Academic literature on the topic 'Tandem duplication'
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Journal articles on the topic "Tandem duplication"
Pluciennik, Anna, Ravi R. Iyer, Pawel Parniewski, and Robert D. Wells. "Tandem Duplication." Journal of Biological Chemistry 275, no. 37 (June 30, 2000): 28386–97. http://dx.doi.org/10.1074/jbc.m000154200.
Full textTakahashi, Tadashi, Atsushi Sato, Masahiro Ogawa, Yoshiki Hanya, and Tetsuya Oguma. "Targeted Tandem Duplication of a Large Chromosomal Segment in Aspergillus oryzae." Applied and Environmental Microbiology 80, no. 15 (May 16, 2014): 4547–58. http://dx.doi.org/10.1128/aem.00300-14.
Full textPan, Deng, and Liqing Zhang. "Tandemly Arrayed Genes in Vertebrate Genomes." Comparative and Functional Genomics 2008 (2008): 1–11. http://dx.doi.org/10.1155/2008/545269.
Full textLin, Ming-Tseh, Li-Hui Tseng, Katie Beierl, Antony Hsieh, Michele Thiess, Nadine Chase, Amanda Stafford, Mark J. Levis, James R. Eshleman, and Christopher D. Gocke. "Tandem Duplication PCR." Diagnostic Molecular Pathology 22, no. 3 (September 2013): 149–55. http://dx.doi.org/10.1097/pdm.0b013e31828308a1.
Full textBroughton, R. E., and T. E. Dowling. "Length variation in mitochondrial DNA of the minnow Cyprinella spiloptera." Genetics 138, no. 1 (September 1, 1994): 179–90. http://dx.doi.org/10.1093/genetics/138.1.179.
Full textNaseeb, Samina, Ryan M. Ames, Daniela Delneri, and Simon C. Lovell. "Rapid functional and evolutionary changes follow gene duplication in yeast." Proceedings of the Royal Society B: Biological Sciences 284, no. 1861 (August 23, 2017): 20171393. http://dx.doi.org/10.1098/rspb.2017.1393.
Full textFernandes, Gustavo, Mirela Souto, Frederico Costa, Edite Oliveira, and Bernardo Garicochea. "Familial Lymphoproliferative Malignancies and Tandem Duplication of NF1 Gene." Case Reports in Oncological Medicine 2014 (2014): 1–4. http://dx.doi.org/10.1155/2014/685857.
Full textBENSON, GARY. "Sequence Alignment with Tandem Duplication." Journal of Computational Biology 4, no. 3 (January 1997): 351–67. http://dx.doi.org/10.1089/cmb.1997.4.351.
Full textYang, J. "On Counting Tandem Duplication Trees." Molecular Biology and Evolution 21, no. 6 (February 12, 2004): 1160–63. http://dx.doi.org/10.1093/molbev/msh115.
Full textPenso-Dolfin, L., T. Wu, and C. D. Greenman. "The combinatorics of tandem duplication." Discrete Applied Mathematics 194 (October 2015): 1–22. http://dx.doi.org/10.1016/j.dam.2015.05.014.
Full textDissertations / Theses on the topic "Tandem duplication"
Bertrand, Denis. "Étude et inférence d'arbres de duplication en tandem." Montpellier 2, 2005. http://www.theses.fr/2005MON20180.
Full textDorrance, Adrienne M. "The Partial Tandem Duplication of the MLL (MLL PTD)in Leukemogenesis." The Ohio State University, 2008. http://rave.ohiolink.edu/etdc/view?acc_num=osu1203712889.
Full textDorrance, Adrienne M. "The role of the partial tandem duplication of the MLL (MLL PTD) in leukemogenesis." Columbus, Ohio : Ohio State University, 2007. http://rave.ohiolink.edu/etdc/view?acc%5Fnum=osu1203712889.
Full textAustin, Stephen J. "The prognostic significance of the mixed lineage leukaemia partial tandem duplication in acute myeloid leukaemia." Thesis, Cardiff University, 2010. http://orca.cf.ac.uk/54154/.
Full textAudemard, Eric. "Détection des duplications en tandem au niveau nucléique à l'aide de la théorie des flots." Toulouse 3, 2011. http://thesesups.ups-tlse.fr/1448/.
Full textAfter a quick introduction to molecular biology and more specifically tandem duplications, the thesis presents an overview of existing tools for detecting large scale homologuous regions, witha focus on anchor chaining methods. The thesis introduces a new graph-based general modelling formalism. A new chaining method, which is able to produce an optimal set of chains that satisfies specific consistency constraints that aim at easier interpretation is described, using minimum cost flow theory. This method is evaluated on segmental duplications detection in plants and then integrated in a pipeline targeted at tandem duplication detection directly from DNA. This tool is evaluated on the Arabidopsis thaliana genome and compared to the annotation, showing that it is able to detect tandem duplicated regions involving non coding elements
Sagit, Rauan. "Variation in length of proteins by repeats and disorder regions." Doctoral thesis, Stockholms universitet, Institutionen för biokemi och biofysik, 2013. http://urn.kb.se/resolve?urn=urn:nbn:se:su:diva-88553.
Full textAt the time of the doctoral defense, the following papers were unpublished and had a status as follows: Paper 2: In press. Paper 4: Manuscript.
Yavaş, Gökhan. "Algorithms for Characterizing Structural Variation in Human Genome." Case Western Reserve University School of Graduate Studies / OhioLINK, 2010. http://rave.ohiolink.edu/etdc/view?acc_num=case1279345476.
Full textGarcia, Joana Cristina. "Evolution of respiratory adaptations in hydrothermal vent scale-worms (Polynoidae)." Paris 6, 2009. http://hal.upmc.fr/tel-01112539.
Full textThomas, Antoine. "Problèmes de réarrangement avec marqueurs génomiques dupliqués." Phd thesis, Université des Sciences et Technologie de Lille - Lille I, 2014. http://tel.archives-ouvertes.fr/tel-01067114.
Full textMesser, Philipp W. [Verfasser]. "Tandem Duplications in the Human Genome / Philipp Messer." Berlin : Freie Universität Berlin, 2008. http://d-nb.info/102286713X/34.
Full textBooks on the topic "Tandem duplication"
Renner, Tanya, Tianying Lan, Kimberly M. Farr, Enrique Ibarra-Laclette, Luis Herrera-Estrella, Stephan C. Schuster, Mitsuyasu Hasebe, Kenji Fukushima, and Victor A. Albert. Carnivorous plant genomes. Oxford University Press, 2018. http://dx.doi.org/10.1093/oso/9780198779841.003.0011.
Full textBook chapters on the topic "Tandem duplication"
Taylor, William R., and Michael I. Sadowski. "Protein Products of Tandem Gene Duplication: A Structural View." In Evolution after Gene Duplication, 133–62. Hoboken, NJ, USA: John Wiley & Sons, Inc., 2011. http://dx.doi.org/10.1002/9780470619902.ch7.
Full textZhang, Louxin, Bin Ma, and Lusheng Wang. "Efficient Methods for Inferring Tandem Duplication History." In Lecture Notes in Computer Science, 97–111. Berlin, Heidelberg: Springer Berlin Heidelberg, 2002. http://dx.doi.org/10.1007/3-540-45784-4_8.
Full textBernt, Matthias, Ming-Chiang Chen, Daniel Merkle, Hung-Lung Wang, Kun-Mao Chao, and Martin Middendorf. "Finding All Sorting Tandem Duplication Random Loss Operations." In Combinatorial Pattern Matching, 301–13. Berlin, Heidelberg: Springer Berlin Heidelberg, 2009. http://dx.doi.org/10.1007/978-3-642-02441-2_27.
Full textBertrand, Denis, and Olivier Gascuel. "Topological Rearrangements and Local Search Method for Tandem Duplication Trees." In Lecture Notes in Computer Science, 374–87. Berlin, Heidelberg: Springer Berlin Heidelberg, 2004. http://dx.doi.org/10.1007/978-3-540-30219-3_32.
Full textCicalese, Ferdinando, and Nicolò Pilati. "The Tandem Duplication Distance Problem Is Hard over Bounded Alphabets." In Lecture Notes in Computer Science, 179–93. Cham: Springer International Publishing, 2021. http://dx.doi.org/10.1007/978-3-030-79987-8_13.
Full textSammeth, Michael, Thomas Weniger, Dag Harmsen, and Jens Stoye. "Alignment of Tandem Repeats with Excision, Duplication, Substitution and Indels (EDSI)." In Lecture Notes in Computer Science, 276–90. Berlin, Heidelberg: Springer Berlin Heidelberg, 2005. http://dx.doi.org/10.1007/11557067_23.
Full textElemento, Olivier, and Olivier Gascuel. "An Exact and Polynomial Distance-Based Algorithm to Reconstruct Single Copy Tandem Duplication Trees." In Combinatorial Pattern Matching, 96–108. Berlin, Heidelberg: Springer Berlin Heidelberg, 2003. http://dx.doi.org/10.1007/3-540-44888-8_8.
Full textChoi, Eun-Young, Keyur Patel, Marie Reine Haddad, Ling Yi, Courtney Holmes, David S. Goldstein, Amalia Dutra, Evgenia Pak, and Stephen G. Kaler. "Tandem Duplication of Exons 1–7 Neither Impairs ATP7A Expression Nor Causes a Menkes Disease Phenotype." In JIMD Reports, 57–63. Berlin, Heidelberg: Springer Berlin Heidelberg, 2014. http://dx.doi.org/10.1007/8904_2014_391.
Full textZhu, Binhai. "Tandem Duplications, Segmental Duplications and Deletions, and Their Applications." In Computer Science – Theory and Applications, 79–102. Cham: Springer International Publishing, 2020. http://dx.doi.org/10.1007/978-3-030-50026-9_6.
Full textPoulton, J., M. E. Deadman, M. Solymar, S. Ramcharan, and R. M. Gardiner. "Direct tandem duplications of mitochondrial DNA in mitochondrial myopathy." In Molecular Basis of Neurological Disorders and Their Treatment, 191–99. Dordrecht: Springer Netherlands, 1991. http://dx.doi.org/10.1007/978-94-011-3114-8_18.
Full textConference papers on the topic "Tandem duplication"
Benson, Gary. "Sequence alignment with tandem duplication." In the first annual international conference. New York, New York, USA: ACM Press, 1997. http://dx.doi.org/10.1145/267521.267526.
Full textJain, Siddharth, Farzad Farnoud, and Jehoshua Bruck. "Capacity and expressiveness of genomic tandem duplication." In 2015 IEEE International Symposium on Information Theory (ISIT). IEEE, 2015. http://dx.doi.org/10.1109/isit.2015.7282795.
Full textTang, Mengxiang, Michael Waterman, and Shibu Yooseph. "Zinc finger gene clusters and tandem gene duplication." In the fifth annual international conference. New York, New York, USA: ACM Press, 2001. http://dx.doi.org/10.1145/369133.369241.
Full textLiu, Xuan, Shing-Wan Choi, Thomas K. F. Wong, Tak-Wah Lam, and Siu-Ming Yiu. "Detection of novel tandem duplication with next-generation sequencing." In the 2nd ACM Conference. New York, New York, USA: ACM Press, 2011. http://dx.doi.org/10.1145/2147805.2147861.
Full textTang, Yuanyuan, and Farzad Farnoud. "Error-correcting Codes for Short Tandem Duplication and Substitution Errors." In 2020 IEEE International Symposium on Information Theory (ISIT). IEEE, 2020. http://dx.doi.org/10.1109/isit44484.2020.9174444.
Full textYehezkeally, Yonatan, and Moshe Schwartz. "Uncertainty of Reconstructing Multiple Messages from Uniform-Tandem-Duplication Noise." In 2020 IEEE International Symposium on Information Theory (ISIT). IEEE, 2020. http://dx.doi.org/10.1109/isit44484.2020.9174322.
Full textYehezkeally, Yonatan, and Moshe Schwartz. "Reconstruction Codes for DNA Sequences with Uniform Tandem-Duplication Errors." In 2018 IEEE International Symposium on Information Theory (ISIT). IEEE, 2018. http://dx.doi.org/10.1109/isit.2018.8437731.
Full textChaudhuri, Kamalika, Kevin Chen, Radu Mihaescu, and Satish Rao. "On the tandem duplication-random loss model of genome rearrangement." In the seventeenth annual ACM-SIAM symposium. New York, New York, USA: ACM Press, 2006. http://dx.doi.org/10.1145/1109557.1109619.
Full textSIROTININA, E. A., E. V. ROMANOVA, and D. YU SHERBAKOV. "TANDEM DUPLICATION RANDOM LOSS EVENTS INFLUENCED TO GENE ORDER CHANGES IN BAIKALIAN AMPHIPODS." In 5TH MOSCOW INTERNATIONAL CONFERENCE "MOLECULAR PHYLOGENETICSAND BIODIVERSITY BIOBANKING". TORUS PRESS, 2018. http://dx.doi.org/10.30826/molphy2018-71.
Full textHampton, Oliver A., Navin Rustagi, Jie Li, Liu Xi, Richard A. Gibbs, Sharon E. Plon, Marek Kimmel, and David A. Wheeler. "Abstract 4856: ITD Assembler: An algorithm for internal tandem duplication discovery from short-read sequencing data." In Proceedings: AACR 106th Annual Meeting 2015; April 18-22, 2015; Philadelphia, PA. American Association for Cancer Research, 2015. http://dx.doi.org/10.1158/1538-7445.am2015-4856.
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