Relevant bibliographies by topics / Genome structure

Contents

  1. Journal articles
  2. Dissertations / Theses
  3. Books
  4. Book chapters
  5. Conference papers
  6. Reports

Academic literature on the topic 'Genome structure'

Author: Grafiati
Published: 4 June 2021
Last updated: 25 July 2025

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Journal articles on the topic "Genome structure"

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Kim, Sang-Chul, Young-Ho Ha, Beom Kyun Park, et al. "Comparative analysis of the complete chloroplast genome of Papaveraceae to identify rearrangements within the Corydalis chloroplast genome." PLOS ONE 18, no. 9 (2023): e0289625. http://dx.doi.org/10.1371/journal.pone.0289625.

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Chloroplast genomes are valuable for inferring evolutionary relationships. We report the complete chloroplast genomes of 36 Corydalis spp. and one Fumaria species. We compared these genomes with 22 other taxa and investigated the genome structure, gene content, and evolutionary dynamics of the chloroplast genomes of 58 species, explored the structure, size, repeat sequences, and divergent hotspots of these genomes, conducted phylogenetic analysis, and identified nine types of chloroplast genome structures among Corydalis spp. The ndh gene family suffered inversion and rearrangement or was lost
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Khaitovich, A. B. "CORONAVIRUS (GENOME STRUCTURE, REPLICATION)." Crimea Journal of Experimental and Clinical Medicine 10, no. 4 (2021): 78–95. http://dx.doi.org/10.37279/2224-6444-2020-10-4-78-95.

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The overview presented in the article is a continuation of the publication on coronaviruses. The paper examines modern data on the structure of the genome and the replication process in various types of coronaviruses that cause diseases in humans and are of medical importance. The structure of the genomes of coronaviruses and the functions of genes that encode the structure of viral particles are presented; describes the function of structural genes and auxiliary genes; the role of genes encoding non-structural proteins in the structure of the viral particle and replication of coronaviruses is
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Mauger, David M., Michael Golden, Daisuke Yamane, et al. "Functionally conserved architecture of hepatitis C virus RNA genomes." Proceedings of the National Academy of Sciences 112, no. 12 (2015): 3692–97. http://dx.doi.org/10.1073/pnas.1416266112.

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Hepatitis C virus (HCV) infects over 170 million people worldwide and is a leading cause of liver disease and cancer. The virus has a 9,650-nt, single-stranded, messenger-sense RNA genome that is infectious as an independent entity. The RNA genome has evolved in response to complex selection pressures, including the need to maintain structures that facilitate replication and to avoid clearance by cell-intrinsic immune processes. Here we used high-throughput, single-nucleotide resolution information to generate and functionally test data-driven structural models for three diverse HCV RNA genome
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Bernaola-Galván, Pedro, Pedro Carpena, Cristina Gómez-Martín, and Jose L. Oliver. "Compositional Structure of the Genome: A Review." Biology 12, no. 6 (2023): 849. http://dx.doi.org/10.3390/biology12060849.

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As the genome carries the historical information of a species’ biotic and environmental interactions, analyzing changes in genome structure over time by using powerful statistical physics methods (such as entropic segmentation algorithms, fluctuation analysis in DNA walks, or measures of compositional complexity) provides valuable insights into genome evolution. Nucleotide frequencies tend to vary along the DNA chain, resulting in a hierarchically patchy chromosome structure with heterogeneities at different length scales that range from a few nucleotides to tens of millions of them. Fluctuati
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Andrzejewska, Angelika, Małgorzata Zawadzka, Julita Gumna, David J. Garfinkel, and Katarzyna Pachulska-Wieczorek. "In vivostructure of the Ty1 retrotransposon RNA genome." Nucleic Acids Research 49, no. 5 (2021): 2878–93. http://dx.doi.org/10.1093/nar/gkab090.

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AbstractLong terminal repeat (LTR)-retrotransposons constitute a significant part of eukaryotic genomes and influence their function and evolution. Like other RNA viruses, LTR-retrotransposons efficiently utilize their RNA genome to interact with host cell machinery during replication. Here, we provide the first genome-wide RNA secondary structure model for a LTR-retrotransposon in living cells. Using SHAPE probing, we explore the secondary structure of the yeast Ty1 retrotransposon RNA genome in its native in vivo state and under defined in vitro conditions. Comparative analyses reveal the st
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Mukherjee, Partha, Youakim Badr, Srushti Karvekar, and Shanmugapriya Viswanathan. "Coronavirus Genome Sequence Similarity and Protein Sequence Classification." Journal of Digital Science 3, no. 2 (2021): 3–18. http://dx.doi.org/10.33847/2686-8296.3.2_1.

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The world currently is going through a serious pandemic due to the coronavirus disease (COVID-19). In this study, we investigate the gene structure similarity of coronavirus genomes isolated from COVID-19 patients, Severe Acute Respiratory Syndrome (SARS) patients and bats genes. We also explore the extent of similarity between their genome structures to find if the new coronavirus is similar to either of the other genome structures. Our experimental results show that there is 82.42% similarity between the CoV-2 genome structure and the bat genome structure. Moreover, we have used a bidirectio
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Nicolas Calderon, Kevin, Johan Fabian Galindo, and Clara Isabel Bermudez-Santana. "Evaluation of Conserved RNA Secondary Structures within and between Geographic Lineages of Zika Virus." Life 11, no. 4 (2021): 344. http://dx.doi.org/10.3390/life11040344.

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Zika virus (ZIKV), without a vaccine or an effective treatment approved to date, has globally spread in the last century. The infection caused by ZIKV in humans has changed progressively from mild to subclinical in recent years, causing epidemics with greater infectivity, tropism towards new tissues and other related symptoms as a product of various emergent ZIKV–host cell interactions. However, it is still unknown why or how the RNA genome structure impacts those interactions in differential evolutionary origin strains. Moreover, the genomic comparison of ZIKV strains from the sequence-based
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Zhang, Hui, Yao Xiong, Wenhai Xiao, and Yi Wu. "Investigation of Genome Biology by Synthetic Genome Engineering." Bioengineering 10, no. 2 (2023): 271. http://dx.doi.org/10.3390/bioengineering10020271.

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Synthetic genomes were designed based on an understanding of natural genomic information, offering an opportunity to engineer and investigate biological systems on a genome-wide scale. Currently, the designer version of the M. mycoides genome and the E. coli genome, as well as most of the S. cerevisiae genome, have been synthesized, and through the cycles of design–build–test and the following engineering of synthetic genomes, many fundamental questions of genome biology have been investigated. In this review, we summarize the use of synthetic genome engineering to explore the structure and fu
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Zhou, Tianming, Ruochi Zhang, and Jian Ma. "The 3D Genome Structure of Single Cells." Annual Review of Biomedical Data Science 4, no. 1 (2021): 21–41. http://dx.doi.org/10.1146/annurev-biodatasci-020121-084709.

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The spatial organization of the genome in the cell nucleus is pivotal to cell function. However, how the 3D genome organization and its dynamics influence cellular phenotypes remains poorly understood. The very recent development of single-cell technologies for probing the 3D genome, especially single-cell Hi-C (scHi-C), has ushered in a new era of unveiling cell-to-cell variability of 3D genome features at an unprecedented resolution. Here, we review recent developments in computational approaches to the analysis of scHi-C, including data processing, dimensionality reduction, imputation for e
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Fujishiro, Shin, Naoko Tokuda, and Masaki Sasai. "2P267 Computational chromosome conformation sampling of human diploid genome(21B. Genome biology:Genome structure,Poster)." Seibutsu Butsuri 54, supplement1-2 (2014): S239. http://dx.doi.org/10.2142/biophys.54.s239_3.

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Dissertations / Theses on the topic "Genome structure"

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Weintraub, Abraham S. (Abraham Selby). "Transcriptional regulation and genome structure." Thesis, Massachusetts Institute of Technology, 2018. http://hdl.handle.net/1721.1/117886.

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Thesis: Ph. D., Massachusetts Institute of Technology, Department of Biology, 2018.<br>Cataloged from PDF version of thesis. Page 162 blink.<br>Includes bibliographical references.<br>The regulation of gene expression is fundamental to the control of cell identity, development and disease. The control of gene transcription is a major point in the regulation of gene expression. Transcription is regulated by the binding of transcription factors to DNA regulatory elements known as enhancers and promoters. This leads to the formation of a DNA loop connecting the enhancer and the promoter resulting
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Trussart, Marie 1985. "Structure determination of mycoplasma pneumoniae genome." Doctoral thesis, Universitat Pompeu Fabra, 2015. http://hdl.handle.net/10803/552940.

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Des de l’aparició de les tecnologies de seqüenciació d’alt rendiment, els conjunts de dades biològiques han esdevingut cada cop més grans i complexes, la qual cosa els fa pràcticament impossibles d’interpretar manualment. El paradigma de l’aprenentatge automàtic permet fer una anàlisi sistemàtica de les relacions i patrons existents en els conjuts de dades, tot aprofitant l’enorme volum de dades disponibles. No obstant això, una aplicació poc curosa dels principis bàsics de l’aprenentatge automàtic pot conduir a estimacions massa optimistes, un problema prevalent conegut com a sobreajust. En
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Axelsson, Tomas. "Evolution of polyploid Brassica genomes : genome structure and the evolution of duplicated genes /." Uppsala : Swedish Univ. of Agricultural Sciences (Sveriges lantbruksuniv.), 2000. http://epsilon.slu.se/avh/2000/91-576-5768-8.pdf.

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Windsor, Aaron J. "Transposons in Arabidopsis : structure, activity, genome restructuring." Thesis, McGill University, 2001. http://digitool.Library.McGill.CA:80/R/?func=dbin-jump-full&object_id=38542.

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In the following study, I have investigated aberrant integration events of the maize Activator/Dissociation ( Ac/Ds) family of transposable elements (TEs) in Arabidopsis. The purpose of the study was twofold: (i) to identify sequence modifications associated with aberrant transposition that are informative regarding the mechanism of Ac/Ds transposition; and (ii) to extend our understanding of the mechanisms by which class II TEs can influence genome structure. This work focuses on a large inversion identified on chromosome II. A lone Ds element comprises one breakpoint of the inversion and the
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Wu, Huan-Lin. "Studies of protein structure and genome evolution." Thesis, University of Bath, 2006. https://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.432372.

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Majumdar, Rajrupa Sonali. "The conservation of genome structure in Salmonella typhi." Thesis, National Library of Canada = Bibliothèque nationale du Canada, 1999. http://www.collectionscanada.ca/obj/s4/f2/dsk2/ftp01/MQ48365.pdf.

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Weber, Claudia. "Genome structure and determinants of rates of evolution." Thesis, University of Bath, 2011. https://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.557810.

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How might the process of meiotic crossing-over affect the evolution of sequences and genome structure? Much attention has been focussed on the notion that crossing-over modulates the efficacy of selection. Here, we consider how good the evidence for this is. Correlations between recombination and protein rates of evolution, commonly interpreted in the above framework, might be misleading for failing to remove the effects of covariates or misinterpreted by disregarding direct effects of recombination, such as biased gene conversion. Similarly, higher diversity commonly seen in highly recombinin
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Yamato, Katsuyuki. "Structure and Gene Expression of Rice Mitochondrial Genome." Kyoto University, 1993. http://hdl.handle.net/2433/78042.

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Kyoto University (京都大学)<br>0048<br>新制・課程博士<br>博士(農学)<br>甲第5431号<br>農博第762号<br>新制||農||649(附属図書館)<br>学位論文||H5||N2565(農学部図書室)<br>UT51-93-F188<br>京都大学大学院農学研究科農芸化学専攻<br>(主査)教授 大山 莞爾, 教授 山田 康之, 教授 常脇 恒一郎<br>学位規則第4条第1項該当
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MERONI, ALICE. "RNA IN DNA: FROM STRUCTURE TO GENOME INSTABILITY." Doctoral thesis, Università degli Studi di Milano, 2018. http://hdl.handle.net/2434/570097.

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The presence of RNA in the genome of living cells is one of the emerging topics of the last two decades and has been implicated in many biological processes. I focused my attention on ribonucleotides (rNMPs) embedded into DNA during genome duplication, as a threat to its integrity. In fact, rNMPs have been classified as the most frequent non-canonical nucleotides introduced during genome duplication by DNA polymerases. Such high incorporation frequency has been related to a physiological role in mismatch repair, but it can be easily turned into a source of genomic instability if rNMPs are not
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Neuditschko, Markus. "A whole-genome population structure analysis within cattle breeds." Diss., lmu, 2011. http://nbn-resolving.de/urn:nbn:de:bvb:19-133991.

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Books on the topic "Genome structure"

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Nicolini, Claudio, ed. Genome Structure and Function. Springer Netherlands, 1997. http://dx.doi.org/10.1007/978-94-011-5550-2.

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Giorgio, Bernardi, ed. Genome structure and evolution. Springer, 1991.

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de, Bruijn F. J., Lupski James R. 1957-, and Weinstock George M. 1949-, eds. Bacterial genomes: Physical structure and analysis. Kluwer Academic, 1999.

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de, Bruijn F. J., Lupski James R. 1957-, and Weinstock George M. 1949-, eds. Bacterial genomes: Physical structure and analysis. Chapman & Hall, 1998.

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Kolchanov, Nikolay, and Ralf Hofestaedt, eds. Bioinformatics of Genome Regulation and Structure. Springer US, 2004. http://dx.doi.org/10.1007/978-1-4419-7152-4.

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O'Sullivan, Donal Martin. Genome structure & plasticity in Colletotrichum lindemuthianum. University College Dublin, 1997.

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A, Kolchanov N., and Hofestädt Ralf, eds. Bioinformatics of genome regulation and structure. Kluwer Academic, 2004.

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Haddad, Luciana Amaral, ed. Human Genome Structure, Function and Clinical Considerations. Springer International Publishing, 2021. http://dx.doi.org/10.1007/978-3-030-73151-9.

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Kolchanov, Nikolay, Ralf Hofestaedt, and Luciano Milanesi, eds. Bioinformatics of Genome Regulation and Structure II. Springer US, 2006. http://dx.doi.org/10.1007/0-387-29455-4.

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Evans, D. E. Plant nuclear structure, genome architecture and gene regulation. Wiley-Blackwell, 2013.

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Book chapters on the topic "Genome structure"

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Black, Lindsay W., and Julie A. Thomas. "Condensed Genome Structure." In Viral Molecular Machines. Springer US, 2011. http://dx.doi.org/10.1007/978-1-4614-0980-9_21.

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Symons, Robert H. "Viral Genome Structure." In The Plant Viruses. Springer US, 1985. http://dx.doi.org/10.1007/978-1-4684-4937-2_3.

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Watson, J. D., J. M. Thornton, M. L. Tress, et al. "Structure to function." In Modern Genome Annotation. Springer Vienna, 2008. http://dx.doi.org/10.1007/978-3-211-75123-7_12.

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Feldman, Moshe, and Avraham A. Levy. "Genome Structure of Triticeae Species." In Wheat Evolution and Domestication. Springer International Publishing, 2023. http://dx.doi.org/10.1007/978-3-031-30175-9_3.

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AbstractThis chapter describes characteristic features of the chromosomes and genomes of Triticeae species. Centromeres contain typical CENH3 nucleosomes, but these are associated with repeats that are larger than in other plant species. The sub-telomeric ends are rich in transposable elements and contain diverse repeats and recombination hotspots. The nucleolar organizer regions contain hundreds or thousands of ribosomal genes, rDNA repeats, arranged in tandem arrays that form a constriction known as the nucleolar organizer (NOR). We describe their mapping as well as the phenomenon known as N
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Palacios, Rafael, and Manuel Megías. "Genome Structure of Diazotrophs." In Nitrogen Fixation: From Molecules to Crop Productivity. Springer Netherlands, 2000. http://dx.doi.org/10.1007/0-306-47615-0_144.

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Kellogg, Elizabeth A. "Karyology and Genome Structure." In Flowering Plants. Monocots. Springer International Publishing, 2015. http://dx.doi.org/10.1007/978-3-319-15332-2_5.

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Dolan, James, and Jonathan Leis. "Integrase: Structure, Function, and Mechanism." In Viral Genome Replication. Springer US, 2009. http://dx.doi.org/10.1007/b135974_21.

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Tramontano, A., D. Jones, L. Rychlewski, et al. "Structure prediction of globular proteins." In Modern Genome Annotation. Springer Vienna, 2008. http://dx.doi.org/10.1007/978-3-211-75123-7_14.

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Kim, Nam-Hoon, Murukarthick Jayakodi, and Tae-Jin Yang. "Ginseng Genome Structure and Evolution." In The Ginseng Genome. Springer International Publishing, 2021. http://dx.doi.org/10.1007/978-3-030-30347-1_7.

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Belmont, A. S. "Large-Scale Chromatin Structure." In Genome Structure and Function. Springer Netherlands, 1997. http://dx.doi.org/10.1007/978-94-011-5550-2_13.

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Conference papers on the topic "Genome structure"

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Yu, Wenbin. "Structure Genome: Fill the Gap between Materials Genome and Structural Analysis." In 56th AIAA/ASCE/AHS/ASC Structures, Structural Dynamics, and Materials Conference. American Institute of Aeronautics and Astronautics, 2015. http://dx.doi.org/10.2514/6.2015-0201.

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ZHANG, QI, WEI WANG, LEONARD MCMILLAN, FERNANDO PARDO-MANUEL DE VILLENA, and DAVID THREADGILL. "INFERRING GENOME-WIDE MOSAIC STRUCTURE." In Proceedings of the Pacific Symposium. WORLD SCIENTIFIC, 2008. http://dx.doi.org/10.1142/9789812836939_0015.

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"Whole genome sequencing and assembly of Saccharomyces cerevisiae genomes using Oxford Nanopore data." In Bioinformatics of Genome Regulation and Structure/ Systems Biology. institute of cytology and genetics siberian branch of the russian academy of science, Novosibirsk State University, 2020. http://dx.doi.org/10.18699/bgrs/sb-2020-037.

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ZHAO, BANGHUA, and WENBIN YU. "Multiscale Structural Analysis of Honeycomb Sandwich Structure Using Mechanics of Structure Genome." In American Society for Composites 2017. DEStech Publications, Inc., 2017. http://dx.doi.org/10.12783/asc2017/15171.

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Peignier, Sergio, Christophe Rigotti, and Guillaume Beslon. "Subspace Clustering Using Evolvable Genome Structure." In GECCO '15: Genetic and Evolutionary Computation Conference. ACM, 2015. http://dx.doi.org/10.1145/2739480.2754709.

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"Genome mining for novel bioactive peptides." In Bioinformatics of Genome Regulation and Structure/ Systems Biology. institute of cytology and genetics siberian branch of the russian academy of science, Novosibirsk State University, 2020. http://dx.doi.org/10.18699/bgrs/sb-2020-330.

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"Genome and karyotype evolution after whole genome duplication in free-living flatworms of the genus Macrostomum." In Bioinformatics of Genome Regulation and Structure/ Systems Biology. institute of cytology and genetics siberian branch of the russian academy of science, Novosibirsk State University, 2020. http://dx.doi.org/10.18699/bgrs/sb-2020-167.

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Liu, Ning, and Wenbin Yu. "Buckling Analysis of Stiffened Panels Using Mechanics of Structure Genome." In 58th AIAA/ASCE/AHS/ASC Structures, Structural Dynamics, and Materials Conference. American Institute of Aeronautics and Astronautics, 2017. http://dx.doi.org/10.2514/6.2017-1137.

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"Plastid genome evolution in the genus Allium." In Bioinformatics of Genome Regulation and Structure/ Systems Biology. institute of cytology and genetics siberian branch of the russian academy of science, Novosibirsk State University, 2020. http://dx.doi.org/10.18699/bgrs/sb-2020-154.

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Trieu, Tuan, and Jianlin Cheng. "3D Genome Structure Modeling by Lorentzian Objective Function." In BCB '17: 8th ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics. ACM, 2017. http://dx.doi.org/10.1145/3107411.3107455.

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Reports on the topic "Genome structure"

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Padmanabhan, Radha K. Structure and Functional Studies on Dengue-2 Virus Genome. Defense Technical Information Center, 1986. http://dx.doi.org/10.21236/ada199075.

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Peng, Jamy C. Local chromatin structure of heterochromatin regulates repeated DNA stability, nucleolus structure, and genome integrity. Office of Scientific and Technical Information (OSTI), 2007. http://dx.doi.org/10.2172/913167.

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Gur, Amit, Edward Buckler, Joseph Burger, Yaakov Tadmor, and Iftach Klapp. Characterization of genetic variation and yield heterosis in Cucumis melo. United States Department of Agriculture, 2016. http://dx.doi.org/10.32747/2016.7600047.bard.

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Project objectives: 1) Characterization of variation for yield heterosis in melon using Half-Diallele (HDA) design. 2) Development and implementation of image-based yield phenotyping in melon. 3) Characterization of genetic, epigenetic and transcriptional variation across 25 founder lines and selected hybrids. The epigentic part of this objective was modified during the course of the project: instead of characterization of chromatin structure in a single melon line through genome-wide mapping of nucleosomes using MNase-seq approach, we took advantage of rapid advancements in single-molecule se
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Dawson, William O., Moshe Bar-Joseph, Charles L. Niblett, Ron Gafny, Richard F. Lee, and Munir Mawassi. Citrus Tristeza Virus: Molecular Approaches to Cross Protection. United States Department of Agriculture, 1994. http://dx.doi.org/10.32747/1994.7570551.bard.

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Citrus tristeza virus (CTV) has the largest genomes among RNA viruses of plants. The 19,296-nt CTV genome codes for eleven open reading frames (ORFs) and can produce at least 19 protein products ranging in size from 6 to 401 kDa. The complex biology of CTV results in an unusual composition of CTV-specific RNAs in infected plants which includes multiple defective RNAs and mixed infections. The complex structure of CTV populations poses special problems for diagnosis, strain differentiation, and studies of pathogenesis. A manipulatable genetic system with the full-length cDNA copy of the CTV gen
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Hegyi, Hedi, and Mark Gerstein. The Relationship between Protein Structure and Function: a Comprehensive Survey with Application to the Yeast Genome. Defense Technical Information Center, 1999. http://dx.doi.org/10.21236/ada472211.

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Azem, Abdussalam, George Lorimer, and Adina Breiman. Molecular and in vivo Functions of the Chloroplast Chaperonins. United States Department of Agriculture, 2011. http://dx.doi.org/10.32747/2011.7697111.bard.

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We present here the final report for our research project entitled "The molecular and in vivo functions of the chloroplast chaperonins”. Over the past few decades, intensive investigation of the bacterial GroELS system has led to a basic understanding of how chaperonins refold denatured proteins. However, the parallel is limited in its relevance to plant chaperonins, since the plant system differs from GroEL in genetic complexity, physiological roles of the chaperonins and precise molecular structure. Due to the importance of plant chaperonins for chloroplast biogenesis and Rubisco assembly, r
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Breiman, Adina, Jan Dvorak, Abraham Korol, and Eduard Akhunov. Population Genomics and Association Mapping of Disease Resistance Genes in Israeli Populations of Wild Relatives of Wheat, Triticum dicoccoides and Aegilops speltoides. United States Department of Agriculture, 2011. http://dx.doi.org/10.32747/2011.7697121.bard.

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Wheat is the most widely grown crop on earth, together with rice it is second to maize in total global tonnage. One of the emerging threats to wheat is stripe (yellow) rust, especially in North Africa, West and Central Asia and North America. The most efficient way to control plant diseases is to introduce disease resistant genes. However, the pathogens can overcome rapidly the effectiveness of these genes when they are wildly used. Therefore, there is a constant need to find new resistance genes to replace the non-effective genes. The resistance gene pool in the cultivated wheat is depleted a
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Burns, Malcom, and Gavin Nixon. Literature review on analytical methods for the detection of precision bred products. Food Standards Agency, 2023. http://dx.doi.org/10.46756/sci.fsa.ney927.

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The Genetic Technology (Precision Breeding) Act (England) aims to develop a science-based process for the regulation and authorisation of precision bred organisms (PBOs). PBOs are created by genetic technologies but exhibit changes which could have occurred through traditional processes. This current review, commissioned by the Food Standards Agency (FSA), aims to clarify existing terminologies, explore viable methods for the detection, identification, and quantification of products of precision breeding techniques, address and identify potential solutions to the analytical challenges presente
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Tzfira, Tzvi, Michael Elbaum, and Sharon Wolf. DNA transfer by Agrobacterium: a cooperative interaction of ssDNA, virulence proteins, and plant host factors. United States Department of Agriculture, 2005. http://dx.doi.org/10.32747/2005.7695881.bard.

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Abstract:
Agrobacteriumtumefaciensmediates genetic transformation of plants. The possibility of exchanging the natural genes for other DNA has led to Agrobacterium’s emergence as the primary vector for genetic modification of plants. The similarity among eukaryotic mechanisms of nuclear import also suggests use of its active elements as media for non-viral genetic therapy in animals. These considerations motivate the present study of the process that carries DNA of bacterial origin into the host nucleus. The infective pathway of Agrobacterium involves excision of a single-stranded DNA molecule (T-strand
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10

Grumet, R., J. Burger, Y. Tadmor, et al. Cucumis fruit surface biology: Genetic analysis of fruit exocarp features in melon (C. melo) and cucumber (C. sativus). United States-Israel Binational Agricultural Research and Development Fund, 2020. http://dx.doi.org/10.32747/2020.8134155.bard.

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The fruit surface (exocarp) is a unique tissue with multiple roles influencing fruit growth and development, disease susceptibility, crop yield, post-harvest treatments, shipping and storage quality, and food safety. Furthermore, highly visible exocarp traits are the consumer's first exposure to the fruit, serving to identify fruit type, variety, attractiveness, and market value. Cucurbit fruit, including the closely related Cucumis species, melon (C. melo) and cucumber (C. sativus), exhibit tremendous diversity for fruit surface properties that are not present in model species. In this projec
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