Academic literature on the topic 'Genealogical concordance'

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Journal articles on the topic "Genealogical concordance"

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Venter, Stephanus N., Marike Palmer, Chrizelle W. Beukes, et al. "Practically delineating bacterial species with genealogical concordance." Antonie van Leeuwenhoek 110, no. 10 (2017): 1311–25. http://dx.doi.org/10.1007/s10482-017-0869-8.

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Walker, M. L. "Genealogical Concordance and the Specific Status of Peromyscus sejugis." Journal of Heredity 97, no. 4 (2006): 340–45. http://dx.doi.org/10.1093/jhered/esl007.

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Atchley, W. R., S. Newman, and D. E. Cowley. "Genetic divergence in mandible form in relation to molecular divergence in inbred mouse strains." Genetics 120, no. 1 (1988): 239–53. http://dx.doi.org/10.1093/genetics/120.1.239.

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Abstract Genetic divergence in the form of the mandible is examined in ten inbred strains of mice. Several univariate and multivariate genetic distance estimates are given for the morphological data and these estimates are compared to measures of genealogical and molecular divergence. Highly significant divergence occurs among the ten strains in all 11 mandible traits considered individually and simultaneously. Genealogical relationship among strains is highly correlated with genetic divergence in single locus molecular traits. However, the concordance between genealogical relationship and mul
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Hilário, Sandra, Micael F. M. Gonçalves, and Artur Alves. "Using Genealogical Concordance and Coalescent-Based Species Delimitation to Assess Species Boundaries in the Diaporthe eres Complex." Journal of Fungi 7, no. 7 (2021): 507. http://dx.doi.org/10.3390/jof7070507.

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DNA sequence analysis has been of the utmost importance to delimit species boundaries in the genus Diaporthe. However, the common practice of combining multiple genes, without applying the genealogical concordance criterion has complicated the robust delimitation of species, given that phylogenetic incongruence between loci has been disregarded. Despite the several attempts to delineate the species boundaries in the D. eres complex, the phylogenetic limits within this complex remain unclear. In order to bridge this gap, we employed the Genealogical Phylogenetic Species Recognition principle (G
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Laurence, Matthew H., Brett A. Summerell, Lester W. Burgess, and Edward C. Y. Liew. "Genealogical concordance phylogenetic species recognition in the Fusarium oxysporum species complex." Fungal Biology 118, no. 4 (2014): 374–84. http://dx.doi.org/10.1016/j.funbio.2014.02.002.

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Minh, Bui Quang, Matthew W. Hahn, and Robert Lanfear. "New Methods to Calculate Concordance Factors for Phylogenomic Datasets." Molecular Biology and Evolution 37, no. 9 (2020): 2727–33. http://dx.doi.org/10.1093/molbev/msaa106.

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Abstract We implement two measures for quantifying genealogical concordance in phylogenomic data sets: the gene concordance factor (gCF) and the novel site concordance factor (sCF). For every branch of a reference tree, gCF is defined as the percentage of “decisive” gene trees containing that branch. This measure is already in wide usage, but here we introduce a package that calculates it while accounting for variable taxon coverage among gene trees. sCF is a new measure defined as the percentage of decisive sites supporting a branch in the reference tree. gCF and sCF complement classical meas
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Peterson, Stephen W., and Željko Jurjević. "Talaromyces columbinus sp. nov., and Genealogical Concordance Analysis in Talaromyces Clade 2a." PLoS ONE 8, no. 10 (2013): e78084. http://dx.doi.org/10.1371/journal.pone.0078084.

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Gollmann, Günter. "Species concepts: a contrast of viewpoints." Amphibia-Reptilia 17, no. 4 (1996): 295–301. http://dx.doi.org/10.1163/156853896x00018.

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AbstractSome fundamental contrasts underlying the disputes about species concepts are outlined: nominalistic versus essentialistic viewpoints, relations of pattern and process, and incongruities of population genetic, ecological, and phylogenetic approaches. The biological, evolutionary and phylogenetic species concepts are briefly characterized. Attention is drawn to the cohesion concept of species and to genealogical concordance principles, which attempt to integrate elements of those concepts with advances in population biological and evolutionary genetic theory.
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Maniatsi, Stefania, Ilias Kappas, Athanasios Baxevanis, Theodora Farmaki, and Theodore Abatzopoulos. "Sharp Phylogeographic Breaks and Patterns of Genealogical Concordance in the Brine Shrimp Artemia franciscana." International Journal of Molecular Sciences 10, no. 12 (2009): 5455–70. http://dx.doi.org/10.3390/ijms10125455.

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Sarver, Brice A. J., Todd J. Ward, Liane R. Gale, et al. "Novel Fusarium head blight pathogens from Nepal and Louisiana revealed by multilocus genealogical concordance." Fungal Genetics and Biology 48, no. 12 (2011): 1096–107. http://dx.doi.org/10.1016/j.fgb.2011.09.002.

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Dissertations / Theses on the topic "Genealogical concordance"

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Brown, Elizabeth Michelle Pallette. "Molecular Genetic Insights into the Dimorphic Fungal Pathogen Blastomyces dermatitidis." Thesis, 2012. http://hdl.handle.net/1807/33719.

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The epidemiology of blastomycosis remains poorly understood in part due to the lack of a robust and discriminatory strain typing method for Blastomyces dermatitidis. Here we describe the development of a multilocus sequence (MLST) method to study the genetic variation and population structure of B. dermatitidis. Eighty geographically diverse clinical and environmental isolates were examined. Thirty-six unique sequence types were identified. With a discriminatory index of 91.4%, MLST identifies significant genetic diversity for the characterization of local and global B. dermatitidis isol
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Book chapters on the topic "Genealogical concordance"

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"GENEALOGICAL CONCORDANCE." In Phylogeography. Harvard University Press, 2000. http://dx.doi.org/10.2307/j.ctv1nzfgj7.8.

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