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Relevant bibliographies by topics / Protein titration

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Journal articles
Dissertations / Theses
Book chapters
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Academic literature on the topic 'Protein titration'

Author: Grafiati

Published: 3 June 2025

Last updated: 31 July 2025

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Journal articles on the topic "Protein titration"

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Chen, Po-chia, Pawel Masiewicz, Kathryn Perez, and Janosch Hennig. "Structure-based screening of binding affinities via small-angle X-ray scattering." IUCrJ 7, no. 4 (2020): 644–55. http://dx.doi.org/10.1107/s2052252520004169.

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Protein–protein and protein–ligand interactions often involve conformational changes or structural rearrangements that can be quantified by solution small-angle X-ray scattering (SAXS). These scattering intensity measurements reveal structural details of the bound complex, the number of species involved and, additionally, the strength of interactions if carried out as a titration. Although a core part of structural biology workflows, SAXS-based titrations are not commonly used in drug discovery contexts. This is because prior knowledge of expected sample requirements, throughput and prediction

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HE, Qing-Yu, Anne B. MASON, and Robert C. WOODWORTH. "Spectrophotometric titration with cobalt(III) for the determination of accurate absorption coefficients of transferrins." Biochemical Journal 318, no. 1 (1996): 145–48. http://dx.doi.org/10.1042/bj3180145.

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A rapid and sensitive technique, involving difference spectral titration with cobalt(III), to measure the ϵ values of chicken ovotransferrin, human serum transferrin, the N-lobe of human transferrin and several single point mutants is reported. The resulting ϵ values were compared with the values calculated from the equation proposed by Pace, Vajdos, Fee, Grimsley and Gray [(1995) Protein Sci. 4, 2411–2423]. The titrations with cobalt feature sharp break-points and do not destroy the protein samples. The choice of buffer was found to be important, depending on the metal-binding avidity of the

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Wang, Xiaohan, Kai Zheng, Yi Si, Xuhong Guo, and Yisheng Xu. "Protein–Polyelectrolyte Interaction: Thermodynamic Analysis Based on the Titration Method †." Polymers 11, no. 1 (2019): 82. http://dx.doi.org/10.3390/polym11010082.

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This review discussed the mechanisms including theories and binding stages concerning the protein–polyelectrolyte (PE) interaction, as well as the applications for both complexation and coacervation states of protein–PE pairs. In particular, this review focused on the applications of titration techniques, that is, turbidimetric titration and isothermal titration calorimetry (ITC), in understanding the protein–PE binding process. To be specific, by providing thermodynamic information such as pHc, pHφ, binding constant, entropy, and enthalpy change, titration techniques could shed light on the b

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Pierce, Michael M., C. S. Raman, and Barry T. Nall. "Isothermal Titration Calorimetry of Protein–Protein Interactions." Methods 19, no. 2 (1999): 213–21. http://dx.doi.org/10.1006/meth.1999.0852.

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Lin, Yanchun, and Michael L. Gross. "Mass Spectrometry-Based Structural Proteomics for Metal Ion/Protein Binding Studies." Biomolecules 12, no. 1 (2022): 135. http://dx.doi.org/10.3390/biom12010135.

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Metal ions are critical for the biological and physiological functions of many proteins. Mass spectrometry (MS)-based structural proteomics is an ever-growing field that has been adopted to study protein and metal ion interactions. Native MS offers information on metal binding and its stoichiometry. Footprinting approaches coupled with MS, including hydrogen/deuterium exchange (HDX), “fast photochemical oxidation of proteins” (FPOP) and targeted amino-acid labeling, identify binding sites and regions undergoing conformational changes. MS-based titration methods, including “protein–ligand inter

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Maiolo, Daniele, Paolo Bergese, Eugene Mahon, Kenneth A. Dawson, and Marco P. Monopoli. "Surfactant Titration of Nanoparticle–Protein Corona." Analytical Chemistry 86, no. 24 (2014): 12055–63. http://dx.doi.org/10.1021/ac5027176.

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Berisio, R., V. S. Lamzin, F. Sica, K. S. Wilson, A. Zagari, and L. Mazzarella. "Protein titration in the crystal state." Journal of Molecular Biology 292, no. 4 (1999): 845–54. http://dx.doi.org/10.1006/jmbi.1999.3093.

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Karshikoff, Andrej. "A simple algorithm for the calculation of multiple site titration curves." "Protein Engineering, Design and Selection" 8, no. 3 (1995): 243–48. http://dx.doi.org/10.1093/protein/8.3.243.

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Ngo, Ha-Thanh, and Thomas Bechtold. "Analysis of the Fibroin Solution State in Calcium Chloride/Water/Ethanol for Improved Understanding of the Regeneration Process." Fibres and Textiles in Eastern Europe 26, no. 6(132) (2018): 43–50. http://dx.doi.org/10.5604/01.3001.0012.5174.

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Shaping of fibroin protein from Bombyx mori from calcium chloride/water/ethanol solution is of high interest for the manufacturing of biocompatible structures. Potentiometric titration experiments of the dissolved state permit new insight into the solution state of fibroin as a basis for improved regeneration. Titration experiments and infrared spectroscopy of the solution state support the model of an ion-rich hydration layer and interaction of the solvent with charged and polar groups of the fibroin, rather than through formation of defined calcium complexes. The potentiometric titration cur

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Hicks, Pamela S., Christopher L. Andrews, and David G. Bear. "Quantitative analysis of the cooperativity of protein-nucleic acid interactions by electron microscopy." Proceedings, annual meeting, Electron Microscopy Society of America 44 (August 1986): 308–9. http://dx.doi.org/10.1017/s042482010014316x.

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It is common for sing1e-stranded nucleic acid finding proteins to bind polynucleotides cooperatively. The parameter ω is used to describe the component of the association binding constant that is due to cooperative interactions between protein molecules on the polynucleotide lattice; ω is 1 for noncooperative binding, while ω can be as high as 103-104 for highly cooperative proteins such as bacteriophage T4 gene 32 protein. In the past, to has been determined by computer fitting of spectroscopic titration data. It has been suggested that electrom microscopy would provide a more direct method f

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Dissertations / Theses on the topic "Protein titration"

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Rabenstein, Björn. "Monte Carlo methods for simulation of protein folding and titration." [S.l. : s.n.], 2000. http://www.diss.fu-berlin.de/2000/124/index.html.

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Walker, Karen Nicola. "Protein engineering and characterisation of an IgG-binding domain based upon protein G from Streptococcus group G." Thesis, University of Southampton, 1994. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.296376.

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Marklund, Erik. "Gas-Phase Protein Structure Under the Computational Microscope : Hydration, Titration, and Temperature." Doctoral thesis, Uppsala universitet, Beräknings- och systembiologi, 2011. http://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-151006.

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Although the native environment of the vast majority of proteins is a complex aqueous solution, like the interior of a cell, many analysis methods for assessing chemical and physical properties of biomolecules require the sample to be aerosolized; that is, transferred to the gas-phase. An important example is electrospray-ionization mass spectrometry, which can provide a wide range of information about e.g. biomolecules. That includes structural features, charged sites, and gas-phase equilibrium constants of reactions. To date much of the microscopic detail about the aerosolization process rem

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Wahlberg, Elisabet. "Structure determination and thermodynamic stabilization of an engineered protein-protein complex." Doctoral thesis, KTH, Skolan för bioteknologi (BIO), 2006. http://urn.kb.se/resolve?urn=urn:nbn:se:kth:diva-4230.

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The interaction between two 6 kDa proteins has been investigated. The studied complex of micromolar affinity (Kd) consists of the Z domain derived from staphylococcal protein A and the related protein ZSPA-1, belonging to a group of binding proteins denoted affibody molecules generated via combinatorial engineering of the Z domain. Affibody-target protein complexes are good model systems for structural and thermodynamic studies of protein-protein interactions. With the Z:ZSPA-1 pair as a starting point, we determined the solution structure of the complex and carried out a preliminary character

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Papadopoulou, Athina. "The application of capillary electrophoresis, isothermal titration calorimetry and fluorescence spectroscopy for the study of protein-polyphenol interactions." Thesis, University of Reading, 2005. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.430942.

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Fleischer, Candace C. "A molecular snapshot of charged nanoparticles in the cellular environment." Diss., Georgia Institute of Technology, 2014. http://hdl.handle.net/1853/53632.

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Nanoparticles are promising platforms for biomedical applications ranging from diagnostic tools to therapeutic delivery agents. During the course of these applications, nanoparticles are exposed to a complex mixture of extracellular serum proteins that nonspecifically adsorb onto the surface. The resulting protein layer, or protein "corona," creates an interface between nanoparticles and the biological environment. Protecting the nanoparticle surface can reduce protein adsorption, but complete inhibition remains a challenge. As a result, the corona, rather than the nanoparticle itself, mediate

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Dewan, Nitika. "Elucidation of Thermodynamic Parameters for a Host Cell Protein Acting on a HIV-1 Splicing Regulatory Element." Miami University / OhioLINK, 2011. http://rave.ohiolink.edu/etdc/view?acc_num=miami1323022700.

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Gava, Lisandra Marques 1982. "Caracterização e interação do domínio C-terminal da chaperona Hsp90 humana e das co-chaperonas Tom 70 e Hop." [s.n.], 2011. http://repositorio.unicamp.br/jspui/handle/REPOSIP/314027.

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Orientador: Carlos Henrique Inácio Ramos<br>Tese (doutorado) - Universidade Estadual de Campinas, Instituto de Biologia<br>Made available in DSpace on 2018-08-18T21:37:15Z (GMT). No. of bitstreams: 1 Gava_LisandraMarques_D.pdf: 9573403 bytes, checksum: 4d69a29d08ffc20e4544b876f131fb0d (MD5) Previous issue date: 2011<br>Resumo: A função biológica das proteínas está relacionada à sua estrutura tridimensional adquirida pelo processo de enovelamento protéico. Neste contexto, proteínas denominadas, genericamente, de chaperonas moleculares exercem papel fundamental atuando no auxílio do enovelamen

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Xu, Shenyuan. "Nuclear Magnetic Resonance Spectroscopy Studies of At2g44920, a Pentapeptide Repeat Protein from Arabidopsis thaliana and X-ray Crystallography, Isothermal Titration Calorimetry Studies of K-Ras, a Human Oncogenic GTP-ase Signaling Protein." Miami University / OhioLINK, 2017. http://rave.ohiolink.edu/etdc/view?acc_num=miami1500896385881469.

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Dong, Jian. "Photochemical and Photophysical Studies of Synthetic Derivatives of the Green Fluorescent Protein Chromophore." Diss., Georgia Institute of Technology, 2008. http://hdl.handle.net/1853/24655.

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We have synthesized dimethyl derivatives of the GFP chromophore (p-HOBDI) and several of its derivatives, and their photochemistry and photophysics were investigated using various steady-state and time-resolved techniques as follows. We first consider the effect of the £]-barrel on the optical properties of the GFP chromophore (p-HOBDI) experimentally by selective variation of the protonation state of chromophores and different solvents. Each of these forms shows a complex solvatochromic behavior and is governed by both polar and acid/base properties of the solvents. In contrast to their sol

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Book chapters on the topic "Protein titration"

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Damian, Luminita. "Isothermal Titration Calorimetry for Studying Protein–Ligand Interactions." In Protein-Ligand Interactions. Humana Press, 2013. http://dx.doi.org/10.1007/978-1-62703-398-5_4.

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Ladbury, John E., and Mark A. Williams. "Application of Isothermal Titration Calorimetry in Exploring the Extended Interface." In Protein Interactions. Springer US, 2007. http://dx.doi.org/10.1007/978-0-387-35966-3_8.

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Velazquez-Campoy, Adrian, Stephanie A. Leavitt, and Ernesto Freire. "Characterization of Protein-Protein Interactions by Isothermal Titration Calorimetry." In Methods in Molecular Biology. Springer New York, 2015. http://dx.doi.org/10.1007/978-1-4939-2425-7_11.

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Brown, Haley A., and Nicole M. Koropatkin. "Isothermal Titration Calorimetry for Quantification of Protein–Carbohydrate Interactions." In Methods in Molecular Biology. Springer US, 2023. http://dx.doi.org/10.1007/978-1-0716-3151-5_9.

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Malpeli, Giorgio, Claudia Folli, Davide Cavazzini, Giovanni Sartori, and Rodolfo Berni. "Purification and Fluorescent Titration of Cellular Retinol-Binding Protein." In Retinoid Protocols. Humana Press, 1998. http://dx.doi.org/10.1385/0-89603-438-0:111.

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Dutta, Amit K., Krishna Mohan Sepuru, Jörg Rösgen, and Krishna Rajarathnam. "Characterizing Thermodynamics of Protein-Glycosaminoglycan Interactions Using Isothermal Titration." In Methods in Molecular Biology. Springer US, 2021. http://dx.doi.org/10.1007/978-1-0716-1398-6_25.

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Swamy, Musti J., Rajeshwer S. Sankhala, and Bhanu Pratap Singh. "Thermodynamic Analysis of Protein–Lipid Interactions by Isothermal Titration Calorimetry." In Methods in Molecular Biology. Springer New York, 2019. http://dx.doi.org/10.1007/978-1-4939-9512-7_4.

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Ramirez, Juan, and Yves Nominé. "High-Quality Data of Protein/Peptide Interaction by Isothermal Titration Calorimetry." In Methods in Molecular Biology. Springer New York, 2019. http://dx.doi.org/10.1007/978-1-4939-9179-2_8.

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Swamy, Musti J., and Rajeshwer S. Sankhala. "Probing the Thermodynamics of Protein–Lipid Interactions by Isothermal Titration Calorimetry." In Methods in Molecular Biology. Humana Press, 2012. http://dx.doi.org/10.1007/978-1-62703-275-9_3.

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Mellor, Desirae A., Javier O. Sanlley, and Michael Burkart. "Using NMR Titration Experiments to Study E. coli FAS-II- and AcpP-Mediated Protein–Protein Interactions." In Methods in Molecular Biology. Springer US, 2023. http://dx.doi.org/10.1007/978-1-0716-3214-7_3.

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Conference papers on the topic "Protein titration"

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Kindi, Anwaar Al, Monica Fernandez, Ashrf Masaud Abunaga, Hecham M. Ali, and Emilya Abdullayeva. "New Test Method for Measurement of Water-Soluble Corrosion Inhibitor Residual in Oil Samples for Low Water-Cut Oil Systems." In CORROSION 2021. AMPP, 2021. https://doi.org/10.5006/c2021-16344.

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Abstract Organic corrosion inhibitors protect the metal by forming a hydrophobic film on the metal surface, which provides a barrier to the dissolution of the metal in the electrolyte. To sustain the protective film, a certain minimum inhibitor concentration should be maintained in the solution, usually designated as corrosion inhibitor residual. If the residual falls below the minimum concentration, then the adsorbed layer will start to degrade leaving the carbon steel surface unprotected. Globally, water-soluble corrosion inhibitor residuals are measured from water sample. For low water-cut

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Silu Zhang, Pengyuan Zang, Yuchen Liang, and Walter Hu. "Determination of protein titration curves using Si Nanograting FETs." In 2014 IEEE 14th International Conference on Nanotechnology (IEEE-NANO). IEEE, 2014. http://dx.doi.org/10.1109/nano.2014.6968097.

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Sathanur, Arun V., and Nathan A. Baker. "A clustering-based biased Monte Carlo approach to protein titration curve prediction." In 2020 19th IEEE International Conference on Machine Learning and Applications (ICMLA). IEEE, 2020. http://dx.doi.org/10.1109/icmla51294.2020.00037.

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KÖhlin, A., and J. Stenflo. "HIGH AFFINITY CALCIUM BINDING TO DOMAINES OF PROTEIN C THAT ARE HOMOLOGUS TO THE EPIDERMAL GROWTH FACTOR." In XIth International Congress on Thrombosis and Haemostasis. Schattauer GmbH, 1987. http://dx.doi.org/10.1055/s-0038-1643645.

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In addition to γ-carboxyglutamic acid (Gla)-dependent calcium binding all of the vitamin K-dependent plasma proteins, except prothrombin, have one or two high affinity calcium binding sites that do not require the Gla residues. A common denominator among these proteins (factors IX, X, protein C, protein Z and protein S) is that they have domaines that are homologus to the epidermal growth factor (EGF) precursor. In factors VII,IX,X, protein C and in protein Z the aminoterminal of two EGF homology regions contain one residue of β-hydroxyaspartic acid (Hya) whereas in protein S the aminoterminal

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Dyr, J. E., H. Fořtová, J. Suttnar, Z. Vorlová, and F. Kornalxk. "ISOLATION OF HUMAN PROTEIN C AND ITS SNAKE VENOM ACTIVATORS BY ION EXCHANGE HIGH PERFORMANCE LIQUID CHROMATOGRAPHY." In XIth International Congress on Thrombosis and Haemostasis. Schattauer GmbH, 1987. http://dx.doi.org/10.1055/s-0038-1644896.

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Simple and efficient methods for the purification of functionally active clotting factors in good yields are still missing. The purpose of the present study was to design a chromatographic procedure for the isolation of protein C (PC) and its snake venom activators taking advantage of the high resolution, high speed of analysis and sensitive detection of high performance liquid chromatography.PC was purified from a human plasma concentrate containing vitamin Kdependent proteins using a Mono Q anion exchanger. Electrophoretic titration curve was used to serve as a guide for finding approximate

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Jovanović-Šanta, Suzana S., Aleksandar M. Oklješa, Antos B. Sachanka, Yaraslau U. Dzichenka, and Sergei A. Usanov. "17-SUBSTITUTED STEROIDAL TETRAZOLES – NOVEL LIGANDS FOR HUMAN STEROID-CONVERTING CYP ENZYMES." In 1st INTERNATIONAL Conference on Chemo and BioInformatics. Institute for Information Technologies, University of Kragujevac, 2021. http://dx.doi.org/10.46793/iccbi21.336js.

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In animal and human organisms, there are many enzymes, members of the family of heme- containing proteins, cytochromes P450 (CYPs), included in the biosynthesis and metabolism of many biomolecules, as cholesterol, bile acids, sex, and corticosteroid hormones, as well as in metabolism of drugs and xenobiotics. It is also well-known that different imidazole and triazole derivatives are efficient inhibitors of CYPs activity. In this study, we present in vitro screening of binding of novel androstane derivatives with tetrazole- containing substituents in position 17 to human recombinant steroid-co

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Orthner, Carolyn L., Prabir Bhattacharya, and Dudley K. Strikland. "PURIFICATION AND CHARACTERIZATION OF A PROTEIN C ACTIVATOR FROM THE VENOM OF AGKISTRODON CONTORTRIX CONTORTRIX." In XIth International Congress on Thrombosis and Haemostasis. Schattauer GmbH, 1987. http://dx.doi.org/10.1055/s-0038-1643813.

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There are two recent reports on the purification and properties of a protein C activator (PCA) from the venom of the Southern copperhead snalce. The purification of a 37,000 Mr nonenzymatic PCA (Martinoli and Stocker, Thrcmb. Res. 43, 253, 1976) as well as of a 20,000 Mr thrombin-like enzyme (Klein and Walker, Biochem. ,25, 4175, 1986) have been described. The purpose of this investigation was to purify and further characterize the PCA(s) from this vencm. A PCA has been isolated by sulphopropyl-Sephadex followed by gel filtration chromatography resulting in approximately a 100-fold purificatio

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Kostić, Marina, Vera M. Divac, Sven Mangelinckx, and Jovana S. Marjanović. "BSA binding of 2-(aminomethyl)cyclopropane-1,1-dicarboxylic acid." In 2nd International Conference on Chemo and Bioinformatics. Institute for Information Technologies, University of Kragujevac, 2023. http://dx.doi.org/10.46793/iccbi23.459k.

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Herein, we present the results of the study devoted to the exploration of BSA binding of 2-(aminomethyl)cyclopropane-1,1-dicarboxylic acid, as an example of constrained γ-amino dicarboxylic acid, and, taking into consideration that the effectiveness of a potential drug depends on its ability to bind to a protein carrier and in that way enable transfer through the blood stream. For the investigation of binding properties, we used the fluorescence emission titration of BSA with a synthesized compound. Considering that the BSA solution shows an intensive fluorescence emission around 360 nm, a dec

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Milović, Emilija, Nenad Janković, Jelena Petronijević, and Nenad Joksimović. "CHEMICO-BIOLOGICAL INTERACTION OF SELECTED TETRAHYDROPYRIMIDINES." In 1st INTERNATIONAL Conference on Chemo and BioInformatics. Institute for Information Technologies, University of Kragujevac, 2021. http://dx.doi.org/10.46793/iccbi21.347m.

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Tetrahydropyrimidines (THPMs) attracted attention as a very important class of aza heterocycles with broad pharmacological activities during the past years. In many studies have been proven that THPMs have anticancer, anti-inflammatory, antimicrobial, antioxidant, antifungal, anti-HIV activity. Bearing in mind our interest in medicinal and Biginelli chemistry, we investigated interaction with important biomacromolecules (DNA, BSA) and our earlier synthetized THPMs derivatives with proven very good cytotoxic activity.[1] Investigation of affinity of compounds A and B (Figure 1) to bind to bovin

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Das, Dr Debashree. "A Fluorescent Heterobimetallic IrIII-PdII Complex (HBMC) Selectively Images Cancer Cells." In 8th World Conference on Chemistry and Chemical Engineering and 8th World Conference on Advanced Materials, Nanoscience and Nanotechnology. Eurasia Conferences, 2025. https://doi.org/10.62422/978-81-981865-7-7-018.

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Early detection and treatment of cancer cell is the only way to eradicate cancer in patients and this can be efficiently achieved via fluorescence imaging technique. Henceforth, we present a fluorescent heterobimetallic complex (HBMC) of Ir(III)/Pd(II) which selectively images the nucleus of the cancer cells over normal cells at a very low concentration (12 μM), established by confocal laser scanning microscopy. HBMC has a unique property by virtue of which it is selectively taken up by cancer cells (HeLa) and hence allows selective imaging of cancer cells over normal cells (HaCat). However, t

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Reports on the topic "Protein titration"

1

Engmann, J., H. W. Blanch, and J. M. Prausnitz. Protein-salt binding data from potentiometric titrations of lysozyme in aqueous solutions containing KCl. Office of Scientific and Technical Information (OSTI), 1997. http://dx.doi.org/10.2172/486115.

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Fergg, F., D. E. Kuehner, H. W. Blanch, and J. M. Prausnitz. Hydrogen-ion titrations of amino acids and proteins in solutions containing concentrated electrolyte. Office of Scientific and Technical Information (OSTI), 1994. http://dx.doi.org/10.2172/10124599.

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