Relevant bibliographies by topics / Ruminococcus

Contents

  1. Journal articles
  2. Dissertations / Theses
  3. Book chapters
  4. Conference papers
  5. Reports

Academic literature on the topic 'Ruminococcus'

Author: Grafiati
Published: 23 November 2024
Last updated: 31 July 2025

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Journal articles on the topic "Ruminococcus"

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Chan, W. W., and B. A. Dehority. "Production of Ruminococcus flavefaciens growth inhibitor(s) by Ruminococcus albus." Animal Feed Science and Technology 77, no. 1-2 (1999): 61–71. http://dx.doi.org/10.1016/s0377-8401(98)00234-x.

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Klieve, Athol V., Melvin T. Yokoyama, Robert J. Forster, Diane Ouwerkerk, Peter A. Bain, and Erin L. Mawhinney. "Naturally Occurring DNA Transfer System Associated with Membrane Vesicles in Cellulolytic Ruminococcus spp. of Ruminal Origin." Applied and Environmental Microbiology 71, no. 8 (2005): 4248–53. http://dx.doi.org/10.1128/aem.71.8.4248-4253.2005.

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ABSTRACT A genetic transformation system with similarities to those reported for gram-negative bacteria was found to be associated with membrane vesicles of the ruminal cellulolytic genus Ruminococcus. Double-stranded DNA was recovered from the subcellular particulate fraction of all the cellulolytic ruminococci examined. Electron microscopy revealed that the only particles present resembled membrane vesicles. The likelihood that the DNA was associated with membrane vesicles (also known to contain cellulosomes) was further supported by the adherence of the particles associated with the subcell
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Livaoğlu, Murat, Gürdal Yilmaz, Servet Kerimoğlu, Kemalettin Aydin, and Naci Karacal. "Necrotizing fasciitis with ruminococcus." Journal of Medical Microbiology 57, no. 2 (2008): 246–48. http://dx.doi.org/10.1099/jmm.0.47453-0.

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Necrotizing fasciitis is a life- and limb-threatening soft tissue infection. Due to its underlying predisposition and rapid progression, treatment should be started quickly using antibiotherapy and surgical intervention. Although necrotizing fasciitis is mainly caused by streptococci and staphylococci, it may also be polymicrobial. Other peptostreptococci have been reported as necrotizing fasciitis agents in the literature, though we encountered no cases of necrotizing fasciitis caused by Ruminococcus productus. Here, we describe a case of necrotizing fasciitis caused by R. productus, a Gram-p
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Marcille, F., A. Gomez, P. Joubert, et al. "Distribution of Genes Encoding the Trypsin-Dependent Lantibiotic Ruminococcin A among Bacteria Isolated from Human Fecal Microbiota." Applied and Environmental Microbiology 68, no. 7 (2002): 3424–31. http://dx.doi.org/10.1128/aem.68.7.3424-3431.2002.

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ABSTRACT Fourteen bacterial strains capable of producing a trypsin-dependent antimicrobial substance active against Clostridium perfringens were isolated from human fecal samples of various origins (from healthy adults and children, as well as from adults with chronic pouchitis). Identification of these strains showed that they belonged to Ruminococcus gnavus, Clostridium nexile, and Ruminococcus hansenii species or to new operational taxonomic units, all from the Clostridium coccoides phylogenetic group. In hybridization experiments with a probe specific for the structural gene encoding the t
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Ni, Yen-Hsuan, and Huey-Huey Chua. "198: GUT RUMINOCOCCUS BROMII ALLEVIATED RUMINOCOCCUS GNAVUSINDUCED ALLERGIC DYSBIOSIS VIA MODULATING SEROTONIN HOMEOSTASIS." Gastroenterology 169, no. 1 (2025): S—56. https://doi.org/10.1016/s0016-5085(25)01084-4.

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WILLEMS, A., and M. D. COLLINS. "NOTES: Phylogenetic Analysis of Ruminococcus flavefaciens, the Type Species of the Genus Ruminococcus, Does Not Support the Reclassification of Streptococcus hansenii and Peptostreptococcus productus as Ruminococci." International Journal of Systematic Bacteriology 45, no. 3 (1995): 572–75. http://dx.doi.org/10.1099/00207713-45-3-572.

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Champion, Kathleen M., Carla T. Helaszek, and Bryan A. White. "Analysis of antibiotic susceptibility and extrachromosomal DNA content of Ruminococcus albus and Ruminococcus flavefaciens." Canadian Journal of Microbiology 34, no. 10 (1988): 1109–15. http://dx.doi.org/10.1139/m88-196.

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Seventeen Ruminococcus albus and Ruminococcus flavefaciens strains have been screened for naturally occurring antibiotic resistance, as determined by zones of inhibition from antibiotic disks. These strains were also examined for extrachromosomal DNA content. All strains screened are resistant to low levels (10–200 μg/mL) of streptomycin. In contrast to the previously reported data, we have found that R. flavefaciens C-94 is now susceptible to both kanamycin and tetracycline. However, R. flavefaciens FD-1 is not susceptible to kanamycin (minimum inhibitory concentration (MIC) = 40 μg/mL). Furt
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Dabard, J., C. Bridonneau, C. Phillipe, et al. "Ruminococcin A, a New Lantibiotic Produced by aRuminococcus gnavus Strain Isolated from Human Feces." Applied and Environmental Microbiology 67, no. 9 (2001): 4111–18. http://dx.doi.org/10.1128/aem.67.9.4111-4118.2001.

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ABSTRACT When cultivated in the presence of trypsin, the Ruminococcus gnavus E1 strain, isolated from a human fecal sample, was able to produce an antibacterial substance that accumulated in the supernatant. This substance, called ruminococcin A, was purified to homogeneity by reverse-phase chromatography. It was shown to be a 2,675-Da bacteriocin harboring a lanthionine structure. The utilization of Edman degradation and tandem mass spectrometry techniques, followed by DNA sequencing of part of the structural gene, allowed the identification of 21 amino acid residues. Similarity to other bact
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Anam, Moh Sofi’ul, Andriyani Astuti, Budi Prasetyo Widyobroto, Gunawan ., and Ali Agus. "Effects of Combined Organic Selenium and Zinc Supplementation on In Vitro Ruminal Enzyme Activities and Relative Populations of Several Bacterial Species." World's Veterinary Journal 14, no. 2 (2024): 178–83. http://dx.doi.org/10.54203/scil.2024.wvj22.

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Selenium (Se) and zinc (Zn) are essential animal microminerals. Combining Se and Zn (Se-Zn) as a feed additive in its influence on rumen fermentation patterns is still very limited, so further investigation is needed. The present study explored the supplementation impact of combined Se-Zn from organic sources on rumen enzyme activity and relative abundance of several bacterial species through an in vitro method. Five treatments, each with six replicates were used in the study. The first group treated without Se and Zn supplementation (T0, control), the second group treated with 0.3 ppm Se + 60
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Chassard,, Christophe, Eve Delmas,, Céline Robert,, Paul A. Lawson, and Annick Bernalier-Donadille. "Ruminococcus champanellensis sp. nov., a cellulose-degrading bacterium from human gut microbiota." International Journal of Systematic and Evolutionary Microbiology 62, no. 1 (2012): 138–43. http://dx.doi.org/10.1099/ijs.0.027375-0.

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A strictly anaerobic, cellulolytic strain, designated 18P13T, was isolated from a human faecal sample. Cells were Gram-positive non-motile cocci. Strain 18P13T was able to degrade microcrystalline cellulose but the utilization of soluble sugars was restricted to cellobiose. Acetate and succinate were the major end products of cellulose and cellobiose fermentation. 16S rRNA gene sequence analysis revealed that the isolate belonged to the genus Ruminococcus of the family Ruminococcaceae. The closest phylogenetic relative was the ruminal cellulolytic strain Ruminococcus flavefaciens ATCC 19208T (
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Dissertations / Theses on the topic "Ruminococcus"

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Zhang, Jun Xian. "Genetic determination of xylanases in rumen bacterium ruminococcus flavefaciens." Thesis, University of Aberdeen, 1992. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.317940.

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The xylanases and xylanase genes in the rumen cellulolytic bacterium <i>Ruminococcus flavefaciens</i> were studied in this thesis. Based on the experiments carried out in this thesis, the following conclusions can be drawn: At least seven multiple xylanases are revealed in <i>R.flavefaciens</i> strain 17 and strain 007, and nine in strain FD-1 by the method used here for activity detection in gels. A im54 kDa constitutive xylanase appears in both strains 17 and 007, but not in FD-1. Straw and xylan are the best substrates for production of most xylanases in <i>R.flavefaciens</i>. Sequencing on
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Beaufrère, Marie. "Rôle de la dysbiose du microbiote intestinal et réponse Th17 dans les spondyloarthrites : pathogénie et causalité." Electronic Thesis or Diss., université Paris-Saclay, 2024. http://www.theses.fr/2024UPASL046.

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Les spondyloarthrites (SpA) sont desrhumatismes inflammatoires chroniques fortementassociés à l'allèle HLA-B27 du complexe majeurd'histocompatibilité de classe I. La preuve du rôlepathogène du HLA-B27 a été apportée par plusieurslignées de rats transgéniques pour le HLA-B27 et lab2 microglobuline humaine (rats B27). Ces rats B27développent spontanément des manifestationscomparables à la SpA humaine. Dans ce modèle, lescellules hématopoïétiques HLA-B27+, leslymphocytes T CD4+ et un microbiote conventionnelsont nécessaires pour développer la maladie. Le rôledu microbiote a également été étayé pa
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Reveneau, Carine. "Biochemical and Genome-Based Analysis of Polysaccharide Degradation by Ruminococcus Albus." The Ohio State University, 2002. http://rave.ohiolink.edu/etdc/view?acc_num=osu1419948721.

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Andrade, Gabriel Belem de. "Estudos estruturais de dockerinas e cohesinas em Ruminococcus flavefaciens e sua aplicação no desenvolvimento de matrizes auto montáveis de proteínas." Universidade de São Paulo, 2017. http://www.teses.usp.br/teses/disponiveis/76/76132/tde-14092017-105719/.

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O celulossomo é um complexo multienzimático extracelular utilizado por bactérias anaeróbias para a degradação de biomassa vegetal. Ele é composto por escafoldinas, estruturas alongadas que abrigam diversos módulos cohesina, às quais se ligam dockerinas, seus parceiros de interação específica de alta afinidade, fusionados às enzimas celulolíticas. Os módulos cohesina e dockerina compõem o elemento central da interação entre todos os componentes que integram o celulossomo. Esses módulos são divididos em tipos, de acordo com sua sequência primária. Essa divisão reflete efeitos funcionais distinto
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Cervera-Tison, Marine. "Investigating the structure, function and regulation of Ruminococcus gnavus E1 alpha-galactosidases." Thesis, University of East Anglia, 2011. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.578253.

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Here we report the enzymatic characteristics and regulation of expression for two GH36 a- galactosidases. Agu 1 and Aga,'. li'0111 R. gnavus El. Bioinforrnatics analysis of their respective genetic environment showed a different organisation. Aga 1 having a simple organisation while Aga2 is organised as part nf an ()p~wn. They were heterologously expressed in Escherichia coli. puri tied to homogeneity and their biochemical properties and substrate preferences comparatively analysed. The growth pattern (If the strain in minimum media demonstrates a preference tor complex substratcs (melibiose a
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Torres, Marco Tulio Rincon. "Cellulosome organisation of plant cell wall degrading enzymes in Ruminococcus flavefaciens 17." Thesis, University of Aberdeen, 2000. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.327013.

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Alatou, Radia. "Caractérisation d'une adhésine de la famille des MSCRAMMs chez ruminococcus gnavus E1." Aix-Marseille 3, 2010. http://www.theses.fr/2010AIX30014.

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Ruminococcus gnavus E1, une bactérie à Gram positif, anaérobie stricte, isolée du microbiote dominant d'un homme sain. Un ORF d'environ 6kb, nommé radA, a été identifié sur le chromosome de la souche E1, à proximité des clusters génétiques impliqués dans la biosynthèse des bactériocines RumA et RumC qui sont actives contre le pathogène Closthdium perfringens. RadA présente de fortes homologies avec des gènes de Staphylococcus aureus, Bacillus cereus et C. Perfingens codant pour des protéines des adhésines de la famille des MSCRAMMs. La partie du gène radA codant pour les 414 acides aminés situ
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Cervera, Tison Marine. "Investigating the structure, function and regulation of Ruminococcus gnavus E1 [alpha]-galactosidases." Thesis, Aix-Marseille 3, 2011. http://www.theses.fr/2011AIX30050.

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Ruminococcus gnavus E1 appartient au groupe des Firmicutes, l’un des deux groupes dominants du microbiote intestinal humain. Les a-galactosidases sont des glycosides hydrolase (GH) actives sur des substrats contenant des galactoses liés en a. Elles sont très largement distribuées dans tous les domaines du vivant, bactéries, champignons, plantes et animaux, mais sont absentes du tractus digestif humain. Ces travaux portent sur les caractéristiques enzymatiques et la régulation de l’expression de deux &#61537;-galactosidase, Aga1 et Aga2, de R. gnavus E1. L’analyse bioinformatique de leur enviro
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Kirby, James. "Multiplicity and organisation of plant cell wall degrading enzymes in Ruminococcus flavefaciens 17." Thesis, University of Aberdeen, 1996. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.362230.

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The Gram-positive, strictly anaerobic bacterium, <I>R. flavefaciens</I>, plays an important role in the degradation of plant cell wall polysaccharides in the rumen. There is a paucity of information available, however, regarding the multiplicity and organisation of <I>R. flavefaciens </I>cellulolytic and xylanolytic enzyme systems. A technique involving PCR amplification of DNA with primers designed from conserved sequences, followed by hybridisation of the PCR products to chromosomal DNA, has led to an estimate of xylanase gene multiplicity in <I>R. flavefaciens</I>. The xylanase-specific pri
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Wang, Wenyen. "Molecular analysis of two cellulase genes from Ruminococcus flavefaciens FD-1 and their transcriptional regulation." Doctoral thesis, University of Cape Town, 1993. http://hdl.handle.net/11427/23584.

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The mesophilic Ruminococcus flavefaciens FD-1 (NCDO 2215) is a Gram-positive obligate anaerobic bacterium. The aim of this thesis was to clone, sequence and analyze a cellodextrinase gene (celA) and a carboxymethylcellulase gene (celE), and study their regulation and induction at the transcriptional level. The sequence of the celA gene from FD-1 was determined and the amino acid sequence of the CelA enzyme (336 amino acid residues) deduced. It showed 40% identity with endoglucanase C of Clostridium thermocellum and 27.4% identity with endoglucanase 3 of Fibrobacter succinogenes. These three en
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Book chapters on the topic "Ruminococcus"

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Cocconcelli, Pier Sandro. "Electroporation of the Anaerobic Rumen Bacteria Ruminococcus albus." In Electrotransformation of Bacteria. Springer Berlin Heidelberg, 2000. http://dx.doi.org/10.1007/978-3-662-04305-9_24.

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Anwar, Khairil, Sukarne, Lalu Unsunnidhal, et al. "Cloning and Expression of Ruminococcus flavefaciens Cellulase-encoding Gene in E. coli as Feed Additive for Poultry." In Advances in Biological Sciences Research. Atlantis Press International BV, 2025. https://doi.org/10.2991/978-94-6463-670-3_33.

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Wood, Thomas M. "Cellulase of Ruminococcus albus." In Methods in Enzymology. Elsevier, 1988. http://dx.doi.org/10.1016/0076-6879(88)60123-6.

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Ohmiya, Kunio, and Shoichi Shimizu. "Cellobiosidase from Ruminococcus albus." In Methods in Enzymology. Elsevier, 1988. http://dx.doi.org/10.1016/0076-6879(88)60144-3.

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Ohmiya, Kunio, and Shoichi Shimizu. "β-Glucosidase from Ruminococcus albus." In Methods in Enzymology. Elsevier, 1988. http://dx.doi.org/10.1016/0076-6879(88)60147-9.

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Ohmiya, K., T. Kajino, E. Goto, and S. Shimizu. "NUCLEOTIDE SEQUENCE OF THE CELLULASE GENE FROM RUMINOCOCCUS ALBUS AND PROPERTIES OF ITS TRANSLATION PRODUCT." In Biotechnology in Pulp and Paper Manufacture. Elsevier, 1990. http://dx.doi.org/10.1016/b978-0-409-90192-4.50061-3.

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Georgescu, Doina, Ana Lascu, Ioana Ionita, et al. "Nonalcoholic Fatty Liver Disease, Procalcitonin, and Gut Microbiota: Players in the Same Team." In Advances in Probiotics for Health and Nutrition [Working Title]. IntechOpen, 2023. http://dx.doi.org/10.5772/intechopen.110134.

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The study aimed to assess the link between procalcitonin (PCT) and gut dysbiosis in patients with nonalcoholic fatty liver disease (NAFLD). A total of 125 research participants, 100 patients with NAFLD (59% women and 41% men) age between 43 and 84 years and 25 healthy controls, joined this observational study. Patients were consecutively enrolled into two groups: 50 with gut dysbiosis and 50 without gut dysbiosis, after several conditions have been ruled out. Patients from dysbiotic group displayed significantly lesser use of biguanides and statins and elevation of fatty liver index (FLI), PCT
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Ning, Jing, Shu-Yi Huang, Shi-Dong Chen, Ya-Ru Zhang, Yu-Yuan Huang, and Jin-Tai Yu. "Investigating Casual Associations Among Gut Microbiota, Metabolites, and Neurodegenerative Diseases: A Mendelian Randomization Study." In Advances in Alzheimer’s Disease. IOS Press, 2022. http://dx.doi.org/10.3233/aiad220023.

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Background: Recent studies had explored that gut microbiota was associated with neurodegenerative diseases (including Alzheimer’s disease (AD), Parkinson’s disease (PD), and amyotrophic lateral sclerosis (ALS)) through the gut-brain axis, among which metabolic pathways played an important role. However, the underlying causality remained unclear. Objective: Our study aimed to evaluate potential causal relationships between gut microbiota, metabolites, and neurodegenerative diseases through Mendelian randomization (MR) approach. Methods: We selected genetic variants associated with gut microbiot
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Conference papers on the topic "Ruminococcus"

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Baumgartner, M., M. Lang, P. Pjevac та ін. "RUMINOCOCCUS GNAVUS 3β-HSDH LINKS MUCOSAL BIOFILMS AND BILE ACID MALABSORPTION". У 55. Jahrestagung & 32. Fortbildungskurs der Österreichischen Gesellschaft für Gastroenterologie & Hepatologie–ÖGGH (Hybrid Veranstaltung). Georg Thieme Verlag, 2022. http://dx.doi.org/10.1055/s-0042-1755750.

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Azzouz, Doua F., Ze Chen, Peter Izmirly, et al. "511 Disease flares in lupus are concordant with Ruminococcus Blautia Gnavus blooms arising within unstable gut microbiota communities." In LUPUS 21ST CENTURY 2021 CONFERENCE, Abstracts of the Fifth Biannual Scientific Meeting of the North and South American and Caribbean Lupus Community, Tucson, Arizona, USA – September 22–25, 2021. Lupus Foundation of America, 2021. http://dx.doi.org/10.1136/lupus-2021-lupus21century.29.

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Azad, R., and S. Mary. "Tentative function and structure prediction of putative genes in the whole genome of gut bacteria ruminococcus champanellensis DSM18848 for the better elucidation of cellular metabolism." In CONTEMPORARY INNOVATIONS IN ENGINEERING AND MANAGEMENT. AIP Publishing, 2023. http://dx.doi.org/10.1063/5.0179097.

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Rayapanani, Azad, and Mary Sanitha. "Tentative function and structure prediction of putative genes in the whole genome of gut bacteria Ruminococcus albus 7 for the better elucidation of cellular metabolism." In ADVANCES IN SUSTAINABLE CONSTRUCTION MATERIALS. AIP Publishing, 2023. http://dx.doi.org/10.1063/5.0116469.

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Reports on the topic "Ruminococcus"

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Morrison, Mark, and Joshuah Miron. Molecular-Based Analysis of Cellulose Binding Proteins Involved with Adherence to Cellulose by Ruminococcus albus. United States Department of Agriculture, 2000. http://dx.doi.org/10.32747/2000.7695844.bard.

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At the beginning of this project, it was clear that R. albus adhered tightly to cellulose and its efficient degradation of this polysaccharide was dependent on micromolar concentrations of phenylacetic acid (PAA) and phenylpropionic acid (PPA). The objectives for our research were: i) to identify how many different kinds of cellulose binding proteins are produced by Ruminococcus albus; ii) to isolate and clone the genes encoding some of these proteins from the same bacterium; iii) to determine where these various proteins were located and; iv) quantify the relative importance of these proteins
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Morrison, Mark, Joshuah Miron, Edward A. Bayer, and Raphael Lamed. Molecular Analysis of Cellulosome Organization in Ruminococcus Albus and Fibrobacter Intestinalis for Optimization of Fiber Digestibility in Ruminants. United States Department of Agriculture, 2004. http://dx.doi.org/10.32747/2004.7586475.bard.

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Improving plant cell wall (fiber) degradation remains one of the highest priority research goals for all ruminant enterprises dependent on forages, hay, silage, or other fibrous byproducts as energy sources, because it governs the provision of energy-yielding nutrients to the host animal. Although the predominant species of microbes responsible for ruminal fiber degradation are culturable, the enzymology and genetics underpinning the process are poorly defined. In that context, there were two broad objectives for this proposal. The first objective was to identify the key cellulosomal component
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Chaparro, Martha Liliana, Erika Grijalba Bernal, Fernando Rodríguez Villamizar, and Martha Isabel Gómez Álvarez. Estabilidad de las cepas anaerobicas Butyrivibrio fibrisolvens (Bg) streptococcus bovis (C2), Ruminococcus flavefaciens (Rf) y Fibrobacter Succinogenes (Fs) Formuladas en el vehículo oleoso. Corporación Colombiana de Investigación Agropecuaria - AGROSAVIA, 2018. http://dx.doi.org/10.21930/agrosavia.poster.2018.9.

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En Colombia la morbilidad de terneros neonatos causada por la incidencia de diarreas puede alcanzar un 60%, con una morbilidad cercana a un 20% (Aldana et al., 2009).Para su tratamiento generalmente se emplean antibióticos que disminuye la calidad de la leche y aumentan la resistencia de los patógenoa a los agentes antimicrobiales (FAO, 2016). En AGROSAVIA, se seleccionó un coctel microbiano formado por bacterias aisladas de bovinos nativos, que consistió en cuatro bacterias ruminales anaerobicas que redujeron la incidencia de diarreas hasta un en 65% en terneros neonatos. Para estas bacterias
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