1998.

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ABSTRACT Rhizobium meliloti can occupy at least two distinct ecological niches; it is found in the soil as a free-living saprophyte, and it also lives as a nitrogen-fixing intracellular symbiont in root nodules of alfalfa and related legumes. One approach to understanding how R. meliloti alters its physiology in order to become an integral part of a developing nodule is to identify and characterize genes that are differentially expressed by bacteria living inside nodules. We used a screen to identify genes under the control of theR. meliloti regulatory protein NodD3, SyrM, or SyrA. These regul

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15

Roy, A. L., J. S. Ulvestad, E. J. M. Colbert, A. S. Wilson, and R. P. Norris. "Survey of Milliarcsec Structure in Eight Seyfert Galaxies: Results on NGC 1068 and NGC 4151." International Astronomical Union Colloquium 164 (1998): 301–2. http://dx.doi.org/10.1017/s0252921100045668.

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AbstractWe are surveying eight nearby Seyfert galaxies (four Sy1s and four Sy2s) that have compact radio cores, using the VLBA. We are interested in parsec-scale morphology and low-frequency absorption effects, and so are observing four frequencies (1.6, 4.8, 8.4 and 15 GHz) to get spectral-index diagnostics. In this paper, we present results on two galaxies, NGC 1068 and NGC 4151. NGC 4151 shows a curved radio jet on the sub-parsec scale, with the smallest scale structure misaligned by 55° from the jet on scales of parsecs to hundreds of parsecs. NGC 1068 contains several components in the in

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16

Xu, G. W., and D. C. Gross. "Physical and functional analyses of the syrA and syrB genes involved in syringomycin production by Pseudomonas syringae pv. syringae." Journal of Bacteriology 170, no. 12 (1988): 5680–88. http://dx.doi.org/10.1128/jb.170.12.5680-5688.1988.

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17

Vaughn, Vanessa L., and Dennis C. Gross. "Characterization of salA, syrF, and syrG Genes and Attendant Regulatory Networks Involved in Plant Pathogenesis by Pseudomonas syringae pv. syringae B728a." PLOS ONE 11, no. 3 (2016): e0150234. http://dx.doi.org/10.1371/journal.pone.0150234.

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18

Zhang, J. H., N. B. Quigley, and D. C. Gross. "Analysis of the syrB and syrC genes of Pseudomonas syringae pv. syringae indicates that syringomycin is synthesized by a thiotemplate mechanism." Journal of bacteriology 177, no. 14 (1995): 4009–20. http://dx.doi.org/10.1128/jb.177.14.4009-4020.1995.

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19

Grandien, Bo. "Att se det som syns och som inte syns." Konsthistorisk Tidskrift/Journal of Art History 66, no. 4 (1997): 181–82. http://dx.doi.org/10.1080/00233609708604434.

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20

Little, E. L., R. M. Bostock, and B. C. Kirkpatrick. "Genetic Characterization of Pseudomonas syringae pv. syringae Strains from Stone Fruits in California." Applied and Environmental Microbiology 64, no. 10 (1998): 3818–23. http://dx.doi.org/10.1128/aem.64.10.3818-3823.1998.

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ABSTRACT Strains of Pseudomonas syringae pv. syringae were isolated from healthy and diseased stone fruit tissues sampled from 43 orchard sites in California in 1995 and 1996. These strains, together with P. syringae strains from other hosts and pathovars, were tested for pathogenicity and the presence of the syrBand syrC genes and were genetically characterized by using enterobacterial repetitive intergenic consensus (ERIC) primers and PCR. All 89 strains of P. syringae pv. syringae tested were moderately to highly pathogenic on Lovell peach seedlings regardless of the host of origin, while s

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21

Pearcy, Lee T., and H. S. Schibli. "Pherekydes of Syros." Classical World 85, no. 1 (1991): 65. http://dx.doi.org/10.2307/4351004.

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22

Lamberton, Robert. "Pherekydes of Syros." Ancient Philosophy 12, no. 2 (1992): 383–93. http://dx.doi.org/10.5840/ancientphil19921229.

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23

BAR-ASHER, M. "Le syro-palestinien." Journal Asiatique 276, no. 1 (1988): 27–59. http://dx.doi.org/10.2143/ja.276.1.2011525.

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24

Moore, Mike. "Too much SYFS." Bulletin of the Atomic Scientists 49, no. 7 (1993): 2. http://dx.doi.org/10.1080/00963402.1993.11456376.

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25

Wang, Xinbing, Yuxin Miao, Rui Dong, et al. "Economic Optimal Nitrogen Rate Variability of Maize in Response to Soil and Weather Conditions: Implications for Site-Specific Nitrogen Management." Agronomy 10, no. 9 (2020): 1237. http://dx.doi.org/10.3390/agronomy10091237.

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The dynamic interactions between soil, weather and crop management have considerable influences on crop yield within a region, and should be considered in optimizing nitrogen (N) management. The objectives of this study were to determine the influence of soil type, weather conditions and planting density on economic optimal N rate (EONR), and to evaluate the potential benefits of site-specific N management strategies for maize production. The experiments were conducted in two soil types (black and aeolian sandy soils) from 2015 to 2017, involving different N rates (0 to 300 kg ha−1) with three

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26

Gasic, Katarina, Andjelka Prokic, Milan Ivanovic, Nemanja Kuzmanovic, and Aleksa Obradovic. "Differentiation of Pseudomonas syringae pathovars originating from stone fruits." Pesticidi i fitomedicina 27, no. 3 (2012): 219–29. http://dx.doi.org/10.2298/pif1203219g.

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Due to an overlapping host range, similar symptomatology and many common characteristics, Pseudomonas syringae pathovars originating from stone fruits can easily be misidentified. In order to select tests for rapid and efficient differentiation of P. s. pvs. syringae, morsprunorum and persicae, we studied the suitability and differentiating potential of some standard bacteriological and molecular methods. Differentiation of the strains was performed using LOPAT, GATTa and ice nucleation tests, nutrient sucrose broth growth and utilization of various carbon sources. PCR method enabled the detec

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27

Beckman, Gary, and Dominik Bonatz. "Das syro-hethitische Grabdenkmal." Journal of the American Oriental Society 122, no. 4 (2002): 872. http://dx.doi.org/10.2307/3217643.

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28

Fox, David. "Syms Memorial Operating Pavilion." AORN Journal 71, no. 4 (2000): 785. http://dx.doi.org/10.1016/s0001-2092(06)62259-x.

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29

Achbasz, M., and Zofia Abkowicz. "Syry Trochnun - Tajemnica Trok." Awazymyz. Pismo historyczno-społeczno-kulturalne Karaimów, no. 2 (19) (September 30, 2008): 12. http://dx.doi.org/10.33229/az.347.

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30

Amaducci, Stefano. "HEMP-SYS." Journal of Industrial Hemp 8, no. 2 (2003): 79–83. http://dx.doi.org/10.1300/j237v08n02_06.

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31

Lu, Shi-En, Nian Wang, Jianlin Wang, Z. Jeffrey Chen, and Dennis C. Gross. "Oligonucleotide Microarray Analysis of the SalA Regulon Controlling Phytotoxin Production by Pseudomonas syringae pv. syringae." Molecular Plant-Microbe Interactions® 18, no. 4 (2005): 324–33. http://dx.doi.org/10.1094/mpmi-18-0324.

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The salA gene is a key regulatory element for syringomycin production by Pseudomonas syringae pv. syringae and encodes a member of the LuxR regulatory protein family. Previous studies revealed that salA, a member of the GacS/GacA signal transduction system, was required for bacterial virulence, syringomycin production, and expression of the syrB1 synthetase gene. To define the SalA regulon, the spotted oligonucleotide microarray was constructed using gene-specific 70-mer oligonucleotides of all open reading frames (ORFs) predicted in the syringomycin (syr) and syringopeptin (syp) gene clusters

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32

Guillorit, Christiane, and Régine Samson. "A Note: Serological study of four pathovars ofPseudomonas syringae: Ps. syr. aptata, Ps. syr. tabaci, Ps. syr. mors-prunorumandPs. syr. phaseolicola." Journal of Applied Bacteriology 74, no. 6 (1993): 683–87. http://dx.doi.org/10.1111/j.1365-2672.1993.tb05203.x.

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33

LEBRUN, René. "Syro Anatolica Scripta Minora I." Le Muséon 114, no. 3 (2001): 245–53. http://dx.doi.org/10.2143/mus.114.3.308.

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LEBRUN, René. "Syro Anatolica Scripta Minora II." Le Muséon 115, no. 1 (2002): 1–10. http://dx.doi.org/10.2143/mus.115.1.319.

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LEBRUN, René. "Syro Anatolica Scripta Minora III." Le Muséon 116, no. 1 (2003): 1–7. http://dx.doi.org/10.2143/mus.116.1.339.

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LEBRUN, R. "Syro Anatolica Scrypta Minora IV." Le Muséon 116, no. 3 (2003): 281–88. http://dx.doi.org/10.2143/mus.116.3.503664.

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LEBRUN, R. "Syro Anatolica Scripta Minora V." Le Muséon 117, no. 1 (2004): 1–5. http://dx.doi.org/10.2143/mus.117.1.504575.

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LEBRUN, R., M. MAYOZER, J. TROPPER, and J. P. VITA. "Syro Anatolica Scripta Minora VI." Le Muséon 118, no. 3 (2005): 209–17. http://dx.doi.org/10.2143/mus.118.3.2004460.

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LEBRUN, René, and Detlev GRODDEK. "Syro Anatolica Scripta Minora VII." Le Muséon 122, no. 1 (2009): 1–10. http://dx.doi.org/10.2143/mus.122.1.2037148.

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LEBRUN, René, and Jan TAVERNIER. "Syro Anatolica Scripta Minora VIII." Le Muséon 123, no. 1 (2010): 1–18. http://dx.doi.org/10.2143/mus.123.1.2052763.

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Smith-Erichsen, Nils, Johan Kofstad, and Baard Ingvaldsen. "Syre-base-forstyrrelser hos intensivpasienter." Tidsskrift for Den norske legeforening 130, no. 15 (2010): 1471–74. http://dx.doi.org/10.4045/tidsskr.09.0302.

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Gignac, Alain. "Bible et archéologie (syro-palestinienne)." Théologiques 21, no. 1 (2013): 7. http://dx.doi.org/10.7202/1025466ar.

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Rosival, Viktor. "Behandling av syre-base-forstyrrelser." Tidsskrift for Den norske legeforening 130, no. 22 (2010): 2221. http://dx.doi.org/10.4045/tidsskr.10.0929.

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Berthelot, Pierre. "L'avenir des relations syro-libanaises." Maghreb - Machrek 213, no. 3 (2012): 25. http://dx.doi.org/10.3917/machr.213.0025.

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Marblestone, H. ""Syrus in Tiberim Defluxit Orontes"." Mnemosyne 38, no. 1-2 (1985): 156–58. http://dx.doi.org/10.1163/156852585x00104.

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Halbertsma, Tjalling H. F., and Mark Dickens. "Inner Mongolian Syro-Turcica I." Monumenta Serica 66, no. 2 (2018): 279–302. http://dx.doi.org/10.1080/02549948.2018.1534353.

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Masetti-Rouault, Maria Grazia. "Religions du monde syro-mésopotamien." École pratique des hautes études. Section des sciences religieuses, no. 125 (September 1, 2018): 113–37. http://dx.doi.org/10.4000/asr.1854.

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Masetti-Rouault, Maria Grazia. "Religions du monde syro-mésopotamien." École pratique des hautes études. Section des sciences religieuses, no. 117 (October 1, 2010): 125–29. http://dx.doi.org/10.4000/asr.801.

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Margueron, Jean-Claude. "Urbanisme syro-mésopotamien et géométrie." Ktèma : civilisations de l'Orient, de la Grèce et de Rome antiques 35, no. 1 (2010): 207–29. http://dx.doi.org/10.3406/ktema.2010.2499.

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Wakefield, Gordon. "John Wesley and Ephraem Syrus." Hugoye: Journal of Syriac Studies 1, no. 1 (2010): 273–86. http://dx.doi.org/10.31826/hug-2010-010117.

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