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Journal articles on the topic 'Upogebia major'

Author: Grafiati

Published: 5 June 2025

Last updated: 2 August 2025

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1

Kato, Makoto, and Gyo Itani. "Commensalism of a Bivalve, Peregrinamor Ohshimai, With a Thalassinidean Burrowing Shrimp, Upogebia Major." Journal of the Marine Biological Association of the United Kingdom 75, no. 4 (1995): 941–47. http://dx.doi.org/10.1017/s0025315400038261.

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Ecological, behavioural and anatomical observations of a commensal bivalve, Peregrinamor ohshimai (Mollusca: Galeommatoidea), were carried out in a tidal mudflat in the Seto Inland Sea, Japan. The bivalve attached specifically to the longitudinal groove of the ventral side of the cephalothorax of thalassinidean burrowing shrimps, Upogebia major and Lf. narutensis (Crustacea: Decapoda), singly, dorso-ventrally and longitudinally, using its byssus, with its anterior part towards the head of the host. The mantle of the commensal bivalve has wide anterior (branchio-pedal) and narrow posterior (exh

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2

Kinoshita, Kyoko. "BURROW STRUCTURE OF THE MUD SHRIMP UPOGEBIA MAJOR (DECAPODA: THALASSINIDEA: UPOGEBIIDAE)." Journal of Crustacean Biology 22, no. 2 (2002): 474–80. http://dx.doi.org/10.1651/0278-0372(2002)022[0474:bsotms]2.0.co;2.

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3

Kinoshita, Kyoko. "Burrow Structure of the Mud Shrimp Upogebia Major (Decapoda: Thalassinidea: Upogebiidae)." Journal of Crustacean Biology 22, no. 2 (2002): 474–80. http://dx.doi.org/10.1163/20021975-99990255.

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4

Sun, Xiaoyue, and Jun He. "The complete mitochondrial genome and phylogenetic analysis of Upogebia major (De Haan, 1841)." Mitochondrial DNA Part B 6, no. 3 (2021): 970–71. http://dx.doi.org/10.1080/23802359.2020.1870898.

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5

MARIN, IVAN. "Redescription of the alpheid shrimp Betaeus levifrons Vinogradov, 1950 (Crustacea, Decapoda, Alpheidae) from Peter the Great Bay, Russian coast of the Sea of Japan." Zootaxa 2613, no. 1 (2010): 51. http://dx.doi.org/10.11646/zootaxa.2613.1.5.

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The originally poorly described alpheid shrimp Betaeus levifrons Vinogradov, 1950 is redescribed based on several adult specimens collected in the Vostok Bay (part of Peter the Great Bay) situated near Nakhodka City, about 90 km southwest from the type locality of the species, the Zolotoi Rog Bay, the Sea of Japan. The specimens were collected with the yabby pump from burrows on sandy-gravel bottom and appears to be associated with the burrowing mud-shrimps Upogebia major (De Haan, 1841) and U. issaeffi (Balss, 1914) (Upogebiidae).

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6

Batang, Zenon B., and Hiroshi Suzuki. "Gill-cleaning mechanisms of the burrowing thalassinidean shrimps Nihonotrypaea japonica and Upogebia major (Crustacea: Decapoda)." Journal of Zoology 261, no. 1 (2003): 69–77. http://dx.doi.org/10.1017/s0952836903003959.

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7

Селин, Н. И. "Зараженность макропаразитами рака-крота Upogebia major (De Haan, 1841) (Decapoda: Gebiidea) из залива Петра Великого Японского моря". Биология моря 45, № 5 (2019): 315–22. http://dx.doi.org/10.1134/s0134347519050103.

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8

Kitabatake, Kyosuke, Kentaro Izumi, Natsuko I. Kondo, and Kenji Okoshi. "Phylogeography and genetic diversity of the Japanese mud shrimp Upogebia major (Crustacea, Decapoda, Upogebiidae): Natural or anthropogenic dispersal?" ZooKeys 1182 (October 19, 2023): 259–87. http://dx.doi.org/10.3897/zookeys.1182.105030.

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Upogebia major (De Haan, 1841) is known for forming huge burrows in sandy, intertidal areas that can extend to depths of over 2 m. Despite its widespread distribution in East Asia and Russia, the genetic relatedness of its regional populations remains uncertain, likely owing to difficulties in specimen collection. Therefore, to appraise the phylogeographic patterns, genetic diversity, and morphological variety of U. major, the mitochondrial DNA of specimens collected from Japan, Korea and China were subjected to molecular phylogenetic analyses of COI genes, alongside morphological assessment.

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9

Kitabatake, Kyosuke, Kentaro Izumi, Natsuko I. Kondo, and Kenji Okoshi. "Phylogeography and genetic diversity of the Japanese mud shrimp Upogebia major (Crustacea, Decapoda, Upogebiidae): Natural or anthropogenic dispersal?" ZooKeys 1182 (October 19, 2023): 259–87. https://doi.org/10.3897/zookeys.1182.105030.

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<i>Upogebia major</i> (De Haan, 1841) is known for forming huge burrows in sandy, intertidal areas that can extend to depths of over 2 m. Despite its widespread distribution in East Asia and Russia, the genetic relatedness of its regional populations remains uncertain, likely owing to difficulties in specimen collection. Therefore, to appraise the phylogeographic patterns, genetic diversity, and morphological variety of <i>U. major</i>, the mitochondrial DNA of specimens collected from Japan, Korea and China were subjected to molecular phylogenetic analyses of COI genes, alongside morphologica

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10

Kinoshita, K., M. Wada, K. Kogure, and T. Furota. "Microbial activity and accumulation of organic matter in the burrow of the mud shrimp, Upogebia major (Crustacea: Thalassinidea)." Marine Biology 153, no. 3 (2007): 277–83. http://dx.doi.org/10.1007/s00227-007-0802-1.

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11

Kitabatake, Kyosuke, Kentaro Izumi, Natsuko Ito-Kondo, and Kenji Okoshi. "Sedimentary DNA is a promising indicator of the abundance of marine benthos: Insights from the burrowing decapod Upogebia major." PLOS ONE 20, no. 3 (2025): e0318235. https://doi.org/10.1371/journal.pone.0318235.

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Upogebia major (De Haan 1841) is a decapod widely distributed in tidal flats in East Asia and Russia and is a dominant species in some regions. Nevertheless, because the inhabiting deep burrows exceeding a depth of 2 m, conducting quantitative surveys is extremely challenging. These challenges are not unique to this species but are also common to infaunal marine benthos. Therefore, this study focuses on environmental DNA (eDNA). eDNA consists of DNA fragments present in water and sediments and serves as an indicator of the presence and abundance of organisms. In particular, sedimentary DNA (se

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12

Li, C., CE Reimers, and JW Chapman. "Microbiome analyses and presence of cable bacteria in the burrow sediment of Upogebia pugettensis." Marine Ecology Progress Series 648 (August 27, 2020): 79–94. http://dx.doi.org/10.3354/meps13421.

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We utilized methods of sediment cultivation, catalyzed reporter deposition-fluorescence in situ hybridization, scanning electron microscopy, and 16s rRNA gene sequencing to investigate the presence of novel filamentous cable bacteria (CB) in estuarine sediments bioturbated by the mud shrimp Upogebia pugettensis Dana and also to test for trophic connections between the shrimp, a commensal bivalve (Neaeromya rugifera), and the sediment. Agglutinated sediments from the linings of shrimp burrows exhibited higher abundances of CB compared to surrounding suboxic and anoxic sediments. Furthermore, CB

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13

Kang, B. J., T. Nanri, J. M. Lee, et al. "Vitellogenesis in both sexes of gonochoristic mud shrimp, Upogebia major (Crustacea): Analyses of vitellogenin gene expression and vitellogenin processing." Comparative Biochemistry and Physiology Part B: Biochemistry and Molecular Biology 149, no. 4 (2008): 589–98. http://dx.doi.org/10.1016/j.cbpb.2007.12.003.

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14

LEE, Gun-Ho, Soo-Jung CHANG, Sam-Kwang CHO, and Jae-Hee SONG. "Growth characteristics of Manila clams (Tapes philippinarum) grown in boxes to block mud shrimp (Upogebia major)." Journal of the Korean Society of Fisheries Technology 55, no. 4 (2019): 310–19. http://dx.doi.org/10.3796/ksfot.2019.55.4.310.

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15

Nanri, Takahiro, Mayuko Fukushige, Jonathan P. Ubaldo, et al. "Occurrence of abnormal sexual dimorphic structures in the gonochoristic crustacean, Upogebia major (Thalassinidea: Decapoda), inhabiting mud tidal flats in Japan." Journal of the Marine Biological Association of the United Kingdom 91, no. 5 (2010): 1049–57. http://dx.doi.org/10.1017/s0025315410001712.

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Normal females of the mud shrimp, Upogebia major, have a pair of pleopods on the first abdominal segment, while normal males do not. We have investigated nine populations in the Seto-Inland Sea, Japan, and found morphological disorders on the first abdominal segments of both males and females. In males, the first pleopods occurred. Morphology and arrangement of these additional pleopods were classified into four types. The pleopods of Types M-1 and M-2 were similar in structure to those of normal females. These males could be considered as de-masculinized individuals, and the occurrence of mal

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16

Song, Jae-Hee, Hyun-Mi Ahn, Hee-Do Jeung, Sang-Ok Chung, and Hee-Woong Kang. "Growth of two mud shrimps (Upogebia major and Austinogebia wuhsienweni) settled in Boryeong and Hongseong tidal flat." Environmental Biology Research 37, no. 2 (2019): 217–27. http://dx.doi.org/10.11626/kjeb.2019.37.2.217.

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17

Ubaldo, Jonathan P., Takahiro Nanri, Yoshitake Takada, and Masayuki Saigusa. "Prevalence and patterns of infection by the epicaridean parasite, Gyge ovalis and the emergence of intersex in the estuarine mud shrimp, Upogebia major." Journal of the Marine Biological Association of the United Kingdom 94, no. 3 (2013): 557–66. http://dx.doi.org/10.1017/s0025315413001392.

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A population of the mud shrimp, Upogebia major, inhabiting Kasaoka Inlet had a higher frequency of intersex males compared to other populations in the Seto Inland Sea, Japan. This population also featured a high prevalence of the branchial epicaridean parasite, Gyge ovalis, and inhabited a tidal flat characterized by increasingly softer sediments going into the lower tidal areas. We examined the rates at which infection co-occurred with intersex features and checked whether infection patterns varied with intersex occurrence according to host size and tidal level position. Fewer specimens were

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18

Kim, Sungtae, Cheol Yu, Chae-Lin Lee, Sukhyun Nam, and Jae-Sang Hong. "Population Characteristics of the Mud Shrimp Upogebia major (De Haan, 1841) (Decapoda: Gebiidea: Upogebiidae) on Korean Tidal Flats in the Eastern Yellow Sea." Journal of Marine Science and Engineering 11, no. 12 (2023): 2304. http://dx.doi.org/10.3390/jmse11122304.

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The population parameters of the ecologically important mud shrimp Upogebia major (De Haan, 1841) were analyzed from 2012 to 2015 in tidal flats in Seonjaedo and Jugyo on the west coast of Korea. The shrimp density averaged 265/m2 in Seonjaedo and 118/m2 in Jugyo. The sex ratio varied monthly, often male-biased, and, by size, males were significantly dominant, with a carapace length (CL) over 30 mm. Although the shrimp settled almost annually, only a single size-group was observed from 2012 to 2014. The recruitment in Jugyo in 2014 was notably successful, resulting in two cohorts persisting un

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19

Chapman, John, Jingchun Li, Michael McGowan, et al. "A doubled down invasion of the northeast Pacific by the Asian mud shrimp, Upogebia major and its coevolved bopyrid isopod parasite, Orthione griffenis." Aquatic Invasions 16, no. 4 (2021): 721–49. http://dx.doi.org/10.3391/ai.2021.16.4.09.

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20

Kinoshita, Kyoko, Satoko Nakayama, and Toshio Furota. "LIFE CYCLE CHARACTERISTICS OF THE DEEP-BURROWING MUD SHRIMP UPOGEBIA MAJOR (THALASSINIDEA: UPOGEBIIDAE) ON A TIDAL FLAT ALONG THE NORTHERN COAST OF TOKYO BAY." Journal of Crustacean Biology 23, no. 2 (2003): 318–27. http://dx.doi.org/10.1651/0278-0372(2003)023[0318:lccotd]2.0.co;2.

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21

Kinoshita, Kyoko, Toshio Furota, and Satoko Nakayama. "Life Cycle Characteristics of the Deep-Burrowing Mud Shrimp Upogebia Major (Thalassinidea: Upogebiidae) on a Tidal Flat Along the Northern Coast of Tokyo Bay." Journal of Crustacean Biology 23, no. 2 (2003): 318–27. http://dx.doi.org/10.1163/20021975-99990342.

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22

Selin, N. I. "Features of the spatial distribution of the Japanese mud shrimp Upogebia major (De Haan, 1841) (Decapoda: Upogebiidae) in the Vostok Bay, Sea of Japan." Russian Journal of Marine Biology 41, no. 3 (2015): 219–22. http://dx.doi.org/10.1134/s1063074015030086.

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23

Selin, N. I. "The population dynamics and growth of the mud shrimp Upogebia major (De Haan, 1841) (Crustacea: Decapoda) from Peter the Great Bay, Sea of Japan." Russian Journal of Marine Biology 43, no. 4 (2017): 270–75. http://dx.doi.org/10.1134/s1063074017040101.

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24

Selin, N. I. "The Prevalence of Macroparasite Infection in the Mud Shrimp Upogebia major (De Haan, 1841) (Decapoda: Gebiidea) from Peter the Great Bay, Sea of Japan." Russian Journal of Marine Biology 45, no. 5 (2019): 355–62. http://dx.doi.org/10.1134/s1063074019050109.

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25

Seo, Young Woo, and Juhyung Lee. "Effects of mud shrimp (<i>Upogebia major</i>) bioturbation on intertidal seagrass (<i>Zostera japonica</i>)." Environmental Biology Research 43, no. 2 (2025): 125–39. https://doi.org/10.11626/kjeb.2025.43.2.125.

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26

Sato, Masanori, Hiro'omi Uchida, Gyo Itani, and Hirofumi Yamashita. "Taxonomy and Life History of the Scale Worm Hesperonoe hwanghaiensis (Polychaeta: Polynoidae), newly Recorded in Japan, with Special Reference to Commensalism to a Burrowing Shrimp, Upogebia major." Zoological Science 18, no. 7 (2001): 981–91. http://dx.doi.org/10.2108/zsj.18.981.

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27

Seike, Koji, and Ryutaro Goto. "Trophic segregation in a burrow: the stable carbon and nitrogen isotope ratios of the burrowing shrimp Upogebia major and its commensal bivalve Cryptomya busoensis." Plankton and Benthos Research 15, no. 3 (2020): 220–27. http://dx.doi.org/10.3800/pbr.15.220.

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28

Hong, Jae-Sang. "Biology of the Mud Shrimp Upogebia major (de Haan, 1841), with Particular Reference to Pest Management for Shrimp Control in Manila Clam Bed in the West Coast of Korea." Ocean and Polar Research 35, no. 4 (2013): 323–49. http://dx.doi.org/10.4217/opr.2013.35.4.323.

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29

Hong, Jae-Sang, Chae-Lin Lee, and Gi-Sik Min. "Occurrence of Orthione griffenismarkham, 2004 (Isopoda: Bopyridae), parasite of the mud shrimp upogebia major(de Haan, 1841) in South Korean waters, and its implications with respect to marine bioinvasion." Journal of Crustacean Biology 35, no. 5 (2015): 605–15. http://dx.doi.org/10.1163/1937240x-00002361.

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30

SATO, Masanori, Toshiki IWANO, Gyo ITANI, Daisuke UENO, and Yasuhisa HENMI. "Species diversity and prevalence of ectosymbionts on the burrowing shrimp <i>Upogebia</i><i> major</i> in the Ariake and Yatsushiro Seas, Kyushu, Japan." Japanese Journal of Benthology 76 (December 25, 2021): 17–25. http://dx.doi.org/10.5179/benthos.76.17.

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31

Ahn, Hyun-Mi, Hyun-Sil Kang, Jae-Hee Song, Jae-Kwon Cho, Un-Ki Hwang, and Hee-Do Jeung. "Annual gametogenic cycles of female mud shrimp <i>Upogebia major</i> (de Haan, 1841) and <i>Austinogebia wuhsienweni</i> (Yu, 1931) on the west coast of Korea." Environmental Biology Research 41, no. 3 (2023): 298–307. http://dx.doi.org/10.11626/kjeb.2023.41.3.298.

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32

Baba, K. "Comments On The Proposed Conservation Of The Specific Names Of Gebia Major Capensis Krauss, 1843 And G. Africana Ortmann, 1894 (Currently Upogebia Capensis And U. Africana; Crustacea, Decapoda) By The Designation Of A Replacement Neotype For U. Capensis." Bulletin of zoological nomenclature. 50 (1993): 142–43. http://dx.doi.org/10.5962/bhl.part.1823.

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33

Wang, Chenghong, Yunqi Song, Jirui Zhang, et al. "Development and characterization of 177 SNP markers in the mud shrimp Upogebia major." Conservation Genetics Resources, January 20, 2022. http://dx.doi.org/10.1007/s12686-022-01252-9.

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34

"Commensalism of a bivalve, Peregrinamor ohshimai, with a thalassinidean burrowing shrimp, Upogebia major." Oceanographic Literature Review 43, no. 6 (1996): 590–91. https://doi.org/10.1016/0967-0653(96)83140-1.

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35

Henmi, Yumi, and Gyo Itani. "The first record of Betaeus levifrons (Decapoda: Caridea: Alpheidae) from the Pacific Coast of Japan, with remarks on symbiosis with Upogebia major." Journal of the Marine Biological Association of the United Kingdom 105 (2025). https://doi.org/10.1017/s0025315425100131.

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Abstract Five specimens of the rare alpheid shrimp Betaeus levifrons Vinogradov, 1950 were collected from the burrows of the mud-shrimp Upogebia major (De Haan, 1841) in Akkeshi and Usu Bays, along the Pacific coast of Hokkaido, Japan. As B. levifrons has been previously only reported from the Russian coast of the Sea of Japan, the Hokkaido specimens represent the first record of this species from the western Pacific coast as well as a new to the Japanese fauna. Ovigerous females of B. levifrons were recorded for the first time based on specimens. This study provides additional data on this sp

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