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Journal articles on the topic 'Chlamydomonas reinhardtii – Genetics'

Author: Grafiati

Published: 4 June 2021

Last updated: 30 January 2023

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1

Roesler, Keith R., and William L. Ogren. "Chlamydomonas reinhardtii Phosphoribulokinase." Plant Physiology 93, no. 1 (1990): 188–93. http://dx.doi.org/10.1104/pp.93.1.188.

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2

Stauber, Einar J., and Michael Hippler. "Chlamydomonas reinhardtii proteomics." Plant Physiology and Biochemistry 42, no. 12 (2004): 989–1001. http://dx.doi.org/10.1016/j.plaphy.2004.09.008.

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3

Lamb, Mary Rose, Susan K. Dutcher, Cathy K. Worley, and Carol L. Dieckmann. "Eyespot-Assembly Mutants in Chlamydomonas reinhardtii." Genetics 153, no. 2 (1999): 721–29. http://dx.doi.org/10.1093/genetics/153.2.721.

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Abstract Chlamydomonas reinhardtii is a single-celled green alga that phototaxes toward light by means of a light-sensitive organelle, the eyespot. The eyespot is composed of photoreceptor and Ca++-channel signal transduction components in the plasma membrane of the cell and reflective carotenoid pigment layers in an underlying region of the large chloroplast. To identify components important for the positioning and assembly of a functional eyespot, a large collection of nonphototactic mutants was screened for those with aberrant pigment spots. Four loci were identified. eye2 and eye3 mutants

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4

Kuchka, Michael R., and Jonathan W. Jarvik. "Short-Flagella Mutants of Chlamydomonas reinhardtii." Genetics 115, no. 4 (1987): 685–91. http://dx.doi.org/10.1093/genetics/115.4.685.

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ABSTRACT Six short-flagella mutants were isolated by screening clones of mutagenized Chlamydomonas for slow swimmers. The six mutants identify three unlinked Mendelian genes, with three mutations in gene shf-1, two in shf-2 and one in shf-3. shf-1 and shf-2 have been mapped to chromosomes VI and I, respectively. Two of the shf-1 mutations have temperature-sensitive flagellar-assembly phenotypes, and one shf-2 mutant has a cold-sensitive phenotype. shf shf double mutants were constructed; depending on the alleles present they showed either flagellaless or short-flagella phenotypes. Phenotypic r

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5

Porter, Mary E., Julie A. Knott, Steven H. Myster, and Samuel J. Farlow. "The Dynein Gene Family in Chlamydomonas reinhardtii." Genetics 144, no. 2 (1996): 569–85. http://dx.doi.org/10.1093/genetics/144.2.569.

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Abstract To correlate dynein heavy chain (Dhc) genes with flagellar mutations and gain insight into the function of specific dynein isoforms, we placed eight members of the Dhc gene family on the genetic map of Chlamydomonas. Using a PCR-based strategy, we cloned 11 Dhc genes from Chlamydomonas. Comparisons with other Dhc genes indicate that two clones correspond to genes encoding the alpha and beta heavy chains of the outer dynein arm. Alignment of the predicted amino acid sequences spanning the nucleotide binding site indicates that the remaining nine clones can be subdivided into three grou

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6

Shimogawara, Kosuke, Shoko Fujiwara, Arthur Grossman, and Hideaki Usuda. "High-Efficiency Transformation of Chlamydomonas reinhardtii by Electroporation." Genetics 148, no. 4 (1998): 1821–28. http://dx.doi.org/10.1093/genetics/148.4.1821.

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Abstract We have established a high-efficiency method for transforming the unicellular, green alga Chlamydomonas reinhardtii by electroporation. Electroporation of strains CC3395 and CC425, cell wall-less mutants devoid of argininosuccinate lyase (encoded by ARG7), in the presence of the plasmid pJD67 (which contains ARG7) was used to optimize conditions for the introduction of exogenous DNA. The conditions that were varied included osmolarity, temperature, concentration of exogenous DNA, voltage and capacitance. Following optimization, the maximum transformation frequency obtained was 2 × 105

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7

Dutcher, S. K., R. E. Galloway, W. R. Barclay, and G. Poortinga. "Tryptophan analog resistance mutations in Chlamydomonas reinhardtii." Genetics 131, no. 3 (1992): 593–607. http://dx.doi.org/10.1093/genetics/131.3.593.

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Abstract Forty single gene mutations in Chlamydomonas reinhardtii were isolated based on resistance to the compound 5'-methyl anthranilic acid (5-MAA). In other organisms, 5-MAA is converted to 5'-methyltryptophan (5-MT) and 5-MT is a potent inhibitor of anthranilate synthase, which catalyzes the first committed step in tryptophan biosynthesis. The mutant strains fall into two phenotypic classes based on the rate of cell division in the absence of 5-MAA. Strains with class I mutations divide more slowly than wild-type cells. These 17 mutations map to seven loci, which are designated MAA1 to MA

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8

Grossman, Arthur R. "Chlamydomonas reinhardtii and photosynthesis: genetics to genomics." Current Opinion in Plant Biology 3, no. 2 (2000): 132–37. http://dx.doi.org/10.1016/s1369-5266(99)00053-9.

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9

Ferris, P. J. "Characterization of a Chlamydomonas transposon, Gulliver, resembling those in higher plants." Genetics 122, no. 2 (1989): 363–77. http://dx.doi.org/10.1093/genetics/122.2.363.

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Abstract While pursuing a chromosomal walk through the mt+ locus of linkage group VI of Chlamydomonas reinhardtii, I encountered a 12-kb sequence that was found to be present in approximately 12 copies in the nuclear genome. Comparison of various C. reinhardtii laboratory strains provided evidence that the sequence was mobile and therefore a transposon. One of two separate natural isolates interfertile with C. reinhardtii, C. smithii (CC-1373), contained the transposon, but at completely different locations in its nuclear genome than C. reinhardtii; and a second, CC-1952 (S1-C5), lacked the tr

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10

Bennoun, P., M. Delosme, and U. Kück. "Mitochondrial genetics of Chlamydomonas reinhardtii: resistance mutations marking the cytochrome b gene." Genetics 127, no. 2 (1991): 335–43. http://dx.doi.org/10.1093/genetics/127.2.335.

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Abstract We describe the genetic and molecular analysis of the first non-Mendelian mutants of Chlamydomonas reinhardtii resistant to myxothiazol, an inhibitor of the respiratory cytochrome bc1 complex. Using a set of seven oligonucleotide probes, restriction fragments containing the mitochondrial cytochrome b (cyt b) gene from C. reinhardtii were isolated from a mitochondrial DNA library. This gene is located adjacent to the gene for subunit 4 of the mitochondrial NADH-dehydrogenase (ND4), near one end of the 15.8-kb linear mitochondrial genome of C. reinhardtii. The algal cytochrome b apoprot

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11

Beck, Christoph F., and Axel Acker. "Gametic Differentiation of Chlamydomonas reinhardtii." Plant Physiology 98, no. 3 (1992): 822–26. http://dx.doi.org/10.1104/pp.98.3.822.

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12

Tam, L. W., and P. A. Lefebvre. "Cloning of flagellar genes in Chlamydomonas reinhardtii by DNA insertional mutagenesis." Genetics 135, no. 2 (1993): 375–84. http://dx.doi.org/10.1093/genetics/135.2.375.

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Abstract Chlamydomonas is a popular genetic model system for studying many cellular processes. In this report, we describe a new approach to isolate Chlamydomonas genes using the cloned nitrate reductase gene (NIT1) as an insertional mutagen. A linearized plasmid containing the NIT1 gene was introduced into nit1 mutant cells by glass-bead transformation. Of 3000 Nit+ transformants examined, 74 showed motility defects of a wide range of phenotypes, suggesting that DNA transformation is an effective method for mutagenizing cells. For 13 of 15 such motility mutants backcrossed to nit- mutant stra

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13

Herron, Matthew D., William C. Ratcliff, Jacob Boswell, and Frank Rosenzweig. "Genetics of a de novo origin of undifferentiated multicellularity." Royal Society Open Science 5, no. 8 (2018): 180912. http://dx.doi.org/10.1098/rsos.180912.

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The evolution of multicellularity was a major transition in evolution and set the stage for unprecedented increases in complexity, especially in land plants and animals. Here, we explore the genetics underlying a de novo origin of multicellularity in a microbial evolution experiment carried out on the green alga Chlamydomonas reinhardtii . We show that large-scale changes in gene expression underlie the transition to a multicellular life cycle. Among these, changes to genes involved in cell cycle and reproductive processes were overrepresented, as were changes to C. reinhardtii -specific and v

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14

Dayer, Régine, Beat B. Fischer, Rik I. L. Eggen, and Stéphane D. Lemaire. "The Peroxiredoxin and Glutathione Peroxidase Families in Chlamydomonas reinhardtii." Genetics 179, no. 1 (2008): 41–57. http://dx.doi.org/10.1534/genetics.107.086041.

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15

Figueroa-Martínez, Francisco, Soledad Funes, Lars-Gunnar Franzén, and Diego González-Halphen. "Reconstructing the Mitochondrial Protein Import Machinery of Chlamydomonas reinhardtii." Genetics 179, no. 1 (2008): 149–55. http://dx.doi.org/10.1534/genetics.108.087965.

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16

Ness, Rob W., Andrew D. Morgan, Nick Colegrave, and Peter D. Keightley. "Estimate of the Spontaneous Mutation Rate in Chlamydomonas reinhardtii." Genetics 192, no. 4 (2012): 1447–54. http://dx.doi.org/10.1534/genetics.112.145078.

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17

Barsel, S. E., D. E. Wexler, and P. A. Lefebvre. "Genetic analysis of long-flagella mutants of Chlamydomonas reinhardtii." Genetics 118, no. 4 (1988): 637–48. http://dx.doi.org/10.1093/genetics/118.4.637.

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Abstract The length of the flagella of Chlamydomonas reinhardtii cells is tightly regulated; both short-flagella and long-flagella mutants have been described. This report characterizes ten long-flagella mutants, including five newly isolated mutants, to determine the number of different loci conferring this phenotype, and to study interactions of mutants at different loci. The mutants, each of which was recessive in heterozygous diploids with wild type, fall into three unlinked complementation groups. One of these defines a new gene, lf3, which maps near the centromere of linkage group I. The

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18

Podstavková, S., E. Miadoková, and D. Vlček. "Repair-deficient mutants of Chlamydomonas reinhardtii." Mutation Research/Environmental Mutagenesis and Related Subjects 271, no. 2 (1992): 150. http://dx.doi.org/10.1016/0165-1161(92)91168-q.

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19

Remacle, C., F. Duby, P. Cardol, and R. F. Matagne. "Mutations inactivating mitochondrial genes in Chlamydomonas reinhardtii." Biochemical Society Transactions 29, no. 4 (2001): 442–46. http://dx.doi.org/10.1042/bst0290442.

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Chlamydomonas reinhardtii is now becoming a useful model for the study of mitochondrial genetics in a photosynthetic organism. The small (15.8 kb) mitochondrial genome C. reinhardtii has been sequenced completely and all the genes have been identified. Several mutants inactivated in mitochondrial genes encoding components of the respiratory complexes I, III and IV have been characterized at the molecular level. Assembly of complex I in several mutant strains and mapping of mitochondrial mutations by recombinational analysis are also described.

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20

Goldschmidt-Clermont, Michel, Jacqueline Girard-Bascou, Yves Choquet, and Jean-David Rochaix. "Trans-splicing mutants of Chlamydomonas reinhardtii." Molecular and General Genetics MGG 223, no. 3 (1990): 417–25. http://dx.doi.org/10.1007/bf00264448.

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21

Mukherjee, Ananya. "State Transition Regulation in Chlamydomonas reinhardtii." Plant Physiology 183, no. 4 (2020): 1418–19. http://dx.doi.org/10.1104/pp.20.00814.

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22

Suzuki, Kensaku, Laura Fredrick Marek, and Martin H. Spalding. "A Photorespiratory Mutant of Chlamydomonas reinhardtii." Plant Physiology 93, no. 1 (1990): 231–37. http://dx.doi.org/10.1104/pp.93.1.231.

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23

Klein, Uwe. "Intracellular Carbon Partitioning in Chlamydomonas reinhardtii." Plant Physiology 85, no. 4 (1987): 892–97. http://dx.doi.org/10.1104/pp.85.4.892.

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24

Manuel, Livingston J., and James V. Moroney. "Inorganic Carbon Accumulation by Chlamydomonas reinhardtii." Plant Physiology 88, no. 2 (1988): 491–96. http://dx.doi.org/10.1104/pp.88.2.491.

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25

Muñoz-Blanco, J. "Glutamate dehydrogenase isozymes of Chlamydomonas reinhardtii." FEMS Microbiology Letters 61, no. 3 (1989): 315–18. http://dx.doi.org/10.1016/0378-1097(89)90217-6.

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26

Holmes, J. A., D. E. Johnson, and S. K. Dutcher. "Linkage group XIX of Chlamydomonas reinhardtii has a linear map." Genetics 133, no. 4 (1993): 865–74. http://dx.doi.org/10.1093/genetics/133.4.865.

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Abstract Linkage group XIX (or the UNI linkage group) of Chlamydomonas reinhardtii has been reported to show a circular meiotic recombination map. A circular map predicts the existence of strong chiasma and chromatid interference, which would lead to an excess number of two-strand double crossovers during meiosis. We have tested this prediction in multipoint crosses. Our results are consistent with a linear linkage group that shows positive chiasma interference and no chromatid interference. Chiasma interference occurs both within arms and across the centromere. Of the original loci that contr

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27

McCarthy, Sarah S., Marilyn C. Kobayashi, and Krishna K. Niyogi. "White Mutants of Chlamydomonas reinhardtii Are Defective in Phytoene Synthase." Genetics 168, no. 3 (2004): 1249–57. http://dx.doi.org/10.1534/genetics.104.030635.

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28

Ferris, Patrick J., E. Virginia Armbrust, and Ursula W. Goodenough. "Genetic Structure of the Mating-Type Locus of Chlamydomonas reinhardtii." Genetics 160, no. 1 (2002): 181–200. http://dx.doi.org/10.1093/genetics/160.1.181.

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Abstract Portions of the cloned mating-type (MT) loci (mt+ and mt−) of Chlamydomonas reinhardtii, defined as the ~1-Mb domains of linkage group VI that are under recombinational suppression, were subjected to Northern analysis to elucidate their coding capacity. The four central rearranged segments of the loci were found to contain both housekeeping genes (expressed during several life-cycle stages) and mating-related genes, while the sequences unique to mt+ or mt− carried genes expressed only in the gametic or zygotic phases of the life cycle. One of these genes, Mtd1, is a candidate particip

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29

Hodson, R. C., and P. M. Gresshoff. "Fluoroacetamide resistance mutations in Chlamydomonas reinhardtii." Archives of Microbiology 148, no. 1 (1987): 8–13. http://dx.doi.org/10.1007/bf00429639.

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30

Gloeckner, G., and C. F. Beck. "Genes involved in light control of sexual differentiation in Chlamydomonas reinhardtii." Genetics 141, no. 3 (1995): 937–43. http://dx.doi.org/10.1093/genetics/141.3.937.

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Abstract Gamete formation requires the sequential action of two extrinsic cues, nitrogen deprivation and blue light. The mutants described here are specifically altered in the light-dependent step. Mutations lrg1, lrg3, and lrg4 overcome this light dependence while mutation lrg2 results in a delayed execution of the light-mediated step. The four mutations are linked. The recessive nature of the lrg1, lrg3, and lrg4 mutations implies that they encode elements of negative control in this light response pathway. Analyses of diploids suggest an interaction between the gene products of the mutated

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31

Moroney, James V., Barbara J. Wilson, and N. E. Tolbert. "Glycolate Metabolism and Excretion by Chlamydomonas reinhardtii." Plant Physiology 82, no. 3 (1986): 821–26. http://dx.doi.org/10.1104/pp.82.3.821.

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32

Newman, S. M., E. H. Harris, A. M. Johnson, J. E. Boynton, and N. W. Gillham. "Nonrandom distribution of chloroplast recombination events in Chlamydomonas reinhardtii: evidence for a hotspot and an adjacent cold region." Genetics 132, no. 2 (1992): 413–29. http://dx.doi.org/10.1093/genetics/132.2.413.

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Abstract Intermolecular recombination of Chlamydomonas chloroplast genes has been analyzed in sexual crosses and following biolistic transformation. The pattern and position of specific exchange events within 15 kb of the 22-kb inverted repeat have been mapped with respect to known restriction fragment length polymorphism markers that distinguish the chloroplast genomes of the interfertile species Chlamydomonas reinhardtii and Chlamydomonas smithii. Recombinant progeny were selected from two- and three-factor crosses involving point mutations conferring herbicide (dr) and antibiotic resistance

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33

Virolainen, Pavel A., and Elena M. Chekunova. "Optimization of CRISPR/Cas9 method for transgenesis of model microalgae <i>Chlamydomonas reinhardtii</i>." Ecological genetics 20, no. 1S (2022): 42–43. http://dx.doi.org/10.17816/ecogen112332.

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In this work we knocked out the LTS3 gene of the microalgae Chlamydomonas reinhardtii using the TIM technique optimized for the available equipment. We achieved transformation efficiency of 68.8%, knockout of this gene lead to the death of C. reinhardtii cells after several division cycles. The creation and study of genetically modified organisms in fundamental research allows a deeper understanding of the basic processes in the cells with the prospect of further applying this knowledge in practice. Microalgae are an interesting object for genetic engineering because of the great prospec

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34

Lee, Robert W., and Claude Lemieux. "BIPARENTAL INHERITANCE OF NON-MENDELIAN GENE MARKERS IN CHLAMYDOMONAS MOEWUSII." Genetics 113, no. 3 (1986): 589–600. http://dx.doi.org/10.1093/genetics/113.3.589.

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ABSTRACT The first two non-Mendelian gene mutations to be identified in Chlamydomonas moewusii are described. These putative chloroplast gene mutations include one for resistance to streptomycin (sr-nM1) and one for resistance to erythromycin (er-nM1). In one- and two-factor reciprocal crosses, usually over 90% of the germinating zygospores transmitted these mutations and their wild-type alternatives from both parents (biparental zygospores); the remaining zygospores transmitted exclusively the non-Mendelian markers of the mating-type "plus" parent. Among the biparental zygospores, a strong bi

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35

Mahan, Kristina M., Obed W. Odorn, and David L. Herrin. "Controlling fungal contamination in Chlamydomonas reinhardtii cultures." BioTechniques 39, no. 4 (2005): 457–58. http://dx.doi.org/10.2144/000112022.

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36

Schimmer, Oskar, and Irmgard Kühne. "Furoquinoline alkaloids as photosensitizers in Chlamydomonas reinhardtii." Mutation Research/Fundamental and Molecular Mechanisms of Mutagenesis 249, no. 1 (1991): 105–10. http://dx.doi.org/10.1016/0027-5107(91)90136-c.

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37

Loppes, Roland, and Ralph Heindricks. "New arginine-requiring mutants in Chlamydomonas reinhardtii." Archives of Microbiology 143, no. 4 (1986): 348–52. http://dx.doi.org/10.1007/bf00412801.

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38

Roberts, Douglas G. W., Mary Rose Lamb, and Carol L. Dieckmann. "Characterization of the EYE2 Gene Required for Eyespot Assembly in Chlamydomonas reinhardtii." Genetics 158, no. 3 (2001): 1037–49. http://dx.doi.org/10.1093/genetics/158.3.1037.

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Abstract The unicellular biflagellate green alga Chlamydomonas reinhardtii can perceive light and respond by altering its swimming behavior. The eyespot is a specialized structure for sensing light, which is assembled de novo at every cell division from components located in two different cellular compartments. Photoreceptors and associated signal transduction components are localized in a discrete patch of the plasma membrane. This patch is tightly packed against an underlying sandwich of chloroplast membranes and carotenoid-filled lipid granules, which aids the cell in distinguishing light d

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39

Dutcher, S. K., W. Gibbons, and W. B. Inwood. "A genetic analysis of suppressors of the PF10 mutation in Chlamydomonas reinhardtii." Genetics 120, no. 4 (1988): 965–76. http://dx.doi.org/10.1093/genetics/120.4.965.

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Abstract A mutation at the PF10 locus of the unicellular green alga Chlamydomonas reinhardtii leads to abnormal cell motility. The asymmetric form of the ciliary beat stroke characteristic of wild-type flagella is modified by this mutation to a nearly symmetric beat. We report here that this abnormal motility is a conditional phenotype that depends on light intensity. In the absence of light or under low light intensities, the motility is more severely impaired than at higher light intensities. By UV mutagenesis we obtained 11 intragenic and 70 extragenic strains that show reversion of the pf1

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40

Pandey, Manishi, Gary D. Stormo, and Susan K. Dutcher. "Alternative Splicing During the Chlamydomonasreinhardtii Cell Cycle." G3: Genes|Genomes|Genetics 10, no. 10 (2020): 3797–810. http://dx.doi.org/10.1534/g3.120.401622.

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Genome-wide analysis of transcriptome data in Chlamydomonas reinhardtii shows periodic patterns in gene expression levels when cultures are grown under alternating light and dark cycles so that G1 of the cell cycle occurs in the light phase and S/M/G0 occurs during the dark phase. However, alternative splicing, a process that enables a greater protein diversity from a limited set of genes, remains largely unexplored by previous transcriptome based studies in C. reinhardtii. In this study, we used existing longitudinal RNA-seq data obtained during the light-dark cycle to investigate the changes

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41

Bult�, L., and P. Bennoun. "Translational accuracy and sexual differentiation in Chlamydomonas reinhardtii." Current Genetics 18, no. 2 (1990): 155–60. http://dx.doi.org/10.1007/bf00312603.

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42

Cahoon, A. Bruce, and Ali A. Qureshi. "Leaderless mRNAs are circularized in Chlamydomonas reinhardtii mitochondria." Current Genetics 64, no. 6 (2018): 1321–33. http://dx.doi.org/10.1007/s00294-018-0848-2.

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43

Newman, Scott M., Nicholas W. Gillham, Elizabeth H. Harris, Anita M. Johnson, and John E. Boynton. "Targeted disruption of chloroplast genes in Chlamydomonas reinhardtii." Molecular and General Genetics MGG 230, no. 1-2 (1991): 65–74. http://dx.doi.org/10.1007/bf00290652.

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44

Hall, Leo M., Kenneth B. Taylor, and Daniel D. Jones. "Expression of a foreign gene in Chlamydomonas reinhardtii." Gene 124, no. 1 (1993): 75–81. http://dx.doi.org/10.1016/0378-1119(93)90763-s.

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45

Pineda, Manuel, Purificaci�n Cabello, and Jacobo C�rdenas. "Ammonium regulation of urate uptake in Chlamydomonas reinhardtii." Planta 171, no. 4 (1987): 496–500. http://dx.doi.org/10.1007/bf00392297.

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46

von Gromoff, Erika D., and Christoph F. Beck. "Genes expressed during sexual differentiation of Chlamydomonas reinhardtii." Molecular and General Genetics MGG 241-241, no. 3-4 (1993): 415–21. http://dx.doi.org/10.1007/bf00284695.

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47

Cole, Douglas G. "The Intraflagellar Transport Machinery of Chlamydomonas reinhardtii." Traffic 4, no. 7 (2003): 435–42. http://dx.doi.org/10.1034/j.1600-0854.2003.t01-1-00103.x.

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48

Franz, Sophie, Elisabeth Ignatz, Sandra Wenzel, et al. "Structure of the bifunctional cryptochrome aCRY from Chlamydomonas reinhardtii." Nucleic Acids Research 46, no. 15 (2018): 8010–22. http://dx.doi.org/10.1093/nar/gky621.

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49

Schnell, R. A., and P. A. Lefebvre. "Isolation of the Chlamydomonas regulatory gene NIT2 by transposon tagging." Genetics 134, no. 3 (1993): 737–47. http://dx.doi.org/10.1093/genetics/134.3.737.

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Abstract Genetic evidence suggests that the NIT2 gene of Chlamydomonas reinhardtii encodes a positive regulator of the nitrate-assimilation pathway. To learn more about the function of the NIT2 gene product, we isolated the gene using a transposon-tagging strategy. A nit2 mutation caused by the insertion of a transposon was identified by testing spontaneous nit2 mutants for the presence of new copies of Gulliver or TOC1, transposable elements that have been identified in Chlamydomonas. In 2 of the 14 different mutants that were analyzed, a Gulliver element was found to be genetically and pheno

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50

Dionisio-Sese, Maribel L., Hideya Fukuzawa, and Shigetoh Miyachi. "Light-Induced Carbonic Anhydrase Expression in Chlamydomonas reinhardtii." Plant Physiology 94, no. 3 (1990): 1103–10. http://dx.doi.org/10.1104/pp.94.3.1103.

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